RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 MB21D2Q8IYB1 491 aaPredicted RBP13.82□□□□□ -0.2
LIMK1-202ENST00000418310 WWC3Q9ULE0 1092 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 SPATA31A3Q5VYP0 1347 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 WDHD1O75717 1129 aaPredicted RBP13.82□□□□□ -0.2
LIMK1-202ENST00000418310 PFKFB1P16118 471 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 FAM177A1Q8N128 213 aaPredicted RBP13.82□□□□□ -0.2
LIMK1-202ENST00000418310 AGXT2Q9BYV1 514 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 PIH1D3Q9NQM4 214 aaKnown RBP13.82□□□□□ -0.2
LIMK1-202ENST00000418310 TRMT112Q9UI30 125 aaKnown RBP13.82□□□□□ -0.2
LIMK1-202ENST00000418310 AKAP2Q9Y2D5 859 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 MST1RQ04912 1400 aa13.81□□□□□ -0.2
LIMK1-202ENST00000418310 MROH7-TTC4A0A0A0MT08 1334 aa13.81□□□□□ -0.2
LIMK1-202ENST00000418310 ADALQ6DHV7 355 aa13.81□□□□□ -0.2
LIMK1-202ENST00000418310 KIAA1468Q9P260 1216 aa13.81□□□□□ -0.2
LIMK1-202ENST00000418310 ARFGEF2Q9Y6D5 1785 aa13.81□□□□□ -0.2
LIMK1-202ENST00000418310 CDC27P30260 824 aa13.81□□□□□ -0.2
LIMK1-202ENST00000418310 CHMP4CQ96CF2 233 aa13.81□□□□□ -0.2
LIMK1-202ENST00000418310 GPR108Q9NPR9 543 aa13.81□□□□□ -0.2
LIMK1-202ENST00000418310 ZNF215Q9UL58 517 aaPredicted RBP13.81□□□□□ -0.2
LIMK1-202ENST00000418310 ZNF532Q9HCE3 1301 aa13.81□□□□□ -0.2
LIMK1-202ENST00000418310 SMTNL1A8MU46 457 aa13.8□□□□□ -0.2
LIMK1-202ENST00000418310 PNOCQ13519 176 aa13.8□□□□□ -0.2
LIMK1-202ENST00000418310 ANO1Q5XXA6 986 aa13.8□□□□□ -0.2
LIMK1-202ENST00000418310 NAT10Q9H0A0 1025 aaKnown RBP13.8□□□□□ -0.2
LIMK1-202ENST00000418310 RTEL1Q9NZ71 1219 aa13.8□□□□□ -0.2
LIMK1-202ENST00000418310 RFX7Q2KHR2 1363 aa13.8□□□□□ -0.2
LIMK1-202ENST00000418310 DHX16O60231 1041 aaKnown RBP13.8□□□□□ -0.2
LIMK1-202ENST00000418310 KIF23Q02241 960 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-202ENST00000418310 VPS37DQ86XT2 251 aa13.8□□□□□ -0.2
LIMK1-202ENST00000418310 WDR17Q8IZU2 1322 aa13.8□□□□□ -0.2
LIMK1-202ENST00000418310 CCZ1BP86790 482 aa13.8□□□□□ -0.2
LIMK1-202ENST00000418310 CCZ1P86791 482 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-202ENST00000418310 SLC26A6Q9BXS9 759 aa13.8□□□□□ -0.2
LIMK1-202ENST00000418310 PHRF1Q9P1Y6 1649 aaKnown RBP13.79□□□□□ -0.2
LIMK1-202ENST00000418310 TNS3Q68CZ2 1445 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 TRPM3Q9HCF6 1732 aaPredicted RBP13.79□□□□□ -0.2
LIMK1-202ENST00000418310 PIGBQ92521 554 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 AIDAQ96BJ3 306 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 MRFAP1L1Q96HT8 127 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 ISCA1Q9BUE6 129 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 NBPF3Q9H094 633 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 IRS4O14654 1257 aaPredicted RBP13.79□□□□□ -0.2
LIMK1-202ENST00000418310 CIAO1O76071 339 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 LRRFIP1Q32MZ4 808 aaKnown RBP13.79□□□□□ -0.2
LIMK1-202ENST00000418310 KRT40Q6A162 431 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 BRINP3Q76B58 766 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 PDILTQ8N807 584 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 KCNG4Q8TDN1 519 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 SYKP43405 635 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 NBPF11Q86T75 865 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 MIGA1Q8NAN2 632 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 ZBTB9Q96C00 473 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.79□□□□□ -0.2
LIMK1-202ENST00000418310 KCNJ14Q9UNX9 436 aa13.79□□□□□ -0.2
LIMK1-202ENST00000418310 NEDD4P46934 1319 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 GOLGA8AA7E2F4 631 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 FOXN1O15353 648 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 PRKAB2O43741 272 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 HOMER1Q86YM7 354 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 ARMT1Q9H993 441 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 ZBTB1Q9Y2K1 713 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 LAMA4Q16363 1823 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 hCG_1642624A0A1W2PR95 340 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 ANKRD18BA2A2Z9 1011 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 ERVV-2B6SEH9 535 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 SERPINC1P01008 464 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 ELF2Q15723 593 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 TMEM67Q5HYA8 995 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 NUP133Q8WUM0 1156 aa13.78□□□□□ -0.2
LIMK1-202ENST00000418310 ANGEL1Q9UNK9 670 aaKnown RBP13.78□□□□□ -0.2
LIMK1-202ENST00000418310 ZFYP08048 801 aaPredicted RBP13.77□□□□□ -0.2
LIMK1-202ENST00000418310 ZNF827Q17R98 1081 aa13.77□□□□□ -0.2
LIMK1-202ENST00000418310 SARM1Q6SZW1 724 aa13.77□□□□□ -0.2
LIMK1-202ENST00000418310 SYT10Q6XYQ8 523 aa13.77□□□□□ -0.2
LIMK1-202ENST00000418310 MAGEB6Q8N7X4 407 aa13.77□□□□□ -0.2
LIMK1-202ENST00000418310 TTLL11Q8NHH1 800 aa13.77□□□□□ -0.2
LIMK1-202ENST00000418310 DPF2Q92785 391 aa13.77□□□□□ -0.2
LIMK1-202ENST00000418310 SFPQP23246 707 aaKnown RBP eCLIP13.77□□□□□ -0.21
LIMK1-202ENST00000418310 CFAP100Q494V2 611 aa13.77□□□□□ -0.21
LIMK1-202ENST00000418310 CCDC102BQ68D86 513 aa13.77□□□□□ -0.21
LIMK1-202ENST00000418310 ZBTB38Q8NAP3 1195 aaPredicted RBP13.77□□□□□ -0.21
LIMK1-202ENST00000418310 IFIT3O14879 490 aaKnown RBP13.77□□□□□ -0.21
LIMK1-202ENST00000418310 MBD4O95243 580 aa13.77□□□□□ -0.21
LIMK1-202ENST00000418310 CAVIN2O95810 425 aa13.77□□□□□ -0.21
LIMK1-202ENST00000418310 APOA5Q6Q788 366 aa13.77□□□□□ -0.21
LIMK1-202ENST00000418310 SMIM22K7EJ46 135 aa13.76□□□□□ -0.21
LIMK1-202ENST00000418310 ZBTB43O43298 467 aa13.76□□□□□ -0.21
LIMK1-202ENST00000418310 CTIFO43310 598 aaKnown RBP13.76□□□□□ -0.21
LIMK1-202ENST00000418310 PCCAP05165 728 aaPredicted RBP13.76□□□□□ -0.21
LIMK1-202ENST00000418310 PDE6AP16499 860 aa13.76□□□□□ -0.21
LIMK1-202ENST00000418310 GUCY1A2P33402 732 aa13.76□□□□□ -0.21
LIMK1-202ENST00000418310 ADD2P35612 726 aa13.76□□□□□ -0.21
LIMK1-202ENST00000418310 TRIM29Q14134 588 aa13.76□□□□□ -0.21
LIMK1-202ENST00000418310 ARMCX5Q6P1M9 558 aa13.76□□□□□ -0.21
LIMK1-202ENST00000418310 CCAR2Q8N163 923 aaKnown RBP13.76□□□□□ -0.21
LIMK1-202ENST00000418310 LRRN4CLQ8ND94 238 aa13.76□□□□□ -0.21
LIMK1-202ENST00000418310 ANKRD7Q92527 254 aa13.76□□□□□ -0.21
LIMK1-202ENST00000418310 IARSP41252 1262 aaKnown RBP13.76□□□□□ -0.21
LIMK1-202ENST00000418310 AXDND1Q5T1B0 1012 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms