RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 KIF23Q02241 960 aaPredicted RBP10.27□□□□□ -0.77
TRIM43CP-201ENST00000422468 DLGAP5Q15398 846 aa10.27□□□□□ -0.77
TRIM43CP-201ENST00000422468 PRAMEF18Q5VWM3 479 aa10.27□□□□□ -0.77
TRIM43CP-201ENST00000422468 ERICH6BQ5W0A0 696 aa10.27□□□□□ -0.77
TRIM43CP-201ENST00000422468 TDRD7Q8NHU6 1098 aaKnown RBP10.27□□□□□ -0.77
TRIM43CP-201ENST00000422468 FAM84BQ96KN1 310 aaPredicted RBP10.27□□□□□ -0.77
TRIM43CP-201ENST00000422468 MEIS3Q99687 375 aa10.27□□□□□ -0.77
TRIM43CP-201ENST00000422468 TSKSQ9UJT2 592 aa10.27□□□□□ -0.77
TRIM43CP-201ENST00000422468 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.77
TRIM43CP-201ENST00000422468 PCDHB13Q9Y5F0 798 aa10.27□□□□□ -0.77
TRIM43CP-201ENST00000422468 COL1A1P02452 1464 aaPredicted RBP10.27□□□□□ -0.77
TRIM43CP-201ENST00000422468 MYH13Q9UKX3 1938 aa10.27□□□□□ -0.77
TRIM43CP-201ENST00000422468 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
TRIM43CP-201ENST00000422468 NF2P35240 595 aa10.26□□□□□ -0.77
TRIM43CP-201ENST00000422468 GYG1P46976 350 aa10.26□□□□□ -0.77
TRIM43CP-201ENST00000422468 LRRC24Q50LG9 513 aa10.26□□□□□ -0.77
TRIM43CP-201ENST00000422468 METTL24Q5JXM2 366 aa10.26□□□□□ -0.77
TRIM43CP-201ENST00000422468 RASAL3Q86YV0 1011 aa10.26□□□□□ -0.77
TRIM43CP-201ENST00000422468 KLHDC4Q8TBB5 520 aa10.26□□□□□ -0.77
TRIM43CP-201ENST00000422468 SAGE1Q9NXZ1 904 aa10.26□□□□□ -0.77
TRIM43CP-201ENST00000422468 JAG2Q9Y219 1238 aa10.26□□□□□ -0.77
TRIM43CP-201ENST00000422468 F8W031 263 aaPredicted RBP10.25□□□□□ -0.77
TRIM43CP-201ENST00000422468 UBE2Q2LH0YL09 131 aa10.25□□□□□ -0.77
TRIM43CP-201ENST00000422468 PDE8BO95263 885 aa10.25□□□□□ -0.77
TRIM43CP-201ENST00000422468 TTLL12Q14166 644 aaPredicted RBP10.25□□□□□ -0.77
TRIM43CP-201ENST00000422468 CFAP100Q494V2 611 aa10.25□□□□□ -0.77
TRIM43CP-201ENST00000422468 MOB2Q70IA6 237 aa10.25□□□□□ -0.77
TRIM43CP-201ENST00000422468 VGLL2Q8N8G2 317 aa10.25□□□□□ -0.77
TRIM43CP-201ENST00000422468 API5Q9BZZ5 524 aaKnown RBP10.25□□□□□ -0.77
TRIM43CP-201ENST00000422468 DEFB129Q9H1M3 183 aa10.25□□□□□ -0.77
TRIM43CP-201ENST00000422468 MYO1BO43795 1136 aa10.24□□□□□ -0.77
TRIM43CP-201ENST00000422468 UBTFL1P0CB47 393 aaPredicted RBP10.24□□□□□ -0.77
TRIM43CP-201ENST00000422468 CAVIN4Q5BKX8 364 aa10.24□□□□□ -0.77
TRIM43CP-201ENST00000422468 MFSD14BQ5SR56 506 aa10.24□□□□□ -0.77
TRIM43CP-201ENST00000422468 C20orf194Q5TEA3 1177 aa10.24□□□□□ -0.77
TRIM43CP-201ENST00000422468 FBXO33Q7Z6M2 555 aa10.24□□□□□ -0.77
TRIM43CP-201ENST00000422468 VPS37DQ86XT2 251 aa10.24□□□□□ -0.77
TRIM43CP-201ENST00000422468 PRMT6Q96LA8 375 aaPredicted RBP10.24□□□□□ -0.77
TRIM43CP-201ENST00000422468 CSRNP1Q96S65 589 aa10.24□□□□□ -0.77
TRIM43CP-201ENST00000422468 RNF186Q9NXI6 227 aa10.24□□□□□ -0.77
TRIM43CP-201ENST00000422468 PCDHAC2Q9Y5I4 1007 aa10.24□□□□□ -0.77
TRIM43CP-201ENST00000422468 PPP2R3BQ9Y5P8 575 aa10.24□□□□□ -0.77
TRIM43CP-201ENST00000422468 EYA2O00167 538 aa10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 RBM5P52756 815 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 PUM3Q15397 648 aaKnown RBP10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 INTS3Q68E01 1043 aaKnown RBP10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 ARMC9Q7Z3E5 817 aa10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 TMEM57Q8N5G2 664 aa10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 CLUAP1Q96AJ1 413 aa10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 ABHD8Q96I13 439 aa10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 SERPINA10Q9UK55 444 aa10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 TTF2Q9UNY4 1162 aaKnown RBP10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 HDAC5Q9UQL6 1122 aa10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 KIF16BQ96L93 1317 aa10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 LAMB1P07942 1786 aa10.23□□□□□ -0.77
TRIM43CP-201ENST00000422468 CLRN2A0PK11 232 aa10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 FRAT2O75474 233 aaPredicted RBP10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 TRPA1O75762 1119 aa10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 IFIT1P09914 478 aaKnown RBP10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 FGFR2P21802 821 aa10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 PTPN12Q05209 780 aaKnown RBP10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 PDAP1Q13442 181 aaKnown RBP10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 PRKG1Q13976 671 aa10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 LDLRAD1Q5T700 205 aa10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 TBC1D22AQ8WUA7 517 aa10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 ARHGAP45Q92619 1136 aa10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 VEZTQ9HBM0 779 aa10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 IQSEC3Q9UPP2 1182 aaPredicted RBP10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 AOX1Q06278 1338 aa10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 SSC5DA1L4H1 1573 aa10.22□□□□□ -0.77
TRIM43CP-201ENST00000422468 CIAO1O76071 339 aa10.21□□□□□ -0.77
TRIM43CP-201ENST00000422468 BCAMP50895 628 aa10.21□□□□□ -0.77
TRIM43CP-201ENST00000422468 CHAF1AQ13111 956 aaPredicted RBP10.21□□□□□ -0.77
TRIM43CP-201ENST00000422468 SUPT20HL1Q3ZLR7 823 aa10.21□□□□□ -0.77
TRIM43CP-201ENST00000422468 ATF7IPQ6VMQ6 1270 aa10.21□□□□□ -0.77
TRIM43CP-201ENST00000422468 ATG9AQ7Z3C6 839 aa10.21□□□□□ -0.77
TRIM43CP-201ENST00000422468 DZIP1LQ8IYY4 767 aaKnown RBP10.21□□□□□ -0.77
TRIM43CP-201ENST00000422468 PANK1Q8TE04 598 aa10.21□□□□□ -0.77
TRIM43CP-201ENST00000422468 ANGEL1Q9UNK9 670 aaKnown RBP10.21□□□□□ -0.77
TRIM43CP-201ENST00000422468 UNCXA6NJT0 531 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 IPO8O15397 1037 aaKnown RBP10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 MAP3K13O43283 966 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 PPP1R12BO60237 982 aaPredicted RBP10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 SLC5A1P13866 664 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 CRKP46108 304 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 TM4SF4P48230 202 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 PSEN1P49768 467 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 HDLBPQ00341 1268 aaKnown RBP10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 TNFAIP1Q13829 316 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 RASA3Q14644 834 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 GRIK5Q16478 980 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 MAP3K11Q16584 847 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 NBPF12Q5TAG4 269 aaPredicted RBP10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 ZNF579Q8NAF0 562 aaKnown RBP10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 LPIN2Q92539 896 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 MCOLN1Q9GZU1 580 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 TDRD3Q9H7E2 651 aaKnown RBP10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 OTOFQ9HC10 1997 aa10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 ZNF70Q9UC06 446 aaPredicted RBP10.2□□□□□ -0.78
TRIM43CP-201ENST00000422468 PA2G4Q9UQ80 394 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms