RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 MECOMQ03112 1051 aa19.04■□□□□ 0.64
DDX55-203ENST00000421670 SPTY2D1Q68D10 685 aaPredicted RBP19.04■□□□□ 0.64
DDX55-203ENST00000421670 DZIP1Q86YF9 867 aaKnown RBP19.04■□□□□ 0.64
DDX55-203ENST00000421670 ZNF384Q8TF68 577 aa19.04■□□□□ 0.64
DDX55-203ENST00000421670 CDK5RAP2Q96SN8 1893 aa19.04■□□□□ 0.64
DDX55-203ENST00000421670 WDR90Q96KV7 1748 aa19.03■□□□□ 0.64
DDX55-203ENST00000421670 SHTN1A0MZ66 631 aa19.03■□□□□ 0.64
DDX55-203ENST00000421670 SCNN1DP51172 638 aa19.03■□□□□ 0.64
DDX55-203ENST00000421670 MAP3K12Q12852 859 aa19.03■□□□□ 0.64
DDX55-203ENST00000421670 DIXDC1Q155Q3 683 aa19.03■□□□□ 0.64
DDX55-203ENST00000421670 SLFNL1Q499Z3 407 aa19.03■□□□□ 0.64
DDX55-203ENST00000421670 AGBL3Q8NEM8 1001 aa19.03■□□□□ 0.64
DDX55-203ENST00000421670 SCN4AP35499 1836 aa19.03■□□□□ 0.64
DDX55-203ENST00000421670 MAGEB6Q8N7X4 407 aa19.02■□□□□ 0.64
DDX55-203ENST00000421670 NSUN4Q96CB9 384 aaKnown RBP19.02■□□□□ 0.64
DDX55-203ENST00000421670 SUGT1Q9Y2Z0 365 aa19.02■□□□□ 0.64
DDX55-203ENST00000421670 PDE6AP16499 860 aa19.02■□□□□ 0.63
DDX55-203ENST00000421670 RPS12P25398 132 aaKnown RBP19.02■□□□□ 0.63
DDX55-203ENST00000421670 SLC9C2Q5TAH2 1124 aa19.02■□□□□ 0.63
DDX55-203ENST00000421670 DPY19L2Q6NUT2 758 aa19.02■□□□□ 0.63
DDX55-203ENST00000421670 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.02■□□□□ 0.633e-11■□□□□ 10.1
DDX55-203ENST00000421670 GLTPD2A6NH11 291 aa19.01■□□□□ 0.63
DDX55-203ENST00000421670 USP17L8P0C7I0 530 aa19■□□□□ 0.63
DDX55-203ENST00000421670 ADD2P35612 726 aa19■□□□□ 0.63
DDX55-203ENST00000421670 NAA16Q6N069 864 aaPredicted RBP19■□□□□ 0.63
DDX55-203ENST00000421670 ADGRA1Q86SQ6 560 aa19■□□□□ 0.63
DDX55-203ENST00000421670 MICALL2Q8IY33 904 aa19■□□□□ 0.63
DDX55-203ENST00000421670 MAST3O60307 1309 aa19■□□□□ 0.63
DDX55-203ENST00000421670 ZNF532Q9HCE3 1301 aa19■□□□□ 0.63
DDX55-203ENST00000421670 RFX7Q2KHR2 1363 aa19■□□□□ 0.63
DDX55-203ENST00000421670 FOCADQ5VW36 1801 aa18.99■□□□□ 0.63
DDX55-203ENST00000421670 DPF2Q92785 391 aa18.99■□□□□ 0.63
DDX55-203ENST00000421670 PCDHAC2Q9Y5I4 1007 aa18.99■□□□□ 0.63
DDX55-203ENST00000421670 MROH7-TTC4A0A0A0MT08 1334 aa18.98■□□□□ 0.63
DDX55-203ENST00000421670 TCRBV5S4A2TA0A5A2 114 aa18.98■□□□□ 0.63
DDX55-203ENST00000421670 CYP7A1P22680 504 aa18.98■□□□□ 0.63
DDX55-203ENST00000421670 OGFOD1Q8N543 542 aa18.98■□□□□ 0.63
DDX55-203ENST00000421670 GPRC5DQ9NZD1 345 aa18.98■□□□□ 0.63
DDX55-203ENST00000421670 CNOT7Q9UIV1 285 aaKnown RBP18.98■□□□□ 0.63
DDX55-203ENST00000421670 HDAC9Q9UKV0 1011 aa18.98■□□□□ 0.63
DDX55-203ENST00000421670 RNF113AO15541 343 aaKnown RBP18.98■□□□□ 0.63
DDX55-203ENST00000421670 CRKP46108 304 aa18.98■□□□□ 0.63
DDX55-203ENST00000421670 ZSCAN25Q6NSZ9 544 aa18.98■□□□□ 0.63
DDX55-203ENST00000421670 TEKT1Q969V4 418 aa18.98■□□□□ 0.63
DDX55-203ENST00000421670 L3MBTL3Q96JM7 780 aaPredicted RBP18.98■□□□□ 0.63
DDX55-203ENST00000421670 DAGLAQ9Y4D2 1042 aa18.98■□□□□ 0.63
DDX55-203ENST00000421670 EGFRP00533 1210 aa18.97■□□□□ 0.63
DDX55-203ENST00000421670 EPS15P42566 896 aa18.97■□□□□ 0.63
DDX55-203ENST00000421670 RBM5P52756 815 aaKnown RBP eCLIP18.97■□□□□ 0.63
DDX55-203ENST00000421670 ZNF280AP59817 542 aaPredicted RBP18.97■□□□□ 0.63
DDX55-203ENST00000421670 GSTO1P78417 241 aa18.97■□□□□ 0.63
DDX55-203ENST00000421670 MIGA1Q8NAN2 632 aa18.97■□□□□ 0.63
DDX55-203ENST00000421670 FAM227BQ96M60 508 aa18.97■□□□□ 0.63
DDX55-203ENST00000421670 SERPINA10Q9UK55 444 aa18.97■□□□□ 0.63
DDX55-203ENST00000421670 GAKO14976 1311 aa18.96■□□□□ 0.63
DDX55-203ENST00000421670 A0A0D9SFI3 127 aa18.96■□□□□ 0.63
DDX55-203ENST00000421670 ZFYP08048 801 aaPredicted RBP18.96■□□□□ 0.63
DDX55-203ENST00000421670 LMOD1P29536 600 aaPredicted RBP18.96■□□□□ 0.63
DDX55-203ENST00000421670 NMIQ13287 307 aaPredicted RBP18.96■□□□□ 0.63
DDX55-203ENST00000421670 UBE3CQ15386 1083 aa18.96■□□□□ 0.63
DDX55-203ENST00000421670 LRRFIP1Q32MZ4 808 aaKnown RBP18.96■□□□□ 0.63
DDX55-203ENST00000421670 CFAP100Q494V2 611 aa18.96■□□□□ 0.63
DDX55-203ENST00000421670 ZNF526Q8TF50 670 aaPredicted RBP18.96■□□□□ 0.63
DDX55-203ENST00000421670 SEC62Q99442 399 aaKnown RBP18.96■□□□□ 0.63
DDX55-203ENST00000421670 MYOZ2Q9NPC6 264 aa18.96■□□□□ 0.63
DDX55-203ENST00000421670 DIAPH3Q9NSV4 1193 aa18.96■□□□□ 0.63
DDX55-203ENST00000421670 NAV1Q8NEY1 1877 aa18.95■□□□□ 0.62
DDX55-203ENST00000421670 HDLBPQ00341 1268 aaKnown RBP18.95■□□□□ 0.62
DDX55-203ENST00000421670 TBC1D10BQ4KMP7 808 aaPredicted RBP18.95■□□□□ 0.62
DDX55-203ENST00000421670 SAMD7Q7Z3H4 446 aa18.95■□□□□ 0.62
DDX55-203ENST00000421670 SLF2Q8IX21 1173 aa18.95■□□□□ 0.62
DDX55-203ENST00000421670 APPBP2Q92624 585 aa18.95■□□□□ 0.62
DDX55-203ENST00000421670 PUS7LQ9H0K6 701 aaKnown RBP18.95■□□□□ 0.62
DDX55-203ENST00000421670 BAZ2AQ9UIF9 1905 aaKnown RBP18.94■□□□□ 0.62
DDX55-203ENST00000421670 H7C1D1 291 aa18.94■□□□□ 0.62
DDX55-203ENST00000421670 IGSF3O75054 1194 aa18.94■□□□□ 0.62
DDX55-203ENST00000421670 CHMLP26374 656 aa18.94■□□□□ 0.62
DDX55-203ENST00000421670 BTDP43251 543 aa18.94■□□□□ 0.62
DDX55-203ENST00000421670 ZMYM1Q5SVZ6 1142 aa18.94■□□□□ 0.62
DDX55-203ENST00000421670 RBM26Q5T8P6 1007 aaKnown RBP18.94■□□□□ 0.62
DDX55-203ENST00000421670 HHIPL2Q6UWX4 724 aa18.94■□□□□ 0.62
DDX55-203ENST00000421670 CWC27Q6UX04 472 aaKnown RBP18.94■□□□□ 0.62
DDX55-203ENST00000421670 OSBP2Q969R2 916 aa18.94■□□□□ 0.62
DDX55-203ENST00000421670 ZDHHC15Q96MV8 337 aa18.94■□□□□ 0.62
DDX55-203ENST00000421670 AATFQ9NY61 560 aaKnown RBP eCLIP18.94■□□□□ 0.62
DDX55-203ENST00000421670 M0R2C6 588 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 CDC45O75419 566 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 LDHCP07864 332 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 DYNLL1P63167 89 aaKnown RBP18.93■□□□□ 0.62
DDX55-203ENST00000421670 TRPM4Q8TD43 1214 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 POLR2AP24928 1970 aaKnown RBP18.93■□□□□ 0.62
DDX55-203ENST00000421670 SPDYE2BA6NHP3 402 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 POTECB2RU33 542 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 HIP1O00291 1037 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 SPDYE6P0CI01 402 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 DLGAP5Q15398 846 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 KIF4BQ2VIQ3 1234 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 APOBEC3HQ6NTF7 200 aaKnown RBP18.93■□□□□ 0.62
DDX55-203ENST00000421670 FAM163AQ96GL9 167 aaPredicted RBP18.93■□□□□ 0.62
DDX55-203ENST00000421670 PRMT6Q96LA8 375 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms