RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 PLCG2P16885 1265 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 USPL1Q5W0Q7 1092 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 NCOA5Q9HCD5 579 aaKnown RBP11.08□□□□□ -0.64
SNX13-203ENST00000428135 NLRP1Q9C000 1473 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 PTPDC1A2A3K4 754 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 PDIA4P13667 645 aaKnown RBP11.08□□□□□ -0.64
SNX13-203ENST00000428135 LMAN1P49257 510 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 PUM3Q15397 648 aaKnown RBP11.08□□□□□ -0.64
SNX13-203ENST00000428135 TGFBRAP1Q8WUH2 860 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 EDC3Q96F86 508 aaKnown RBP11.08□□□□□ -0.64
SNX13-203ENST00000428135 CCDC171Q6TFL3 1326 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 KDM5DQ9BY66 1539 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 PPIP5K2O43314 1243 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 GNAQP50148 359 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 TNNI3KQ59H18 835 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 DACT1Q9NYF0 836 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 FPGT-TNNI3KV9GXZ4 949 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 HECW2Q9P2P5 1572 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 SPECC1Q5M775 1068 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 SPAG5Q96R06 1193 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 CRACR2AQ9BSW2 395 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 EDC4Q6P2E9 1401 aaKnown RBP11.07□□□□□ -0.64
SNX13-203ENST00000428135 SETD1BQ9UPS6 1966 aaKnown RBP11.07□□□□□ -0.64
SNX13-203ENST00000428135 EYA2O00167 538 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 UBE2HP62256 183 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 HOOK3Q86VS8 718 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 MBD5Q9P267 1494 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 EIF3JO75822 258 aaKnown RBP11.07□□□□□ -0.64
SNX13-203ENST00000428135 SCNN1DP51172 638 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 UBASH3AP57075 661 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 GTF2IP78347 998 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 PLEKHM2Q8IWE5 1019 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 AOPEPQ8N6M6 819 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 DNAJC25Q9H1X3 360 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 VWA3AA6NCI4 1184 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 TRIM75PA6NK02 468 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 KRT13P13646 458 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 ARHGEF12Q9NZN5 1544 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 KIAA0754O94854 1291 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 GNAT2P19087 354 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 EN1Q05925 392 aaPredicted RBP11.07□□□□□ -0.64
SNX13-203ENST00000428135 TMOD4Q9NZQ9 345 aa11.07□□□□□ -0.64
SNX13-203ENST00000428135 SOS1Q07889 1333 aaPredicted RBP11.06□□□□□ -0.64
SNX13-203ENST00000428135 PNMA6EA0A0J9YXQ4 647 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 PLEKHG3A1L390 1219 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 PAFAH1B1P43034 410 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 ZSCAN16Q9H4T2 348 aaPredicted RBP11.06□□□□□ -0.64
SNX13-203ENST00000428135 AKR1B10O60218 316 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 FAM47AQ5JRC9 791 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 OTUD7BQ6GQQ9 843 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 C2CD5Q86YS7 1000 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 CWC15Q9P013 229 aaKnown RBP11.06□□□□□ -0.64
SNX13-203ENST00000428135 EZRP15311 586 aaKnown RBP11.06□□□□□ -0.64
SNX13-203ENST00000428135 ZSCAN23Q3MJ62 389 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 KRT79Q5XKE5 535 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 TTLL7Q6ZT98 887 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 TTC6Q86TZ1 520 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 LOC102724428A0A0B4J2F2 783 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 SEC24BO95487 1268 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 PHKG2P15735 406 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 ZAP70P43403 619 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 SIK1P57059 783 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 FAM114A1Q8IWE2 563 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 PROCA1Q8NCQ7 364 aaPredicted RBP11.06□□□□□ -0.64
SNX13-203ENST00000428135 MAPK8IP1Q9UQF2 711 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 NOD1Q9Y239 953 aa11.06□□□□□ -0.64
SNX13-203ENST00000428135 POLR3GO15318 223 aaPredicted RBP11.05□□□□□ -0.64
SNX13-203ENST00000428135 CHMLP26374 656 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 RAD51AP2Q09MP3 1159 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 SMIM5Q71RC9 77 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 DCTPP1Q9H773 170 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 DCAF17Q5H9S7 520 aaPredicted RBP11.05□□□□□ -0.64
SNX13-203ENST00000428135 KIF18AQ8NI77 898 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 POLR3AO14802 1390 aaPredicted RBP11.05□□□□□ -0.64
SNX13-203ENST00000428135 RTL9Q8NET4 1388 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 KANK3Q6NY19 840 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 TBC1D5Q92609 795 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 ERVK-7P63135 1459 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 GPAA1O43292 621 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 MRPS27Q92552 414 aaKnown RBP11.05□□□□□ -0.64
SNX13-203ENST00000428135 ZBTB40Q9NUA8 1239 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 SPTLC2O15270 562 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 EEF2P13639 858 aaKnown RBP11.05□□□□□ -0.64
SNX13-203ENST00000428135 PIK3AP1Q6ZUJ8 805 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 NIM1KQ8IY84 436 aa11.05□□□□□ -0.64
SNX13-203ENST00000428135 PRR36Q9H6K5 1346 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 TCP10L2B9ZVM9 353 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 CCNT1O60563 726 aaKnown RBP11.04□□□□□ -0.64
SNX13-203ENST00000428135 PARP10Q53GL7 1025 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 RUFY3Q7L099 469 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 CMTR1Q8N1G2 835 aaKnown RBP11.04□□□□□ -0.64
SNX13-203ENST00000428135 V9GY48 417 aaPredicted RBP11.04□□□□□ -0.64
SNX13-203ENST00000428135 TTC41PQ6P2S7 1318 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 PARD3Q8TEW0 1356 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 GYG1P46976 350 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 MAP2K1Q02750 393 aaPredicted RBP11.04□□□□□ -0.64
SNX13-203ENST00000428135 DHX32Q7L7V1 743 aaKnown RBP11.04□□□□□ -0.64
SNX13-203ENST00000428135 KCNG4Q8TDN1 519 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 ALS2CR12Q96Q35 445 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 CCDC169A6NNP5 214 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 930.9 ms