RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 OSBPL3Q9H4L5 887 aa18.22■□□□□ 0.51
GARNL3-204ENST00000429629 ARAP2Q8WZ64 1704 aa18.22■□□□□ 0.51
GARNL3-204ENST00000429629 GLRX3O76003 335 aaKnown RBP18.21■□□□□ 0.51
GARNL3-204ENST00000429629 LDHCP07864 332 aa18.21■□□□□ 0.51
GARNL3-204ENST00000429629 PRDX5P30044 214 aa18.21■□□□□ 0.51
GARNL3-204ENST00000429629 GSTO1P78417 241 aa18.21■□□□□ 0.51
GARNL3-204ENST00000429629 FSTL1Q12841 308 aa18.21■□□□□ 0.51
GARNL3-204ENST00000429629 GRIK5Q16478 980 aa18.21■□□□□ 0.51
GARNL3-204ENST00000429629 PI16Q6UXB8 463 aa18.21■□□□□ 0.51
GARNL3-204ENST00000429629 TEKT1Q969V4 418 aa18.21■□□□□ 0.51
GARNL3-204ENST00000429629 ABCF2Q9UG63 623 aa18.21■□□□□ 0.51
GARNL3-204ENST00000429629 SCN4AP35499 1836 aa18.21■□□□□ 0.51
GARNL3-204ENST00000429629 AOX1Q06278 1338 aa18.21■□□□□ 0.51
GARNL3-204ENST00000429629 SHTN1A0MZ66 631 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 SPDYE2BA6NHP3 402 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 WNT10BO00744 389 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 MAP4K4O95819 1239 aaPredicted RBP18.2■□□□□ 0.5
GARNL3-204ENST00000429629 SPDYE6P0CI01 402 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 CRKP46108 304 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 TBC1D10BQ4KMP7 808 aaPredicted RBP18.2■□□□□ 0.5
GARNL3-204ENST00000429629 B4GALNT3Q6L9W6 998 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 CHADLQ6NUI6 762 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 TRPM4Q8TD43 1214 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 LNPKQ9C0E8 428 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 SNRKQ9NRH2 765 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 PPP4R2Q9NY27 417 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 LRP2BPQ9P2M1 347 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 PITPNM2Q9BZ72 1349 aa18.2■□□□□ 0.5
GARNL3-204ENST00000429629 PDE1AP54750 535 aa18.19■□□□□ 0.5
GARNL3-204ENST00000429629 CFAP100Q494V2 611 aa18.19■□□□□ 0.5
GARNL3-204ENST00000429629 SMC1BQ8NDV3 1235 aa18.19■□□□□ 0.5
GARNL3-204ENST00000429629 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
GARNL3-204ENST00000429629 NSUN4Q96CB9 384 aaKnown RBP18.19■□□□□ 0.5
GARNL3-204ENST00000429629 CCDC136Q96JN2 1154 aa18.19■□□□□ 0.5
GARNL3-204ENST00000429629 BOLA2Q9H3K6 86 aa18.19■□□□□ 0.5
GARNL3-204ENST00000429629 GAKO14976 1311 aa18.19■□□□□ 0.5
GARNL3-204ENST00000429629 PSME4Q14997 1843 aa18.19■□□□□ 0.5
GARNL3-204ENST00000429629 F8W031 263 aaPredicted RBP18.18■□□□□ 0.5
GARNL3-204ENST00000429629 MYO1BO43795 1136 aa18.18■□□□□ 0.5
GARNL3-204ENST00000429629 EGFRP00533 1210 aa18.18■□□□□ 0.5
GARNL3-204ENST00000429629 MAP3K12Q12852 859 aa18.18■□□□□ 0.5
GARNL3-204ENST00000429629 EAPPQ56P03 285 aaPredicted RBP18.18■□□□□ 0.5
GARNL3-204ENST00000429629 RBM26Q5T8P6 1007 aaKnown RBP18.18■□□□□ 0.5
GARNL3-204ENST00000429629 TBC1D9Q6ZT07 1266 aa18.18■□□□□ 0.5
GARNL3-204ENST00000429629 DZIP1Q86YF9 867 aaKnown RBP18.18■□□□□ 0.5
GARNL3-204ENST00000429629 PAG1Q9NWQ8 432 aa18.18■□□□□ 0.5
GARNL3-204ENST00000429629 MECOMQ03112 1051 aa18.17■□□□□ 0.5
GARNL3-204ENST00000429629 FKBP1CQ5VVH2 108 aa18.17■□□□□ 0.5
GARNL3-204ENST00000429629 APOBEC3HQ6NTF7 200 aaKnown RBP18.17■□□□□ 0.5
GARNL3-204ENST00000429629 CDC37L1Q7L3B6 337 aa18.17■□□□□ 0.5
GARNL3-204ENST00000429629 CERS3Q8IU89 383 aa18.17■□□□□ 0.5
GARNL3-204ENST00000429629 PLEKHM2Q8IWE5 1019 aa18.17■□□□□ 0.5
GARNL3-204ENST00000429629 OTUD7AQ8TE49 926 aaPredicted RBP18.17■□□□□ 0.5
GARNL3-204ENST00000429629 PRMT6Q96LA8 375 aaPredicted RBP18.17■□□□□ 0.5
GARNL3-204ENST00000429629 PIH1D3Q9NQM4 214 aaKnown RBP18.17■□□□□ 0.5
GARNL3-204ENST00000429629 CLEC11AQ9Y240 323 aa18.17■□□□□ 0.5
GARNL3-204ENST00000429629 GPR75-ASB3A0A0A6YYF3 556 aa18.16■□□□□ 0.5
GARNL3-204ENST00000429629 NBPF9Q3BBW0 867 aa18.16■□□□□ 0.5
GARNL3-204ENST00000429629 DCPSQ96C86 337 aaKnown RBP18.16■□□□□ 0.5
GARNL3-204ENST00000429629 RAI14Q9P0K7 980 aa18.16■□□□□ 0.5
GARNL3-204ENST00000429629 GOLIM4O00461 696 aa18.15■□□□□ 0.5
GARNL3-204ENST00000429629 POTEIP0CG38 1075 aa18.15■□□□□ 0.5
GARNL3-204ENST00000429629 POTEJP0CG39 1038 aa18.15■□□□□ 0.5
GARNL3-204ENST00000429629 RBM5P52756 815 aaKnown RBP eCLIP18.15■□□□□ 0.5
GARNL3-204ENST00000429629 PPP4CP60510 307 aa18.15■□□□□ 0.5
GARNL3-204ENST00000429629 LRRFIP1Q32MZ4 808 aaKnown RBP18.15■□□□□ 0.5
GARNL3-204ENST00000429629 NAA16Q6N069 864 aaPredicted RBP18.15■□□□□ 0.5
GARNL3-204ENST00000429629 CNTROBQ8N137 903 aa18.15■□□□□ 0.5
GARNL3-204ENST00000429629 ZNF384Q8TF68 577 aa18.15■□□□□ 0.5
GARNL3-204ENST00000429629 DNAJC2Q99543 621 aaKnown RBP18.15■□□□□ 0.5
GARNL3-204ENST00000429629 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.15■□□□□ 0.5
GARNL3-204ENST00000429629 BCL11AQ9H165 835 aa18.15■□□□□ 0.5
GARNL3-204ENST00000429629 ANTXR1Q9H6X2 564 aa18.15■□□□□ 0.5
GARNL3-204ENST00000429629 DAGLAQ9Y4D2 1042 aa18.15■□□□□ 0.5
GARNL3-204ENST00000429629 ITGBL1O95965 494 aaPredicted RBP18.14■□□□□ 0.49
GARNL3-204ENST00000429629 SPDYE2Q495Y8 402 aa18.14■□□□□ 0.49
GARNL3-204ENST00000429629 ZSCAN25Q6NSZ9 544 aa18.14■□□□□ 0.49
GARNL3-204ENST00000429629 APOBEC3FQ8IUX4 373 aaKnown RBP18.14■□□□□ 0.49
GARNL3-204ENST00000429629 KBTBD3Q8NAB2 608 aa18.14■□□□□ 0.49
GARNL3-204ENST00000429629 MROH7-TTC4A0A0A0MT08 1334 aa18.14■□□□□ 0.49
GARNL3-204ENST00000429629 ZNF646O15015 1829 aaPredicted RBP18.14■□□□□ 0.49
GARNL3-204ENST00000429629 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
GARNL3-204ENST00000429629 IDH1O75874 414 aaKnown RBP18.13■□□□□ 0.49
GARNL3-204ENST00000429629 TNFAIP1Q13829 316 aa18.13■□□□□ 0.49
GARNL3-204ENST00000429629 UBE3CQ15386 1083 aa18.13■□□□□ 0.49
GARNL3-204ENST00000429629 DIXDC1Q155Q3 683 aa18.13■□□□□ 0.49
GARNL3-204ENST00000429629 ANGEL2Q5VTE6 544 aaKnown RBP18.13■□□□□ 0.49
GARNL3-204ENST00000429629 ZNF70Q9UC06 446 aaPredicted RBP18.13■□□□□ 0.49
GARNL3-204ENST00000429629 PPP2R3BQ9Y5P8 575 aa18.13■□□□□ 0.49
GARNL3-204ENST00000429629 BAG3O95817 575 aa18.12■□□□□ 0.49
GARNL3-204ENST00000429629 ZFYP08048 801 aaPredicted RBP18.12■□□□□ 0.49
GARNL3-204ENST00000429629 PLCG2P16885 1265 aa18.12■□□□□ 0.49
GARNL3-204ENST00000429629 SLC9C2Q5TAH2 1124 aa18.12■□□□□ 0.49
GARNL3-204ENST00000429629 FAM83AQ86UY5 434 aa18.12■□□□□ 0.49
GARNL3-204ENST00000429629 SULF1Q8IWU6 871 aa18.12■□□□□ 0.49
GARNL3-204ENST00000429629 EVI5LQ96CN4 794 aa18.12■□□□□ 0.49
GARNL3-204ENST00000429629 GGA3Q9NZ52 723 aa18.12■□□□□ 0.49
GARNL3-204ENST00000429629 NDUFB9Q9Y6M9 179 aa18.12■□□□□ 0.49
GARNL3-204ENST00000429629 PDE4AP27815 886 aa18.11■□□□□ 0.49
GARNL3-204ENST00000429629 MAP1SQ66K74 1059 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms