RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 PRELPP51888 382 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 CATIPQ7Z7H3 387 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 SAGE1Q9NXZ1 904 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 DICER1Q9UPY3 1922 aaKnown RBP8.45□□□□□ -1.06
CNOT4-206ENST00000428680 MAP3K15Q6ZN16 1313 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 BRCA1P38398 1863 aaKnown RBP8.45□□□□□ -1.06
CNOT4-206ENST00000428680 ZBTB24O43167 697 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-206ENST00000428680 GCC1Q96CN9 775 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 ZNF213O14771 459 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 IARSP41252 1262 aaKnown RBP8.45□□□□□ -1.06
CNOT4-206ENST00000428680 RRP1P56182 461 aaKnown RBP8.45□□□□□ -1.06
CNOT4-206ENST00000428680 KRT32Q14532 448 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 BMS1Q14692 1282 aaKnown RBP8.45□□□□□ -1.06
CNOT4-206ENST00000428680 BLOC1S2Q6QNY1 142 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 ARMC9Q7Z3E5 817 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 CCDC12Q8WUD4 166 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-206ENST00000428680 CYP46A1Q9Y6A2 500 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 BAG4O95429 457 aaKnown RBP8.44□□□□□ -1.06
CNOT4-206ENST00000428680 STK38Q15208 465 aa8.44□□□□□ -1.06
CNOT4-206ENST00000428680 PKN2Q16513 984 aaKnown RBP8.44□□□□□ -1.06
CNOT4-206ENST00000428680 C2orf69Q8N8R5 385 aa8.44□□□□□ -1.06
CNOT4-206ENST00000428680 STIM1Q13586 685 aa8.44□□□□□ -1.06
CNOT4-206ENST00000428680 MTHFSDQ2M296 383 aaKnown RBP8.44□□□□□ -1.06
CNOT4-206ENST00000428680 CCDC82Q8N4S0 544 aa8.44□□□□□ -1.06
CNOT4-206ENST00000428680 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.44□□□□□ -1.06
CNOT4-206ENST00000428680 RAB3GAP1Q15042 981 aa8.44□□□□□ -1.06
CNOT4-206ENST00000428680 ANKRD1Q15327 319 aa8.44□□□□□ -1.06
CNOT4-206ENST00000428680 SLC10A5Q5PT55 438 aa8.44□□□□□ -1.06
CNOT4-206ENST00000428680 SPOUT1Q5T280 376 aaKnown RBP8.44□□□□□ -1.06
CNOT4-206ENST00000428680 CHPF2Q9P2E5 772 aa8.44□□□□□ -1.06
CNOT4-206ENST00000428680 PCDH10Q9P2E7 1040 aa8.44□□□□□ -1.06
CNOT4-206ENST00000428680 MAGEC2Q9UBF1 373 aaPredicted RBP8.44□□□□□ -1.06
CNOT4-206ENST00000428680 SIPA1L3O60292 1781 aaPredicted RBP8.44□□□□□ -1.06
CNOT4-206ENST00000428680 IFIT3O14879 490 aaKnown RBP8.44□□□□□ -1.06
CNOT4-206ENST00000428680 HOMER1Q86YM7 354 aa8.44□□□□□ -1.06
CNOT4-206ENST00000428680 TNPO1Q92973 898 aaKnown RBP8.44□□□□□ -1.06
CNOT4-206ENST00000428680 CCDC102AQ96A19 550 aa8.44□□□□□ -1.06
CNOT4-206ENST00000428680 TANGO6Q9C0B7 1094 aa8.44□□□□□ -1.06
CNOT4-206ENST00000428680 RAB11FIP3O75154 756 aa8.43□□□□□ -1.06
CNOT4-206ENST00000428680 TNS4Q8IZW8 715 aa8.43□□□□□ -1.06
CNOT4-206ENST00000428680 CCDC194A0A1B0GVG4 234 aa8.43□□□□□ -1.06
CNOT4-206ENST00000428680 GOLIM4O00461 696 aa8.43□□□□□ -1.06
CNOT4-206ENST00000428680 HIBADHP31937 336 aaKnown RBP8.43□□□□□ -1.06
CNOT4-206ENST00000428680 FAM47CQ5HY64 1035 aa8.43□□□□□ -1.06
CNOT4-206ENST00000428680 CWC27Q6UX04 472 aaKnown RBP8.43□□□□□ -1.06
CNOT4-206ENST00000428680 OLFM4Q6UX06 510 aa8.43□□□□□ -1.06
CNOT4-206ENST00000428680 ADARB2Q9NS39 739 aaKnown RBP8.43□□□□□ -1.06
CNOT4-206ENST00000428680 A0A0G2JLW4 131 aa8.43□□□□□ -1.06
CNOT4-206ENST00000428680 SUPT20HL1Q3ZLR7 823 aa8.43□□□□□ -1.06
CNOT4-206ENST00000428680 PTF1AQ7RTS3 328 aa8.43□□□□□ -1.06
CNOT4-206ENST00000428680 SP8Q8IXZ3 490 aa8.43□□□□□ -1.06
CNOT4-206ENST00000428680 TMEM106CQ9BVX2 250 aa8.43□□□□□ -1.06
CNOT4-206ENST00000428680 STK3Q13188 491 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 TMEM266Q2M3C6 531 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 CCDC178Q5BJE1 867 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 TEX11Q8IYF3 940 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 FAM89AQ96GI7 184 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 RSPH6AQ9H0K4 717 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 CAMTA2O94983 1202 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 PRR5LQ6MZQ0 368 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 AEBP1Q8IUX7 1158 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 SRGNP10124 158 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 CCDC150Q8NCX0 1101 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 EXOC6Q8TAG9 804 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 ARHGEF10LQ9HCE6 1279 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 MCM9Q9NXL9 1143 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 POTEJP0CG39 1038 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 IL15P40933 162 aaPredicted RBP8.42□□□□□ -1.06
CNOT4-206ENST00000428680 PAGR1Q9BTK6 254 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 PPP2R3BQ9Y5P8 575 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 CNTNAP1P78357 1384 aa8.42□□□□□ -1.06
CNOT4-206ENST00000428680 A1BGP04217 495 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 ZYXQ15942 572 aaKnown RBP8.41□□□□□ -1.06
CNOT4-206ENST00000428680 KSR2Q6VAB6 950 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 SMARCC2Q8TAQ2 1214 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 DPF2Q92785 391 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 TCHPQ9BT92 498 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 UBA5Q9GZZ9 404 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 GZF1Q9H116 711 aaPredicted RBP8.41□□□□□ -1.06
CNOT4-206ENST00000428680 RRAGCQ9HB90 399 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 CHMP5Q9NZZ3 219 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 SLC12A7Q9Y666 1083 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 PPEF1O14829 653 aaPredicted RBP8.41□□□□□ -1.06
CNOT4-206ENST00000428680 NEK4P51957 841 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 MFSD6Q6ZSS7 791 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 ZBTB1Q9Y2K1 713 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 BACH1O14867 736 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 ALDH1A1P00352 501 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 NLRP5P59047 1200 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 RPS8P62241 208 aaKnown RBP8.41□□□□□ -1.06
CNOT4-206ENST00000428680 DDR1Q08345 913 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 SKIV2LQ15477 1246 aaKnown RBP8.41□□□□□ -1.06
CNOT4-206ENST00000428680 CCDC70Q6NSX1 233 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 PRPF40BQ6NWY9 871 aaKnown RBP8.41□□□□□ -1.06
CNOT4-206ENST00000428680 TBC1D22AQ8WUA7 517 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 GINS2Q9Y248 185 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 CCDC173Q0VFZ6 552 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 SLC10A4Q96EP9 437 aa8.41□□□□□ -1.06
CNOT4-206ENST00000428680 ZNF396Q96N95 335 aaPredicted RBP8.41□□□□□ -1.06
CNOT4-206ENST00000428680 AS3MTQ9HBK9 375 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms