RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 WNK4Q96J92 1243 aa20.38■□□□□ 0.85
PTPRA-206ENST00000430705 MEIS3Q99687 375 aa20.38■□□□□ 0.85
PTPRA-206ENST00000430705 LRRFIP2Q9Y608 721 aaKnown RBP20.38■□□□□ 0.85
PTPRA-206ENST00000430705 UBTFL1P0CB47 393 aaPredicted RBP20.37■□□□□ 0.85
PTPRA-206ENST00000430705 CAVIN4Q5BKX8 364 aa20.37■□□□□ 0.85
PTPRA-206ENST00000430705 ZNF296Q8WUU4 475 aaPredicted RBP20.37■□□□□ 0.85
PTPRA-206ENST00000430705 API5Q9BZZ5 524 aaKnown RBP20.37■□□□□ 0.85
PTPRA-206ENST00000430705 TNNQ9UQP3 1299 aa20.37■□□□□ 0.85
PTPRA-206ENST00000430705 RGS19P49795 217 aa20.36■□□□□ 0.85
PTPRA-206ENST00000430705 SREBF2Q12772 1141 aa20.36■□□□□ 0.85
PTPRA-206ENST00000430705 CFHR5Q9BXR6 569 aa20.36■□□□□ 0.85
PTPRA-206ENST00000430705 TMEM39BQ9GZU3 492 aa20.36■□□□□ 0.85
PTPRA-206ENST00000430705 SIL1Q9H173 461 aa20.36■□□□□ 0.85
PTPRA-206ENST00000430705 PA2G4Q9UQ80 394 aaKnown RBP20.36■□□□□ 0.85
PTPRA-206ENST00000430705 TCP10L2B9ZVM9 353 aa20.35■□□□□ 0.85
PTPRA-206ENST00000430705 PPP1R12BO60237 982 aaPredicted RBP20.35■□□□□ 0.85
PTPRA-206ENST00000430705 CACNB3P54284 484 aa20.35■□□□□ 0.85
PTPRA-206ENST00000430705 SUPT20HL1Q3ZLR7 823 aa20.35■□□□□ 0.85
PTPRA-206ENST00000430705 CTU1Q7Z7A3 348 aaKnown RBP20.35■□□□□ 0.85
PTPRA-206ENST00000430705 TBC1D22AQ8WUA7 517 aa20.35■□□□□ 0.85
PTPRA-206ENST00000430705 LPIN2Q92539 896 aa20.35■□□□□ 0.85
PTPRA-206ENST00000430705 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.35■□□□□ 0.85
PTPRA-206ENST00000430705 IGF2BP3O00425 579 aaKnown RBP eCLIP20.34■□□□□ 0.85
PTPRA-206ENST00000430705 CIAO1O76071 339 aa20.34■□□□□ 0.85
PTPRA-206ENST00000430705 IFIT1P09914 478 aaKnown RBP20.34■□□□□ 0.85
PTPRA-206ENST00000430705 ZBTB48P10074 688 aaPredicted RBP20.34■□□□□ 0.85
PTPRA-206ENST00000430705 HDLBPQ00341 1268 aaKnown RBP20.34■□□□□ 0.85
PTPRA-206ENST00000430705 GPR25O00155 361 aa20.33■□□□□ 0.85
PTPRA-206ENST00000430705 FRAT2O75474 233 aaPredicted RBP20.33■□□□□ 0.85
PTPRA-206ENST00000430705 SLC5A1P13866 664 aa20.33■□□□□ 0.85
PTPRA-206ENST00000430705 TNFAIP1Q13829 316 aa20.33■□□□□ 0.85
PTPRA-206ENST00000430705 NOM1Q5C9Z4 860 aaKnown RBP20.33■□□□□ 0.85
PTPRA-206ENST00000430705 INTS3Q68E01 1043 aaKnown RBP20.33■□□□□ 0.85
PTPRA-206ENST00000430705 APOBEC3HQ6NTF7 200 aaKnown RBP20.33■□□□□ 0.85
PTPRA-206ENST00000430705 TEKT1Q969V4 418 aa20.33■□□□□ 0.85
PTPRA-206ENST00000430705 SLC10A4Q96EP9 437 aa20.33■□□□□ 0.85
PTPRA-206ENST00000430705 ZDHHC15Q96MV8 337 aa20.33■□□□□ 0.85
PTPRA-206ENST00000430705 UNCXA6NJT0 531 aa20.32■□□□□ 0.84
PTPRA-206ENST00000430705 IREB2P48200 963 aaKnown RBP20.32■□□□□ 0.84
PTPRA-206ENST00000430705 ATP2B3Q16720 1220 aa20.32■□□□□ 0.84
PTPRA-206ENST00000430705 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.32■□□□□ 0.84
PTPRA-206ENST00000430705 IFNL1Q8IU54 200 aa20.32■□□□□ 0.84
PTPRA-206ENST00000430705 FBXO3Q9UK99 471 aa20.32■□□□□ 0.84
PTPRA-206ENST00000430705 MANSC4A6NHS7 340 aaPredicted RBP20.31■□□□□ 0.84
PTPRA-206ENST00000430705 ANKRD13AQ8IZ07 590 aa20.31■□□□□ 0.84
PTPRA-206ENST00000430705 CNKSR2Q8WXI2 1034 aa20.31■□□□□ 0.84
PTPRA-206ENST00000430705 ARHGAP45Q92619 1136 aa20.31■□□□□ 0.84
PTPRA-206ENST00000430705 ELP3Q9H9T3 547 aa20.31■□□□□ 0.84
PTPRA-206ENST00000430705 COPRSQ9NQ92 184 aa20.31■□□□□ 0.84
PTPRA-206ENST00000430705 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.31■□□□□ 0.84
PTPRA-206ENST00000430705 BCAR3O75815 825 aa20.3■□□□□ 0.84
PTPRA-206ENST00000430705 TRIM27P14373 513 aa20.3■□□□□ 0.84
PTPRA-206ENST00000430705 ADORA1P30542 326 aa20.3■□□□□ 0.84
PTPRA-206ENST00000430705 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.3■□□□□ 0.84
PTPRA-206ENST00000430705 MRIQ9BWK5 157 aa20.3■□□□□ 0.84
PTPRA-206ENST00000430705 SUGT1Q9Y2Z0 365 aa20.3■□□□□ 0.84
PTPRA-206ENST00000430705 PRDX5P30044 214 aa20.29■□□□□ 0.84
PTPRA-206ENST00000430705 PHKA1P46020 1223 aa20.29■□□□□ 0.84
PTPRA-206ENST00000430705 VGLL4Q14135 290 aa20.29■□□□□ 0.84
PTPRA-206ENST00000430705 PTPN18Q99952 460 aa20.29■□□□□ 0.84
PTPRA-206ENST00000430705 RPAP1Q9BWH6 1393 aaPredicted RBP20.29■□□□□ 0.84
PTPRA-206ENST00000430705 MAST3O60307 1309 aa20.28■□□□□ 0.84
PTPRA-206ENST00000430705 CENPFP49454 3210 aa20.28■□□□□ 0.84
PTPRA-206ENST00000430705 IL15P40933 162 aaPredicted RBP20.28■□□□□ 0.84
PTPRA-206ENST00000430705 MTX1Q13505 466 aa20.28■□□□□ 0.84
PTPRA-206ENST00000430705 DIXDC1Q155Q3 683 aa20.28■□□□□ 0.84
PTPRA-206ENST00000430705 HHIPL2Q6UWX4 724 aa20.28■□□□□ 0.84
PTPRA-206ENST00000430705 OPTNQ96CV9 577 aa20.28■□□□□ 0.84
PTPRA-206ENST00000430705 CEP126Q9P2H0 1117 aa20.28■□□□□ 0.84
PTPRA-206ENST00000430705 HPS5Q9UPZ3 1129 aa20.28■□□□□ 0.84
PTPRA-206ENST00000430705 DAGLAQ9Y4D2 1042 aa20.28■□□□□ 0.84
PTPRA-206ENST00000430705 TESPA1A2RU30 521 aaPredicted RBP20.27■□□□□ 0.84
PTPRA-206ENST00000430705 TNNI2P48788 182 aa20.27■□□□□ 0.84
PTPRA-206ENST00000430705 SOX10P56693 466 aa20.27■□□□□ 0.84
PTPRA-206ENST00000430705 FAM83AQ86UY5 434 aa20.27■□□□□ 0.84
PTPRA-206ENST00000430705 WDR66Q8TBY9 1149 aa20.27■□□□□ 0.84
PTPRA-206ENST00000430705 MS4A4AQ96JQ5 239 aa20.27■□□□□ 0.84
PTPRA-206ENST00000430705 SALL1Q9NSC2 1324 aa20.27■□□□□ 0.83
PTPRA-206ENST00000430705 FKTNO75072 461 aa20.26■□□□□ 0.83
PTPRA-206ENST00000430705 INHBEP58166 350 aa20.26■□□□□ 0.83
PTPRA-206ENST00000430705 CAP1Q01518 475 aa20.26■□□□□ 0.83
PTPRA-206ENST00000430705 MLLT1Q03111 559 aaPredicted RBP20.26■□□□□ 0.83
PTPRA-206ENST00000430705 FKBP1CQ5VVH2 108 aa20.26■□□□□ 0.83
PTPRA-206ENST00000430705 SNCAIPQ9Y6H5 919 aa20.26■□□□□ 0.83
PTPRA-206ENST00000430705 RFX7Q2KHR2 1363 aa20.25■□□□□ 0.83
PTPRA-206ENST00000430705 ZBTB22O15209 634 aa20.25■□□□□ 0.83
PTPRA-206ENST00000430705 ALDH1A1P00352 501 aa20.25■□□□□ 0.83
PTPRA-206ENST00000430705 ATF7IPQ6VMQ6 1270 aa20.25■□□□□ 0.83
PTPRA-206ENST00000430705 MIER1Q8N108 512 aa20.25■□□□□ 0.83
PTPRA-206ENST00000430705 SRGAP3O43295 1099 aa20.24■□□□□ 0.83
PTPRA-206ENST00000430705 GNAI3P08754 354 aa20.24■□□□□ 0.83
PTPRA-206ENST00000430705 MAP3K9P80192 1104 aa20.24■□□□□ 0.83
PTPRA-206ENST00000430705 NFIAQ12857 509 aa20.24■□□□□ 0.83
PTPRA-206ENST00000430705 CRHR2Q13324 411 aa20.24■□□□□ 0.83
PTPRA-206ENST00000430705 CCDC102BQ68D86 513 aa20.24■□□□□ 0.83
PTPRA-206ENST00000430705 CDC42EP5Q6NZY7 148 aa20.24■□□□□ 0.83
PTPRA-206ENST00000430705 BRI3BPQ8WY22 251 aa20.24■□□□□ 0.83
PTPRA-206ENST00000430705 BRCA2P51587 3418 aa20.24■□□□□ 0.83
PTPRA-206ENST00000430705 DOCK2Q92608 1830 aa20.24■□□□□ 0.83
PTPRA-206ENST00000430705 MYH2Q9UKX2 1941 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms