RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 PPP1R1BQ9UD71 204 aaPredicted RBP15.23■□□□□ 0.03
HMGB3P4-201ENST00000428776 CDK5RAP2Q96SN8 1893 aa15.23■□□□□ 0.03
HMGB3P4-201ENST00000428776 GPAA1O43292 621 aa15.22■□□□□ 0.03
HMGB3P4-201ENST00000428776 LDHBP07195 334 aaKnown RBP15.22■□□□□ 0.03
HMGB3P4-201ENST00000428776 HSPD1P10809 573 aaKnown RBP15.22■□□□□ 0.03
HMGB3P4-201ENST00000428776 CYP7A1P22680 504 aa15.22■□□□□ 0.03
HMGB3P4-201ENST00000428776 MECOMQ03112 1051 aa15.22■□□□□ 0.03
HMGB3P4-201ENST00000428776 PODNQ7Z5L7 613 aa15.22■□□□□ 0.03
HMGB3P4-201ENST00000428776 AIDAQ96BJ3 306 aa15.22■□□□□ 0.03
HMGB3P4-201ENST00000428776 NSUN4Q96CB9 384 aaKnown RBP15.22■□□□□ 0.03
HMGB3P4-201ENST00000428776 VPS33BQ9H267 617 aa15.22■□□□□ 0.03
HMGB3P4-201ENST00000428776 ZKSCAN1P17029 563 aaPredicted RBP15.21■□□□□ 0.03
HMGB3P4-201ENST00000428776 KIAA2012Q0VF49 1180 aa15.21■□□□□ 0.03
HMGB3P4-201ENST00000428776 DOK7Q18PE1 504 aa15.21■□□□□ 0.03
HMGB3P4-201ENST00000428776 KLHL34Q8N239 644 aa15.21■□□□□ 0.03
HMGB3P4-201ENST00000428776 STRBPQ96SI9 672 aaKnown RBP15.21■□□□□ 0.03
HMGB3P4-201ENST00000428776 PALD1Q9ULE6 856 aa15.21■□□□□ 0.03
HMGB3P4-201ENST00000428776 SNX14Q9Y5W7 946 aa15.21■□□□□ 0.03
HMGB3P4-201ENST00000428776 BAZ2AQ9UIF9 1905 aaKnown RBP15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 GNAT2P19087 354 aa15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 PRDX5P30044 214 aa15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 GTF2IP78347 998 aa15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 GSTO1P78417 241 aa15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 BECN1Q14457 450 aa15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 TSGA10IPQ3SY00 556 aa15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 CREB3L3Q68CJ9 461 aa15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 DZIP1Q86YF9 867 aaKnown RBP15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 CTNNA3Q9UI47 895 aa15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 JAG2Q9Y219 1238 aa15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 SUGT1Q9Y2Z0 365 aa15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 FOCADQ5VW36 1801 aa15.2■□□□□ 0.02
HMGB3P4-201ENST00000428776 MAGEB6P1A0A0J9YX57 407 aa15.19■□□□□ 0.02
HMGB3P4-201ENST00000428776 SLC27A2O14975 620 aa15.19■□□□□ 0.02
HMGB3P4-201ENST00000428776 MBD4O95243 580 aa15.19■□□□□ 0.02
HMGB3P4-201ENST00000428776 LDHCP07864 332 aa15.19■□□□□ 0.02
HMGB3P4-201ENST00000428776 MFSD14BQ5SR56 506 aa15.19■□□□□ 0.02
HMGB3P4-201ENST00000428776 VPS53Q5VIR6 699 aa15.19■□□□□ 0.02
HMGB3P4-201ENST00000428776 TTLL5Q6EMB2 1281 aa15.19■□□□□ 0.02
HMGB3P4-201ENST00000428776 RASEFQ8IZ41 740 aa15.19■□□□□ 0.02
HMGB3P4-201ENST00000428776 ZNF384Q8TF68 577 aa15.19■□□□□ 0.02
HMGB3P4-201ENST00000428776 SNX21Q969T3 373 aa15.19■□□□□ 0.02
HMGB3P4-201ENST00000428776 RPAP1Q9BWH6 1393 aaPredicted RBP15.19■□□□□ 0.02
HMGB3P4-201ENST00000428776 ECM29Q5VYK3 1845 aa15.19■□□□□ 0.02
HMGB3P4-201ENST00000428776 PATL2C9JE40 543 aaKnown RBP15.18■□□□□ 0.02
HMGB3P4-201ENST00000428776 PPIP5K2O43314 1243 aa15.18■□□□□ 0.02
HMGB3P4-201ENST00000428776 ECE2O60344 883 aa15.18■□□□□ 0.02
HMGB3P4-201ENST00000428776 FKBP1AP62942 108 aaKnown RBP15.18■□□□□ 0.02
HMGB3P4-201ENST00000428776 ALX1Q15699 326 aa15.18■□□□□ 0.02
HMGB3P4-201ENST00000428776 AOC3Q16853 763 aa15.18■□□□□ 0.02
HMGB3P4-201ENST00000428776 ADGRA1Q86SQ6 560 aa15.18■□□□□ 0.02
HMGB3P4-201ENST00000428776 SLF2Q8IX21 1173 aa15.18■□□□□ 0.02
HMGB3P4-201ENST00000428776 ARMT1Q9H993 441 aa15.18■□□□□ 0.02
HMGB3P4-201ENST00000428776 DBNDD1Q9H9R9 158 aa15.18■□□□□ 0.02
HMGB3P4-201ENST00000428776 ZMYM6O95789 1325 aa15.17■□□□□ 0.02
HMGB3P4-201ENST00000428776 FOXP2O15409 715 aa15.17■□□□□ 0.02
HMGB3P4-201ENST00000428776 ST18O60284 1047 aa15.17■□□□□ 0.02
HMGB3P4-201ENST00000428776 KRT32Q14532 448 aa15.17■□□□□ 0.02
HMGB3P4-201ENST00000428776 MIGA1Q8NAN2 632 aa15.17■□□□□ 0.02
HMGB3P4-201ENST00000428776 RIOK1Q9BRS2 568 aaKnown RBP15.17■□□□□ 0.02
HMGB3P4-201ENST00000428776 TM6SF1Q9BZW5 370 aa15.17■□□□□ 0.02
HMGB3P4-201ENST00000428776 DAXXQ9UER7 740 aaPredicted RBP15.17■□□□□ 0.02
HMGB3P4-201ENST00000428776 DICER1Q9UPY3 1922 aaKnown RBP15.17■□□□□ 0.02
HMGB3P4-201ENST00000428776 LAMB1P07942 1786 aa15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 FGAP02671 866 aa15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 APPP05067 770 aa15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 PSMA5P28066 241 aa15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 NEK4P51957 841 aa15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 GRIK5Q16478 980 aa15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 IMMTQ16891 758 aaKnown RBP15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 STRIP1Q5VSL9 837 aa15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 CERS3Q8IU89 383 aa15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 LCORLQ8N3X6 602 aa15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 FBXW7Q969H0 707 aa15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 FAM163AQ96GL9 167 aaPredicted RBP15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 NACAP1Q9BZK3 213 aa15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 SLC4A4Q9Y6R1 1079 aa15.16■□□□□ 0.02
HMGB3P4-201ENST00000428776 MYH1P12882 1939 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 NAV1Q8NEY1 1877 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 USP17L3A6NCW0 530 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 USP17L4A6NCW7 530 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 GSG1L2A8MUP6 293 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 CYP21A2P08686 494 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 USP17L1Q7RTZ2 530 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 HSCBQ8IWL3 235 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 LARGE2Q8N3Y3 721 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 NLGN2Q8NFZ4 835 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 NOL10Q9BSC4 688 aaKnown RBP15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 TBC1D2Q9BYX2 928 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 BCS1LQ9Y276 419 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 MROH7-TTC4A0A0A0MT08 1334 aa15.15■□□□□ 0.02
HMGB3P4-201ENST00000428776 SBF1O95248 1867 aa15.14■□□□□ 0.01
HMGB3P4-201ENST00000428776 BAG3O95817 575 aa15.14■□□□□ 0.01
HMGB3P4-201ENST00000428776 IARSP41252 1262 aaKnown RBP15.14■□□□□ 0.01
HMGB3P4-201ENST00000428776 PPP4CP60510 307 aa15.14■□□□□ 0.01
HMGB3P4-201ENST00000428776 DACT2Q5SW24 774 aa15.14■□□□□ 0.01
HMGB3P4-201ENST00000428776 IFNL3Q8IZI9 196 aa15.14■□□□□ 0.01
HMGB3P4-201ENST00000428776 CERS5Q8N5B7 392 aa15.14■□□□□ 0.01
HMGB3P4-201ENST00000428776 JAKMIP1Q96N16 626 aaKnown RBP15.14■□□□□ 0.01
HMGB3P4-201ENST00000428776 TAOK3Q9H2K8 898 aa15.14■□□□□ 0.01
HMGB3P4-201ENST00000428776 ZSWIM6Q9HCJ5 1215 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms