RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 CAVIN4Q5BKX8 364 aa17.06■□□□□ 0.32
HLA-DPA1-242ENST00000419277 CHAMP1Q96JM3 812 aa17.06■□□□□ 0.32
HLA-DPA1-242ENST00000419277 KRT23Q9C075 422 aa17.06■□□□□ 0.32
HLA-DPA1-242ENST00000419277 RNF41Q9H4P4 317 aaPredicted RBP17.06■□□□□ 0.32
HLA-DPA1-242ENST00000419277 USP21Q9UK80 565 aa17.06■□□□□ 0.32
HLA-DPA1-242ENST00000419277 JAK2O60674 1132 aa17.05■□□□□ 0.32
HLA-DPA1-242ENST00000419277 ZPR1O75312 459 aa17.05■□□□□ 0.32
HLA-DPA1-242ENST00000419277 ADRA2BP18089 450 aa17.05■□□□□ 0.32
HLA-DPA1-242ENST00000419277 TTLL5Q6EMB2 1281 aa17.05■□□□□ 0.32
HLA-DPA1-242ENST00000419277 TTC6Q86TZ1 520 aa17.05■□□□□ 0.32
HLA-DPA1-242ENST00000419277 SGMS1Q86VZ5 419 aa17.05■□□□□ 0.32
HLA-DPA1-242ENST00000419277 ANKRD2Q9GZV1 360 aa17.05■□□□□ 0.32
HLA-DPA1-242ENST00000419277 NAPBQ9H115 298 aa17.05■□□□□ 0.32
HLA-DPA1-242ENST00000419277 SEC31BQ9NQW1 1179 aa17.05■□□□□ 0.32
HLA-DPA1-242ENST00000419277 CLCN1P35523 988 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 LIFRP42702 1097 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 FOXD4L6Q3SYB3 417 aaPredicted RBP17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 SLFNL1Q499Z3 407 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 FOXD4L3Q6VB84 417 aaPredicted RBP17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 BRAPQ7Z569 592 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 LEO1Q8WVC0 666 aaPredicted RBP17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 SETDB2Q96T68 719 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 WWC3Q9ULE0 1092 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 DENND2AQ9ULE3 1009 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 RTCBQ9Y3I0 505 aaKnown RBP17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 GOLGA8BA8MQT2 603 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 CPLX1O14810 134 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 CCDC192P0DO97 292 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 GTF2E1P29083 439 aaPredicted RBP17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 SART3Q15020 963 aaKnown RBP17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 TPTE2Q6XPS3 522 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 NLRP3Q96P20 1036 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 LRRC2Q9BYS8 371 aa17.04■□□□□ 0.32
HLA-DPA1-242ENST00000419277 CCDC88AQ3V6T2 1871 aa17.03■□□□□ 0.32
HLA-DPA1-242ENST00000419277 KLF18A0A0U1RQI7 1052 aa17.03■□□□□ 0.32
HLA-DPA1-242ENST00000419277 ESPNB1AK53 854 aa17.03■□□□□ 0.32
HLA-DPA1-242ENST00000419277 CTDNEP1O95476 244 aa17.03■□□□□ 0.32
HLA-DPA1-242ENST00000419277 APPP05067 770 aa17.03■□□□□ 0.32
HLA-DPA1-242ENST00000419277 FERMT3Q86UX7 667 aa17.03■□□□□ 0.32
HLA-DPA1-242ENST00000419277 TMTC2Q8N394 836 aa17.03■□□□□ 0.32
HLA-DPA1-242ENST00000419277 MAGEB6Q8N7X4 407 aa17.03■□□□□ 0.32
HLA-DPA1-242ENST00000419277 NUP62CLQ9H1M0 184 aa17.03■□□□□ 0.32
HLA-DPA1-242ENST00000419277 HAND2P61296 217 aa17.02■□□□□ 0.32
HLA-DPA1-242ENST00000419277 PPP2R5BQ15173 497 aa17.02■□□□□ 0.32
HLA-DPA1-242ENST00000419277 MAP3K11Q16584 847 aa17.02■□□□□ 0.32
HLA-DPA1-242ENST00000419277 ERFEQ4G0M1 354 aa17.02■□□□□ 0.32
HLA-DPA1-242ENST00000419277 GIMAP6Q6P9H5 292 aa17.02■□□□□ 0.32
HLA-DPA1-242ENST00000419277 CCNL1Q9UK58 526 aaPredicted RBP17.02■□□□□ 0.32
HLA-DPA1-242ENST00000419277 STK36Q9NRP7 1315 aa17.02■□□□□ 0.32
HLA-DPA1-242ENST00000419277 CACNA1SQ13698 1873 aa17.02■□□□□ 0.31
HLA-DPA1-242ENST00000419277 SH2B2O14492 632 aaPredicted RBP17.01■□□□□ 0.31
HLA-DPA1-242ENST00000419277 CTAGE5O15320 804 aa17.01■□□□□ 0.31
HLA-DPA1-242ENST00000419277 ONECUT3O60422 494 aaPredicted RBP17.01■□□□□ 0.31
HLA-DPA1-242ENST00000419277 MBD4O95243 580 aa17.01■□□□□ 0.31
HLA-DPA1-242ENST00000419277 ANTXR2P58335 489 aa17.01■□□□□ 0.31
HLA-DPA1-242ENST00000419277 RBM43Q6ZSC3 357 aaKnown RBP17.01■□□□□ 0.31
HLA-DPA1-242ENST00000419277 IFNL3Q8IZI9 196 aa17.01■□□□□ 0.31
HLA-DPA1-242ENST00000419277 HELBQ8NG08 1087 aaPredicted RBP17.01■□□□□ 0.31
HLA-DPA1-242ENST00000419277 STAG1Q8WVM7 1258 aa17.01■□□□□ 0.31
HLA-DPA1-242ENST00000419277 LRP2BPQ9P2M1 347 aa17.01■□□□□ 0.31
HLA-DPA1-242ENST00000419277 ZSCAN30Q86W11 494 aa17.01■□□□□ 0.31
HLA-DPA1-242ENST00000419277 RCOR1Q9UKL0 485 aa17.01■□□□□ 0.31
HLA-DPA1-242ENST00000419277 FAM177BA6PVY3 158 aa17■□□□□ 0.31
HLA-DPA1-242ENST00000419277 AKNAD1Q5T1N1 836 aa17■□□□□ 0.31
HLA-DPA1-242ENST00000419277 NBPF5PQ86XG9 351 aaPredicted RBP17■□□□□ 0.31
HLA-DPA1-242ENST00000419277 VPS37DQ86XT2 251 aa17■□□□□ 0.31
HLA-DPA1-242ENST00000419277 FBXO18Q8NFZ0 1043 aa17■□□□□ 0.31
HLA-DPA1-242ENST00000419277 DDX11Q96FC9 970 aa17■□□□□ 0.31
HLA-DPA1-242ENST00000419277 FUCA2Q9BTY2 467 aa17■□□□□ 0.31
HLA-DPA1-242ENST00000419277 ANAPC4Q9UJX5 808 aa17■□□□□ 0.31
HLA-DPA1-242ENST00000419277 LAMB1P07942 1786 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 GNPATO15228 680 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 METAP2P50579 478 aaKnown RBP eCLIP16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 CCT2P78371 535 aaKnown RBP16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 MFSD6Q6ZSS7 791 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 TBC1D10CQ8IV04 446 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 WASF1Q92558 559 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 C8orf76Q96K31 380 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 GJD4Q96KN9 370 aaPredicted RBP16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 NBPF3Q9H094 633 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 CCDC39Q9UFE4 941 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 NAP1L2Q9ULW6 460 aaPredicted RBP16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 MINPP1Q9UNW1 487 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 HPS5Q9UPZ3 1129 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 CCDC196A0A1B0GTZ2 297 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 YEATS4O95619 227 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 TDO2P48775 406 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 BCAMP50895 628 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 RPS8P62241 208 aaKnown RBP16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 TBC1D9BQ66K14 1250 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 APOA5Q6Q788 366 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 SYNE3Q6ZMZ3 975 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 KCNG4Q8TDN1 519 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 BCL2L12Q9HB09 334 aa16.99■□□□□ 0.31
HLA-DPA1-242ENST00000419277 UBR3Q6ZT12 1888 aa16.98■□□□□ 0.31
HLA-DPA1-242ENST00000419277 ERICH2A1L162 156 aa16.98■□□□□ 0.31
HLA-DPA1-242ENST00000419277 GSG1L2A8MUP6 293 aa16.98■□□□□ 0.31
HLA-DPA1-242ENST00000419277 BICD2Q8TD16 824 aa16.98■□□□□ 0.31
HLA-DPA1-242ENST00000419277 BRIP1Q9BX63 1249 aa16.98■□□□□ 0.31
HLA-DPA1-242ENST00000419277 TNMDQ9H2S6 317 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms