RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 DZIP1Q86YF9 867 aaKnown RBP13.58□□□□□ -0.24
TM9SF4-203ENST00000417389 ZGPATQ8N5A5 531 aaKnown RBP13.58□□□□□ -0.24
TM9SF4-203ENST00000417389 CCDC8Q9H0W5 538 aaPredicted RBP13.58□□□□□ -0.24
TM9SF4-203ENST00000417389 GBA2Q9HCG7 927 aaPredicted RBP13.58□□□□□ -0.24
TM9SF4-203ENST00000417389 TMOD2Q9NZR1 351 aa13.58□□□□□ -0.24
TM9SF4-203ENST00000417389 NOP58Q9Y2X3 529 aaKnown RBP13.58□□□□□ -0.24
TM9SF4-203ENST00000417389 HUNKP57058 714 aa13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 PRKG1Q13976 671 aa13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 SPTY2D1Q68D10 685 aaPredicted RBP13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 AACSQ86V21 672 aa13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 MTMR14Q8NCE2 650 aa13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 DBNDD2Q9BQY9 259 aa13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 TDRD3Q9H7E2 651 aaKnown RBP13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 IL1RAPL2Q9NP60 686 aa13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 GPR108Q9NPR9 543 aa13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 SUGT1Q9Y2Z0 365 aa13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 TLL2Q9Y6L7 1015 aa13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 CNTNAP1P78357 1384 aa13.57□□□□□ -0.24
TM9SF4-203ENST00000417389 ZNF646O15015 1829 aaPredicted RBP13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 TCP10L2B9ZVM9 353 aa13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 PRDX5P30044 214 aa13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 ECE1P42892 770 aa13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 VEGFBP49765 207 aa13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 TNFAIP1Q13829 316 aa13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 CYP4F22Q6NT55 531 aa13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 SPATA5Q8NB90 893 aa13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 RHPN1Q8TCX5 695 aa13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 CRBNQ96SW2 442 aa13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 DEFB129Q9H1M3 183 aa13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 SNRKQ9NRH2 765 aa13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 ZNF70Q9UC06 446 aaPredicted RBP13.56□□□□□ -0.24
TM9SF4-203ENST00000417389 COL1A1P02452 1464 aaPredicted RBP13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 MYH13Q9UKX3 1938 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 RASSF10A6NK89 507 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 IFIT2P09913 472 aaKnown RBP13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 TNNI2P48788 182 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 HDLBPQ00341 1268 aaKnown RBP13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 DIXDC1Q155Q3 683 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 PI16Q6UXB8 463 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 ERICH6Q7L0X2 663 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 SAPCD2Q86UD0 394 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 SIRT2Q8IXJ6 389 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 CLASRPQ8N2M8 674 aaKnown RBP13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 KIF1BPQ96EK5 621 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 ZBED3Q96IU2 234 aaPredicted RBP13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 CAPNS2Q96L46 248 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 RAI14Q9P0K7 980 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 HMG20BQ9P0W2 317 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 LRP2BPQ9P2M1 347 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 TRPM7Q96QT4 1865 aa13.55□□□□□ -0.24
TM9SF4-203ENST00000417389 POLR2AP24928 1970 aaKnown RBP13.54□□□□□ -0.24
TM9SF4-203ENST00000417389 RAB11FIP3O75154 756 aa13.54□□□□□ -0.24
TM9SF4-203ENST00000417389 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
TM9SF4-203ENST00000417389 SLF2Q8IX21 1173 aa13.54□□□□□ -0.24
TM9SF4-203ENST00000417389 EAF2Q96CJ1 260 aaPredicted RBP13.54□□□□□ -0.24
TM9SF4-203ENST00000417389 TLR7Q9NYK1 1049 aaKnown RBP13.54□□□□□ -0.24
TM9SF4-203ENST00000417389 DBNLQ9UJU6 430 aaKnown RBP13.54□□□□□ -0.24
TM9SF4-203ENST00000417389 WDR33Q9C0J8 1336 aaKnown RBP13.54□□□□□ -0.24
TM9SF4-203ENST00000417389 ARAP2Q8WZ64 1704 aa13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 ARID4AP29374 1257 aaPredicted RBP13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 MCAMP43121 646 aa13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 ZNF157P51786 506 aaPredicted RBP13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 CACNB3P54284 484 aa13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 RASA3Q14644 834 aa13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 SUPT20HL1Q3ZLR7 823 aa13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 HHIPL2Q6UWX4 724 aa13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 TBC1D9Q6ZT07 1266 aa13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 ARMC9Q7Z3E5 817 aa13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 ZDHHC15Q96MV8 337 aa13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 PPP2R3BQ9Y5P8 575 aa13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 AOX1Q06278 1338 aa13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 SALL1Q9NSC2 1324 aa13.53□□□□□ -0.24
TM9SF4-203ENST00000417389 UBE2Q2LH0YL09 131 aa13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 GSTO1P78417 241 aa13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 MOB2Q70IA6 237 aa13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 AIDAQ96BJ3 306 aa13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 NOL10Q9BSC4 688 aaKnown RBP13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 MRIQ9BWK5 157 aa13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 LRRCC1Q9C099 1032 aa13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 USP40Q9NVE5 1235 aa13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 ANGEL1Q9UNK9 670 aaKnown RBP13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 DAGLAQ9Y4D2 1042 aa13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 SUPT16HQ9Y5B9 1047 aaKnown RBP13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 PDS5AQ29RF7 1337 aaKnown RBP13.52□□□□□ -0.25
TM9SF4-203ENST00000417389 PPP1R12BO60237 982 aaPredicted RBP13.51□□□□□ -0.25
TM9SF4-203ENST00000417389 FKBP1BP68106 108 aa13.51□□□□□ -0.25
TM9SF4-203ENST00000417389 MECOMQ03112 1051 aa13.51□□□□□ -0.25
TM9SF4-203ENST00000417389 APOBEC3HQ6NTF7 200 aaKnown RBP13.51□□□□□ -0.25
TM9SF4-203ENST00000417389 RGMBQ6NW40 437 aa13.51□□□□□ -0.25
TM9SF4-203ENST00000417389 JMYQ8N9B5 988 aa13.51□□□□□ -0.25
TM9SF4-203ENST00000417389 BEGAINQ9BUH8 593 aa13.51□□□□□ -0.25
TM9SF4-203ENST00000417389 SMARCA5O60264 1052 aaPredicted RBP13.5□□□□□ -0.25
TM9SF4-203ENST00000417389 AOC2O75106 756 aa13.5□□□□□ -0.25
TM9SF4-203ENST00000417389 LDHCP07864 332 aa13.5□□□□□ -0.25
TM9SF4-203ENST00000417389 ZAP70P43403 619 aa13.5□□□□□ -0.25
TM9SF4-203ENST00000417389 TCP10Q12799 353 aa13.5□□□□□ -0.25
TM9SF4-203ENST00000417389 NBPF12Q5TAG4 269 aaPredicted RBP13.5□□□□□ -0.25
TM9SF4-203ENST00000417389 TMEM39BQ9GZU3 492 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms