RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.23■□□□□ 0.03
USP40-205ENST00000430158 TBC1D22AQ8WUA7 517 aa15.23■□□□□ 0.03
USP40-205ENST00000430158 IQCA1LA6NCM1 817 aa15.22■□□□□ 0.03
USP40-205ENST00000430158 IFIT2P09913 472 aaKnown RBP15.22■□□□□ 0.03
USP40-205ENST00000430158 MMP14P50281 582 aa15.22■□□□□ 0.03
USP40-205ENST00000430158 CCDC158Q5M9N0 1113 aa15.22■□□□□ 0.03
USP40-205ENST00000430158 ANKRD45Q5TZF3 282 aa15.22■□□□□ 0.03
USP40-205ENST00000430158 KIAA0825Q8IV33 1275 aa15.22■□□□□ 0.03
USP40-205ENST00000430158 ZNF384Q8TF68 577 aa15.22■□□□□ 0.03
USP40-205ENST00000430158 FBXW7Q969H0 707 aa15.22■□□□□ 0.03
USP40-205ENST00000430158 SUGT1Q9Y2Z0 365 aa15.22■□□□□ 0.03
USP40-205ENST00000430158 CYP2E1P05181 493 aaPredicted RBP15.21■□□□□ 0.03
USP40-205ENST00000430158 POTEJP0CG39 1038 aa15.21■□□□□ 0.03
USP40-205ENST00000430158 ATP5JP18859 108 aa15.21■□□□□ 0.03
USP40-205ENST00000430158 TTC39AQ5SRH9 613 aa15.21■□□□□ 0.03
USP40-205ENST00000430158 SAMD7Q7Z3H4 446 aa15.21■□□□□ 0.03
USP40-205ENST00000430158 MTMR14Q8NCE2 650 aa15.21■□□□□ 0.03
USP40-205ENST00000430158 MRIQ9BWK5 157 aa15.21■□□□□ 0.03
USP40-205ENST00000430158 SNRKQ9NRH2 765 aa15.21■□□□□ 0.03
USP40-205ENST00000430158 ADARB2Q9NS39 739 aaKnown RBP15.21■□□□□ 0.03
USP40-205ENST00000430158 PGAP2Q9UHJ9 254 aa15.21■□□□□ 0.03
USP40-205ENST00000430158 DOCK2Q92608 1830 aa15.2■□□□□ 0.02
USP40-205ENST00000430158 MYH2Q9UKX2 1941 aa15.2■□□□□ 0.02
USP40-205ENST00000430158 H7C1D1 291 aa15.2■□□□□ 0.02
USP40-205ENST00000430158 FRAT2O75474 233 aaPredicted RBP15.2■□□□□ 0.02
USP40-205ENST00000430158 LMOD1P29536 600 aaPredicted RBP15.2■□□□□ 0.02
USP40-205ENST00000430158 PRDX5P30044 214 aa15.2■□□□□ 0.02
USP40-205ENST00000430158 ZAP70P43403 619 aa15.2■□□□□ 0.02
USP40-205ENST00000430158 ERICH6BQ5W0A0 696 aa15.2■□□□□ 0.02
USP40-205ENST00000430158 TBC1D9Q6ZT07 1266 aa15.2■□□□□ 0.02
USP40-205ENST00000430158 STAP2Q9UGK3 403 aa15.2■□□□□ 0.02
USP40-205ENST00000430158 PCDHAC2Q9Y5I4 1007 aa15.2■□□□□ 0.02
USP40-205ENST00000430158 NDUFB9Q9Y6M9 179 aa15.2■□□□□ 0.02
USP40-205ENST00000430158 AOX1Q06278 1338 aa15.19■□□□□ 0.02
USP40-205ENST00000430158 HDLBPQ00341 1268 aaKnown RBP15.19■□□□□ 0.02
USP40-205ENST00000430158 USP50Q70EL3 339 aaPredicted RBP15.19■□□□□ 0.02
USP40-205ENST00000430158 CHD1LQ86WJ1 897 aa15.19■□□□□ 0.02
USP40-205ENST00000430158 MYOZ2Q9NPC6 264 aa15.19■□□□□ 0.02
USP40-205ENST00000430158 PIH1D3Q9NQM4 214 aaKnown RBP15.19■□□□□ 0.02
USP40-205ENST00000430158 ECHDC1Q9NTX5 307 aa15.19■□□□□ 0.02
USP40-205ENST00000430158 TBC1D10BQ4KMP7 808 aaPredicted RBP15.18■□□□□ 0.02
USP40-205ENST00000430158 B4GALNT3Q6L9W6 998 aa15.18■□□□□ 0.02
USP40-205ENST00000430158 PNMA8AQ86V59 439 aaPredicted RBP15.18■□□□□ 0.02
USP40-205ENST00000430158 ZNF579Q8NAF0 562 aaKnown RBP15.18■□□□□ 0.02
USP40-205ENST00000430158 PI4K2BQ8TCG2 481 aa15.18■□□□□ 0.02
USP40-205ENST00000430158 HAUS7Q99871 368 aa15.18■□□□□ 0.02
USP40-205ENST00000430158 LNPKQ9C0E8 428 aa15.18■□□□□ 0.02
USP40-205ENST00000430158 ANTXR1Q9H6X2 564 aa15.18■□□□□ 0.02
USP40-205ENST00000430158 TTF2Q9UNY4 1162 aaKnown RBP15.18■□□□□ 0.02
USP40-205ENST00000430158 ASTN2O75129 1339 aaPredicted RBP15.17■□□□□ 0.02
USP40-205ENST00000430158 TTC41PQ6P2S7 1318 aa15.17■□□□□ 0.02
USP40-205ENST00000430158 ECM29Q5VYK3 1845 aa15.17■□□□□ 0.02
USP40-205ENST00000430158 F8W031 263 aaPredicted RBP15.17■□□□□ 0.02
USP40-205ENST00000430158 NEFLP07196 543 aa15.17■□□□□ 0.02
USP40-205ENST00000430158 PDE4AP27815 886 aa15.17■□□□□ 0.02
USP40-205ENST00000430158 KIF4BQ2VIQ3 1234 aa15.17■□□□□ 0.02
USP40-205ENST00000430158 TSHZ3Q63HK5 1081 aa15.17■□□□□ 0.02
USP40-205ENST00000430158 HHIPL2Q6UWX4 724 aa15.17■□□□□ 0.02
USP40-205ENST00000430158 SERPINA10Q9UK55 444 aa15.17■□□□□ 0.02
USP40-205ENST00000430158 WNT10BO00744 389 aa15.16■□□□□ 0.02
USP40-205ENST00000430158 LDHBP07195 334 aaKnown RBP15.16■□□□□ 0.02
USP40-205ENST00000430158 MX1P20591 662 aa15.16■□□□□ 0.02
USP40-205ENST00000430158 CRKP46108 304 aa15.16■□□□□ 0.02
USP40-205ENST00000430158 PDE1AP54750 535 aa15.16■□□□□ 0.02
USP40-205ENST00000430158 NBPF9Q3BBW0 867 aa15.16■□□□□ 0.02
USP40-205ENST00000430158 CFAP100Q494V2 611 aa15.16■□□□□ 0.02
USP40-205ENST00000430158 LDHDQ86WU2 507 aa15.16■□□□□ 0.02
USP40-205ENST00000430158 PLEKHM2Q8IWE5 1019 aa15.16■□□□□ 0.02
USP40-205ENST00000430158 OGFOD1Q8N543 542 aa15.16■□□□□ 0.02
USP40-205ENST00000430158 ZGPATQ8N5A5 531 aaKnown RBP15.16■□□□□ 0.02
USP40-205ENST00000430158 ZC3H15Q8WU90 426 aaKnown RBP15.16■□□□□ 0.02
USP40-205ENST00000430158 NSUN4Q96CB9 384 aaKnown RBP15.16■□□□□ 0.02
USP40-205ENST00000430158 EDC3Q96F86 508 aaKnown RBP15.16■□□□□ 0.02
USP40-205ENST00000430158 FAM163AQ96GL9 167 aaPredicted RBP15.16■□□□□ 0.02
USP40-205ENST00000430158 PRMT6Q96LA8 375 aaPredicted RBP15.16■□□□□ 0.02
USP40-205ENST00000430158 BCL11AQ9H165 835 aa15.16■□□□□ 0.02
USP40-205ENST00000430158 BOLA2Q9H3K6 86 aa15.16■□□□□ 0.02
USP40-205ENST00000430158 GAKO14976 1311 aa15.16■□□□□ 0.02
USP40-205ENST00000430158 IGSF3O75054 1194 aa15.15■□□□□ 0.02
USP40-205ENST00000430158 TOMM70O94826 608 aa15.15■□□□□ 0.02
USP40-205ENST00000430158 MECOMQ03112 1051 aa15.15■□□□□ 0.02
USP40-205ENST00000430158 DIXDC1Q155Q3 683 aa15.15■□□□□ 0.02
USP40-205ENST00000430158 RBM26Q5T8P6 1007 aaKnown RBP15.15■□□□□ 0.02
USP40-205ENST00000430158 SPTY2D1Q68D10 685 aaPredicted RBP15.15■□□□□ 0.02
USP40-205ENST00000430158 APOBEC3HQ6NTF7 200 aaKnown RBP15.15■□□□□ 0.02
USP40-205ENST00000430158 RBM46Q8TBY0 533 aaKnown RBP15.15■□□□□ 0.02
USP40-205ENST00000430158 ZDHHC15Q96MV8 337 aa15.15■□□□□ 0.02
USP40-205ENST00000430158 OSBPL3Q9H4L5 887 aa15.15■□□□□ 0.02
USP40-205ENST00000430158 ABCF2Q9UG63 623 aa15.15■□□□□ 0.02
USP40-205ENST00000430158 HDAC9Q9UKV0 1011 aa15.15■□□□□ 0.02
USP40-205ENST00000430158 MYH7P12883 1935 aa15.15■□□□□ 0.02
USP40-205ENST00000430158 ITGBL1O95965 494 aaPredicted RBP15.14■□□□□ 0.01
USP40-205ENST00000430158 EAPPQ56P03 285 aaPredicted RBP15.14■□□□□ 0.01
USP40-205ENST00000430158 ERICH6Q7L0X2 663 aa15.14■□□□□ 0.01
USP40-205ENST00000430158 CENPQQ7L2Z9 268 aaPredicted RBP15.14■□□□□ 0.01
USP40-205ENST00000430158 DAGLAQ9Y4D2 1042 aa15.14■□□□□ 0.01
USP40-205ENST00000430158 MAST3O60307 1309 aa15.14■□□□□ 0.01
USP40-205ENST00000430158 MAST2Q6P0Q8 1798 aa15.13■□□□□ 0.01
USP40-205ENST00000430158 DLGAP5Q15398 846 aa15.13■□□□□ 0.01
USP40-205ENST00000430158 TEKT1Q969V4 418 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms