RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 SLC4A8Q2Y0W8 1093 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 CCDC184Q52MB2 194 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 C20orf194Q5TEA3 1177 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 CCDC26Q8TAB7 109 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 TSGA10Q9BZW7 698 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 SIL1Q9H173 461 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 MAGI3Q5TCQ9 1506 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 F13A1P00488 732 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 CCT4P50991 539 aaKnown RBP11.56□□□□□ -0.56
SATB1-204ENST00000417717 ESRRGP62508 458 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.56□□□□□ -0.56
SATB1-204ENST00000417717 TCP11Q8WWU5 503 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 NEK1Q96PY6 1258 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 MPHOSPH6Q99547 160 aaKnown RBP11.56□□□□□ -0.56
SATB1-204ENST00000417717 MIS12Q9H081 205 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 CTTNBP2NLQ9P2B4 639 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 CCDC151A5D8V7 595 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 RASSF10A6NK89 507 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 ARHGEF5Q12774 1597 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 GAS2L2Q8NHY3 880 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 PLCB1Q9NQ66 1216 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 MIS18AQ9NYP9 233 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 AKAP2Q9Y2D5 859 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 NUB1Q9Y5A7 615 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 GCFC2P16383 781 aaKnown RBP11.56□□□□□ -0.56
SATB1-204ENST00000417717 FAM69CQ0P6D2 419 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 SRLQ86TD4 932 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 KCNG4Q8TDN1 519 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 DDX21Q9NR30 783 aaKnown RBP eCLIP11.56□□□□□ -0.56
SATB1-204ENST00000417717 FANCAO15360 1455 aa11.56□□□□□ -0.56
SATB1-204ENST00000417717 ST13P4Q8IZP2 240 aaPredicted RBP11.55□□□□□ -0.56
SATB1-204ENST00000417717 CCDC42Q96M95 316 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.55□□□□□ -0.56
SATB1-204ENST00000417717 ZNF330Q9Y3S2 320 aaPredicted RBP11.55□□□□□ -0.56
SATB1-204ENST00000417717 SLFNL1Q499Z3 407 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 NME8Q8N427 588 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 TSNARE1Q96NA8 513 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 ITGB1BP2Q9UKP3 347 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 MAN1A2O60476 641 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 SLC20A2Q08357 652 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 ANKRD20A3Q5VUR7 823 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 CWC27Q6UX04 472 aaKnown RBP11.55□□□□□ -0.56
SATB1-204ENST00000417717 TMEM51Q9NW97 253 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 ABCC10Q5T3U5 1492 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 PPP2R1AP30153 589 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 CA8P35219 290 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 BLVRAP53004 296 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 SKOR1P84550 965 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 ATP2B3Q16720 1220 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 ZSCAN25Q6NSZ9 544 aa11.55□□□□□ -0.56
SATB1-204ENST00000417717 GCC2Q8IWJ2 1684 aa11.54□□□□□ -0.56
SATB1-204ENST00000417717 DYTNA2CJ06 578 aa11.54□□□□□ -0.56
SATB1-204ENST00000417717 SYKP43405 635 aa11.54□□□□□ -0.56
SATB1-204ENST00000417717 CALCOCO2Q13137 446 aa11.54□□□□□ -0.56
SATB1-204ENST00000417717 RRP36Q96EU6 259 aaKnown RBP11.54□□□□□ -0.56
SATB1-204ENST00000417717 MORC2Q9Y6X9 1032 aaPredicted RBP11.54□□□□□ -0.56
SATB1-204ENST00000417717 AKR1B15C9JRZ8 316 aaPredicted RBP11.54□□□□□ -0.56
SATB1-204ENST00000417717 CCDC122Q5T0U0 273 aa11.54□□□□□ -0.56
SATB1-204ENST00000417717 NEUROD6Q96NK8 337 aa11.54□□□□□ -0.56
SATB1-204ENST00000417717 ACTN4O43707 911 aaKnown RBP11.54□□□□□ -0.56
SATB1-204ENST00000417717 HIBCHQ6NVY1 386 aaPredicted RBP11.54□□□□□ -0.56
SATB1-204ENST00000417717 CCDC197Q8NCU1 140 aa11.54□□□□□ -0.56
SATB1-204ENST00000417717 ZHX3Q9H4I2 956 aa11.54□□□□□ -0.56
SATB1-204ENST00000417717 HOMER3Q9NSC5 361 aa11.54□□□□□ -0.56
SATB1-204ENST00000417717 ZNF711Q9Y462 761 aa11.54□□□□□ -0.56
SATB1-204ENST00000417717 PNMA6AP0CW24 399 aaPredicted RBP11.53□□□□□ -0.56
SATB1-204ENST00000417717 PHBP35232 272 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 CRYMQ14894 314 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 LONRF2Q1L5Z9 754 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 MFSD4BQ5TF39 518 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 SYTL4Q96C24 671 aaPredicted RBP11.53□□□□□ -0.56
SATB1-204ENST00000417717 MKL2Q9ULH7 1088 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 IBTKQ9P2D0 1353 aaPredicted RBP11.53□□□□□ -0.56
SATB1-204ENST00000417717 IDEP14735 1019 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 CTNNA2P26232 953 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 TMED10P49755 219 aaKnown RBP11.53□□□□□ -0.56
SATB1-204ENST00000417717 ADAM21Q9UKJ8 722 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 TSC22D4Q9Y3Q8 395 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 TEFQ10587 303 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 SLC44A4Q53GD3 710 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 AEBP2Q6ZN18 517 aaPredicted RBP11.53□□□□□ -0.56
SATB1-204ENST00000417717 CCDC80Q76M96 950 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 TBC1D2BQ9UPU7 963 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 TWISTNBQ3B726 338 aaPredicted RBP11.53□□□□□ -0.56
SATB1-204ENST00000417717 LCA5Q86VQ0 697 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 IWS1Q96ST2 819 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 ASXL2Q76L83 1435 aa11.53□□□□□ -0.56
SATB1-204ENST00000417717 ATP2B2Q01814 1243 aa11.52□□□□□ -0.56
SATB1-204ENST00000417717 KRT71Q3SY84 523 aa11.52□□□□□ -0.56
SATB1-204ENST00000417717 SH2D4AQ9H788 454 aa11.52□□□□□ -0.56
SATB1-204ENST00000417717 SYNCQ9H7C4 482 aa11.52□□□□□ -0.56
SATB1-204ENST00000417717 SLC52A1Q9NWF4 448 aa11.52□□□□□ -0.56
SATB1-204ENST00000417717 RMND1Q9NWS8 449 aa11.52□□□□□ -0.56
SATB1-204ENST00000417717 FAM169AQ9Y6X4 670 aa11.52□□□□□ -0.56
SATB1-204ENST00000417717 TPD52L2O43399 206 aaKnown RBP11.52□□□□□ -0.57
SATB1-204ENST00000417717 MYL5Q02045 173 aa11.52□□□□□ -0.57
SATB1-204ENST00000417717 MAP7D3Q8IWC1 876 aa11.52□□□□□ -0.57
SATB1-204ENST00000417717 ZNF280CQ8ND82 737 aa11.52□□□□□ -0.57
SATB1-204ENST00000417717 PRPF31Q8WWY3 499 aaKnown RBP11.52□□□□□ -0.57
SATB1-204ENST00000417717 KLHL29Q96CT2 875 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms