RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 TDRD3Q9H7E2 651 aaKnown RBP20.23■□□□□ 0.83
DDR1-234ENST00000424544 VEZTQ9HBM0 779 aa20.23■□□□□ 0.83
DDR1-234ENST00000424544 IQSEC3Q9UPP2 1182 aaPredicted RBP20.23■□□□□ 0.83
DDR1-234ENST00000424544 CCDC85CA6NKD9 419 aa20.22■□□□□ 0.83
DDR1-234ENST00000424544 VPS37DQ86XT2 251 aa20.22■□□□□ 0.83
DDR1-234ENST00000424544 SLC10A4Q96EP9 437 aa20.22■□□□□ 0.83
DDR1-234ENST00000424544 CLMNQ96JQ2 1002 aa20.22■□□□□ 0.83
DDR1-234ENST00000424544 SUGT1Q9Y2Z0 365 aa20.22■□□□□ 0.83
DDR1-234ENST00000424544 ZBTB22O15209 634 aa20.21■□□□□ 0.83
DDR1-234ENST00000424544 CIAO1O76071 339 aa20.21■□□□□ 0.83
DDR1-234ENST00000424544 LPIN2Q92539 896 aa20.21■□□□□ 0.83
DDR1-234ENST00000424544 TBC1D8O95759 1140 aa20.2■□□□□ 0.82
DDR1-234ENST00000424544 IFIT1P09914 478 aaKnown RBP20.2■□□□□ 0.82
DDR1-234ENST00000424544 UBTFL1P0CB47 393 aaPredicted RBP20.2■□□□□ 0.82
DDR1-234ENST00000424544 ZBTB48P10074 688 aaPredicted RBP20.2■□□□□ 0.82
DDR1-234ENST00000424544 INHBEP58166 350 aa20.2■□□□□ 0.82
DDR1-234ENST00000424544 SREBF2Q12772 1141 aa20.2■□□□□ 0.82
DDR1-234ENST00000424544 MKRN3Q13064 507 aaKnown RBP20.2■□□□□ 0.82
DDR1-234ENST00000424544 TNFAIP1Q13829 316 aa20.2■□□□□ 0.82
DDR1-234ENST00000424544 INTS3Q68E01 1043 aaKnown RBP20.2■□□□□ 0.82
DDR1-234ENST00000424544 ZDHHC15Q96MV8 337 aa20.2■□□□□ 0.82
DDR1-234ENST00000424544 R3HDMLQ9H3Y0 253 aa20.2■□□□□ 0.82
DDR1-234ENST00000424544 APOBEC3HQ6NTF7 200 aaKnown RBP20.19■□□□□ 0.82
DDR1-234ENST00000424544 CTU1Q7Z7A3 348 aaKnown RBP20.19■□□□□ 0.82
DDR1-234ENST00000424544 CDAN1Q8IWY9 1227 aa20.19■□□□□ 0.82
DDR1-234ENST00000424544 ZNF296Q8WUU4 475 aaPredicted RBP20.19■□□□□ 0.82
DDR1-234ENST00000424544 WNK4Q96J92 1243 aa20.19■□□□□ 0.82
DDR1-234ENST00000424544 COPRSQ9NQ92 184 aa20.19■□□□□ 0.82
DDR1-234ENST00000424544 MANSC4A6NHS7 340 aaPredicted RBP20.18■□□□□ 0.82
DDR1-234ENST00000424544 GPR25O00155 361 aa20.18■□□□□ 0.82
DDR1-234ENST00000424544 CHAF1AQ13111 956 aaPredicted RBP20.18■□□□□ 0.82
DDR1-234ENST00000424544 HHIPL2Q6UWX4 724 aa20.18■□□□□ 0.82
DDR1-234ENST00000424544 MEIS3Q99687 375 aa20.18■□□□□ 0.82
DDR1-234ENST00000424544 HDAC5Q9UQL6 1122 aa20.18■□□□□ 0.82
DDR1-234ENST00000424544 LRRFIP2Q9Y608 721 aaKnown RBP20.18■□□□□ 0.82
DDR1-234ENST00000424544 ARAP2Q8WZ64 1704 aa20.18■□□□□ 0.82
DDR1-234ENST00000424544 TESPA1A2RU30 521 aaPredicted RBP20.17■□□□□ 0.82
DDR1-234ENST00000424544 GJA5P36382 358 aa20.17■□□□□ 0.82
DDR1-234ENST00000424544 IREB2P48200 963 aaKnown RBP20.17■□□□□ 0.82
DDR1-234ENST00000424544 FKBP1CQ5VVH2 108 aa20.17■□□□□ 0.82
DDR1-234ENST00000424544 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.17■□□□□ 0.82
DDR1-234ENST00000424544 ANKRD13AQ8IZ07 590 aa20.17■□□□□ 0.82
DDR1-234ENST00000424544 TEKT1Q969V4 418 aa20.17■□□□□ 0.82
DDR1-234ENST00000424544 FRAT2O75474 233 aaPredicted RBP20.16■□□□□ 0.82
DDR1-234ENST00000424544 ALDH1A1P00352 501 aa20.16■□□□□ 0.82
DDR1-234ENST00000424544 SLC5A1P13866 664 aa20.16■□□□□ 0.82
DDR1-234ENST00000424544 IL15P40933 162 aaPredicted RBP20.16■□□□□ 0.82
DDR1-234ENST00000424544 IFNL1Q8IU54 200 aa20.16■□□□□ 0.82
DDR1-234ENST00000424544 TMEM39BQ9GZU3 492 aa20.16■□□□□ 0.82
DDR1-234ENST00000424544 CEP126Q9P2H0 1117 aa20.16■□□□□ 0.82
DDR1-234ENST00000424544 TCP10L2B9ZVM9 353 aa20.15■□□□□ 0.82
DDR1-234ENST00000424544 MTX1Q13505 466 aa20.15■□□□□ 0.82
DDR1-234ENST00000424544 FAM83AQ86UY5 434 aa20.15■□□□□ 0.82
DDR1-234ENST00000424544 WDR66Q8TBY9 1149 aa20.15■□□□□ 0.82
DDR1-234ENST00000424544 PA2G4Q9UQ80 394 aaKnown RBP20.15■□□□□ 0.82
DDR1-234ENST00000424544 LAMB1P07942 1786 aa20.15■□□□□ 0.82
DDR1-234ENST00000424544 IGF2BP3O00425 579 aaKnown RBP eCLIP20.14■□□□□ 0.81
DDR1-234ENST00000424544 TNNI2P48788 182 aa20.14■□□□□ 0.81
DDR1-234ENST00000424544 PKN2Q16513 984 aaKnown RBP20.14■□□□□ 0.81
DDR1-234ENST00000424544 PTPN18Q99952 460 aa20.14■□□□□ 0.81
DDR1-234ENST00000424544 SIL1Q9H173 461 aa20.14■□□□□ 0.81
DDR1-234ENST00000424544 MAP3K9P80192 1104 aa20.13■□□□□ 0.81
DDR1-234ENST00000424544 ATP2B3Q16720 1220 aa20.13■□□□□ 0.81
DDR1-234ENST00000424544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.13■□□□□ 0.81
DDR1-234ENST00000424544 MS4A4AQ96JQ5 239 aa20.13■□□□□ 0.81
DDR1-234ENST00000424544 MAST3O60307 1309 aa20.12■□□□□ 0.81
DDR1-234ENST00000424544 SALL1Q9NSC2 1324 aa20.12■□□□□ 0.81
DDR1-234ENST00000424544 TRIM27P14373 513 aa20.12■□□□□ 0.81
DDR1-234ENST00000424544 FKTNO75072 461 aa20.11■□□□□ 0.81
DDR1-234ENST00000424544 BCAR3O75815 825 aa20.11■□□□□ 0.81
DDR1-234ENST00000424544 GNAI3P08754 354 aa20.11■□□□□ 0.81
DDR1-234ENST00000424544 CACNB3P54284 484 aa20.11■□□□□ 0.81
DDR1-234ENST00000424544 MLLT1Q03111 559 aaPredicted RBP20.11■□□□□ 0.81
DDR1-234ENST00000424544 SEMA3EO15041 775 aa20.1■□□□□ 0.81
DDR1-234ENST00000424544 IPO8O15397 1037 aaKnown RBP20.1■□□□□ 0.81
DDR1-234ENST00000424544 PHKA1P46020 1223 aa20.1■□□□□ 0.81
DDR1-234ENST00000424544 ATF7IPQ6VMQ6 1270 aa20.1■□□□□ 0.81
DDR1-234ENST00000424544 GNL3LQ9NVN8 582 aaKnown RBP20.1■□□□□ 0.81
DDR1-234ENST00000424544 TNNQ9UQP3 1299 aa20.1■□□□□ 0.81
DDR1-234ENST00000424544 PRDX5P30044 214 aa20.09■□□□□ 0.81
DDR1-234ENST00000424544 TIMM10P62072 90 aa20.09■□□□□ 0.81
DDR1-234ENST00000424544 VGLL4Q14135 290 aa20.09■□□□□ 0.81
DDR1-234ENST00000424544 CNKSR2Q8WXI2 1034 aa20.09■□□□□ 0.81
DDR1-234ENST00000424544 OPTNQ96CV9 577 aa20.09■□□□□ 0.81
DDR1-234ENST00000424544 ELP3Q9H9T3 547 aa20.09■□□□□ 0.81
DDR1-234ENST00000424544 DENND2AQ9ULE3 1009 aa20.09■□□□□ 0.81
DDR1-234ENST00000424544 HPS5Q9UPZ3 1129 aa20.09■□□□□ 0.81
DDR1-234ENST00000424544 DAGLAQ9Y4D2 1042 aa20.09■□□□□ 0.81
DDR1-234ENST00000424544 SRGAP3O43295 1099 aa20.08■□□□□ 0.81
DDR1-234ENST00000424544 ADORA1P30542 326 aa20.08■□□□□ 0.81
DDR1-234ENST00000424544 CCDC102BQ68D86 513 aa20.08■□□□□ 0.81
DDR1-234ENST00000424544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.08■□□□□ 0.81
DDR1-234ENST00000424544 HTTP42858 3142 aa20.08■□□□□ 0.8
DDR1-234ENST00000424544 OTOFQ9HC10 1997 aa20.08■□□□□ 0.8
DDR1-234ENST00000424544 DIXDC1Q155Q3 683 aa20.07■□□□□ 0.8
DDR1-234ENST00000424544 CDC42EP5Q6NZY7 148 aa20.07■□□□□ 0.8
DDR1-234ENST00000424544 FAM151AQ8WW52 585 aa20.07■□□□□ 0.8
DDR1-234ENST00000424544 RPAP1Q9BWH6 1393 aaPredicted RBP20.07■□□□□ 0.8
DDR1-234ENST00000424544 PDS5AQ29RF7 1337 aaKnown RBP20.06■□□□□ 0.8
DDR1-234ENST00000424544 SPDYE5A6NIY4 337 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms