RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CTNNA3Q9UI47 895 aa9.35□□□□□ -0.91
HPS4-205ENST00000429411 CEMIPQ8WUJ3 1361 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 IL15P40933 162 aaPredicted RBP9.34□□□□□ -0.91
HPS4-205ENST00000429411 ZAP70P43403 619 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 SYNE4Q8N205 404 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 NSUN7Q8NE18 718 aaKnown RBP9.34□□□□□ -0.91
HPS4-205ENST00000429411 AIFM3Q96NN9 605 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 ERICH4A6NGS2 130 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 EYA2O00167 538 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 CYP27B1O15528 508 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 RESTQ13127 1097 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 PDIA6Q15084 440 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 SLC4A8Q2Y0W8 1093 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 GRIPAP1Q4V328 841 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 KLHL10Q6JEL2 608 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 PLBD2Q8NHP8 589 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 HAUS7Q99871 368 aa9.34□□□□□ -0.91
HPS4-205ENST00000429411 SPTLC2O15270 562 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 MNS1Q8NEH6 495 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 AIDAQ96BJ3 306 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 ABCF2Q9UG63 623 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 TBC1D2BQ9UPU7 963 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 CLIC4Q9Y696 253 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 ADD1P35611 737 aaKnown RBP9.33□□□□□ -0.92
HPS4-205ENST00000429411 FAM160A1Q05DH4 1040 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 OLFM4Q6UX06 510 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 XAGE2Q96GT9 111 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 ALG1Q9BT22 464 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 GOLPH3LQ9H4A5 285 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 TRMT112Q9UI30 125 aaKnown RBP9.33□□□□□ -0.92
HPS4-205ENST00000429411 MINDY4BA8MYZ0 360 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 B4E1Z4 1266 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 M0R2C6 588 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 CTAGE5O15320 804 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 PDIA3P30101 505 aaKnown RBP9.33□□□□□ -0.92
HPS4-205ENST00000429411 METAP2P50579 478 aaKnown RBP eCLIP9.33□□□□□ -0.92
HPS4-205ENST00000429411 NDUFA8P51970 172 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 ATP2B3Q16720 1220 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 CC2D2BQ6DHV5 1058 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 BICDL1Q6ZP65 573 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 CMTR1Q8N1G2 835 aaKnown RBP9.33□□□□□ -0.92
HPS4-205ENST00000429411 RASSF8Q8NHQ8 419 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 NCOA7Q8NI08 942 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 OSBP2Q969R2 916 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 SLC26A6Q9BXS9 759 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.33□□□□□ -0.92
HPS4-205ENST00000429411 PCDHA7Q9UN72 937 aa9.33□□□□□ -0.92
HPS4-205ENST00000429411 MAST3O60307 1309 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 USP27XA6NNY8 438 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 TDO2P48775 406 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 AKAP17AQ02040 695 aaKnown RBP9.32□□□□□ -0.92
HPS4-205ENST00000429411 GOLGA8FQ08AF8 430 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 GOLGA8DPQ0D2H9 430 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 KIF18AQ8NI77 898 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 CPLX3Q8WVH0 158 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 XIRP1Q702N8 1843 aaKnown RBP9.32□□□□□ -0.92
HPS4-205ENST00000429411 SNAP23O00161 211 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 URI1O94763 535 aaPredicted RBP9.32□□□□□ -0.92
HPS4-205ENST00000429411 SAFBQ15424 915 aaKnown RBP eCLIP9.32□□□□□ -0.92
HPS4-205ENST00000429411 SYT10Q6XYQ8 523 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 ZSWIM4Q9H7M6 989 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 ASAP1Q9ULH1 1129 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 IFIT3O14879 490 aaKnown RBP9.32□□□□□ -0.92
HPS4-205ENST00000429411 GPAA1O43292 621 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 FGAP02671 866 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 SNW1Q13573 536 aaKnown RBP9.32□□□□□ -0.92
HPS4-205ENST00000429411 DPCR1Q3MIW9 517 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 FUCA2Q9BTY2 467 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 PDGFDQ9GZP0 370 aaPredicted RBP9.32□□□□□ -0.92
HPS4-205ENST00000429411 INCENPQ9NQS7 918 aa9.32□□□□□ -0.92
HPS4-205ENST00000429411 CCNL1Q9UK58 526 aaPredicted RBP9.32□□□□□ -0.92
HPS4-205ENST00000429411 ZNF609O15014 1411 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 GOLGA8AA7E2F4 631 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 PFKFB2O60825 505 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 SYKP43405 635 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 TMEM67Q5HYA8 995 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 NBPF14Q5TI25 921 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 CNNM3Q8NE01 707 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 NAPBQ9H115 298 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 AKAP2Q9Y2D5 859 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 ELP1O95163 1332 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 MON2Q7Z3U7 1717 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 ERICH2A1L162 156 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 ZNF710Q8N1W2 664 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 XPO4Q9C0E2 1151 aaKnown RBP9.31□□□□□ -0.92
HPS4-205ENST00000429411 DNAI1Q9UI46 699 aa9.31□□□□□ -0.92
HPS4-205ENST00000429411 USP42Q9H9J4 1324 aaKnown RBP9.31□□□□□ -0.92
HPS4-205ENST00000429411 hCG_1642624A0A1W2PR95 340 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 IARSP41252 1262 aaKnown RBP9.3□□□□□ -0.92
HPS4-205ENST00000429411 ELF2Q15723 593 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 DNAJC10Q8IXB1 793 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 MIGA1Q8NAN2 632 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 CLIC6Q96NY7 704 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 MPHOSPH8Q99549 860 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 PUS7LQ9H0K6 701 aaKnown RBP9.3□□□□□ -0.92
HPS4-205ENST00000429411 HELLSQ9NRZ9 838 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 ZNF215Q9UL58 517 aaPredicted RBP9.3□□□□□ -0.92
HPS4-205ENST00000429411 COL16A1Q07092 1604 aaPredicted RBP9.3□□□□□ -0.92
HPS4-205ENST00000429411 ATP6V1AP38606 617 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 SCARF1Q14162 830 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms