RNA–Protein interactions for RNA: ENST00000411341.1

RN7SKP172-201, Transcript of RNA, 7SK small nuclear pseudogene 172, humanhuman

BASIC

Gene RN7SKP172, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP172-201ENST00000411341 MLLT1Q03111 559 aaPredicted RBP12.61□□□□□ -0.39
RN7SKP172-201ENST00000411341 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
RN7SKP172-201ENST00000411341 LDLRAD1Q5T700 205 aa12.61□□□□□ -0.39
RN7SKP172-201ENST00000411341 CTU1Q7Z7A3 348 aaKnown RBP12.61□□□□□ -0.39
RN7SKP172-201ENST00000411341 WDR66Q8TBY9 1149 aa12.61□□□□□ -0.39
RN7SKP172-201ENST00000411341 SIL1Q9H173 461 aa12.61□□□□□ -0.39
RN7SKP172-201ENST00000411341 SUGT1Q9Y2Z0 365 aa12.61□□□□□ -0.39
RN7SKP172-201ENST00000411341 IL15P40933 162 aaPredicted RBP12.6□□□□□ -0.39
RN7SKP172-201ENST00000411341 PKN2Q16513 984 aaKnown RBP12.6□□□□□ -0.39
RN7SKP172-201ENST00000411341 MAP3K11Q16584 847 aa12.6□□□□□ -0.39
RN7SKP172-201ENST00000411341 NBPF12Q5TAG4 269 aaPredicted RBP12.6□□□□□ -0.39
RN7SKP172-201ENST00000411341 SPRYD7Q5W111 196 aa12.6□□□□□ -0.39
RN7SKP172-201ENST00000411341 TRMT2AQ8IZ69 625 aaKnown RBP12.6□□□□□ -0.39
RN7SKP172-201ENST00000411341 ARHGAP45Q92619 1136 aa12.6□□□□□ -0.39
RN7SKP172-201ENST00000411341 FRAT1Q92837 279 aaPredicted RBP12.6□□□□□ -0.39
RN7SKP172-201ENST00000411341 PCDHAC2Q9Y5I4 1007 aa12.6□□□□□ -0.39
RN7SKP172-201ENST00000411341 CSADQ9Y600 493 aa12.6□□□□□ -0.39
RN7SKP172-201ENST00000411341 ATP2B3Q16720 1220 aa12.59□□□□□ -0.39
RN7SKP172-201ENST00000411341 LRRFIP2Q9Y608 721 aaKnown RBP12.59□□□□□ -0.39
RN7SKP172-201ENST00000411341 PSME4Q14997 1843 aa12.59□□□□□ -0.39
RN7SKP172-201ENST00000411341 GPR25O00155 361 aa12.58□□□□□ -0.4
RN7SKP172-201ENST00000411341 FKTNO75072 461 aa12.58□□□□□ -0.4
RN7SKP172-201ENST00000411341 CIAO1O76071 339 aa12.58□□□□□ -0.4
RN7SKP172-201ENST00000411341 RARSP54136 660 aaKnown RBP12.58□□□□□ -0.4
RN7SKP172-201ENST00000411341 WNK4Q96J92 1243 aa12.58□□□□□ -0.4
RN7SKP172-201ENST00000411341 MRIQ9BWK5 157 aa12.58□□□□□ -0.4
RN7SKP172-201ENST00000411341 FZD1Q9UP38 647 aa12.58□□□□□ -0.4
RN7SKP172-201ENST00000411341 AKAP2Q9Y2D5 859 aa12.58□□□□□ -0.4
RN7SKP172-201ENST00000411341 USP2O75604 605 aaPredicted RBP12.57□□□□□ -0.4
RN7SKP172-201ENST00000411341 MAP3K9P80192 1104 aa12.57□□□□□ -0.4
RN7SKP172-201ENST00000411341 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
RN7SKP172-201ENST00000411341 DCAF15Q66K64 600 aa12.57□□□□□ -0.4
RN7SKP172-201ENST00000411341 HHIPL2Q6UWX4 724 aa12.57□□□□□ -0.4
RN7SKP172-201ENST00000411341 ZGPATQ8N5A5 531 aaKnown RBP12.57□□□□□ -0.4
RN7SKP172-201ENST00000411341 VGLL2Q8N8G2 317 aa12.57□□□□□ -0.4
RN7SKP172-201ENST00000411341 ZNF296Q8WUU4 475 aaPredicted RBP12.57□□□□□ -0.4
RN7SKP172-201ENST00000411341 ELP3Q9H9T3 547 aa12.57□□□□□ -0.4
RN7SKP172-201ENST00000411341 DENND2AQ9ULE3 1009 aa12.57□□□□□ -0.4
RN7SKP172-201ENST00000411341 SEMA3EO15041 775 aa12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 SRGAP3O43295 1099 aa12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 LDHBP07195 334 aaKnown RBP12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 FGFR2P21802 821 aa12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 RFX5P48382 616 aaPredicted RBP12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 ARHGEF6Q15052 776 aa12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 NOM1Q5C9Z4 860 aaKnown RBP12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 IFNL1Q8IU54 200 aa12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 SLF2Q8IX21 1173 aa12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 CLMNQ96JQ2 1002 aa12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 ZDHHC15Q96MV8 337 aa12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 TMEM39BQ9GZU3 492 aa12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 POLR2AP24928 1970 aaKnown RBP12.56□□□□□ -0.4
RN7SKP172-201ENST00000411341 GTF2A2P52657 109 aa12.55□□□□□ -0.4
RN7SKP172-201ENST00000411341 SPTY2D1Q68D10 685 aaPredicted RBP12.55□□□□□ -0.4
RN7SKP172-201ENST00000411341 INTS3Q68E01 1043 aaKnown RBP12.55□□□□□ -0.4
RN7SKP172-201ENST00000411341 FAM83AQ86UY5 434 aa12.55□□□□□ -0.4
RN7SKP172-201ENST00000411341 OPTNQ96CV9 577 aa12.55□□□□□ -0.4
RN7SKP172-201ENST00000411341 NEUROD6Q96NK8 337 aa12.55□□□□□ -0.4
RN7SKP172-201ENST00000411341 GNAI2P04899 355 aa12.54□□□□□ -0.4
RN7SKP172-201ENST00000411341 CACNB3P54284 484 aa12.54□□□□□ -0.4
RN7SKP172-201ENST00000411341 HNRNPUQ00839 825 aaKnown RBP eCLIP12.54□□□□□ -0.4
RN7SKP172-201ENST00000411341 G3BP1Q13283 466 aaKnown RBP eCLIP12.54□□□□□ -0.4
RN7SKP172-201ENST00000411341 MVPQ14764 893 aaKnown RBP12.54□□□□□ -0.4
RN7SKP172-201ENST00000411341 FKBP1CQ5VVH2 108 aa12.54□□□□□ -0.4
RN7SKP172-201ENST00000411341 ATF7IPQ6VMQ6 1270 aa12.54□□□□□ -0.4
RN7SKP172-201ENST00000411341 ATG9AQ7Z3C6 839 aa12.54□□□□□ -0.4
RN7SKP172-201ENST00000411341 ERO1AQ96HE7 468 aa12.54□□□□□ -0.4
RN7SKP172-201ENST00000411341 MEIS3Q99687 375 aa12.54□□□□□ -0.4
RN7SKP172-201ENST00000411341 CFHR5Q9BXR6 569 aa12.54□□□□□ -0.4
RN7SKP172-201ENST00000411341 COPRSQ9NQ92 184 aa12.54□□□□□ -0.4
RN7SKP172-201ENST00000411341 OS9Q13438 667 aaPredicted RBP12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 ZKSCAN2Q63HK3 967 aa12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 DIEXFQ68CQ4 756 aaKnown RBP12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 DZIP1Q86YF9 867 aaKnown RBP12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 FTSJ3Q8IY81 847 aaKnown RBP12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 CLUAP1Q96AJ1 413 aa12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 WRNIP1Q96S55 665 aa12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 ZNF341Q9BYN7 854 aa12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 ZFYVE28Q9HCC9 887 aa12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 USP40Q9NVE5 1235 aa12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 PA2G4Q9UQ80 394 aaKnown RBP12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 PCNTO95613 3336 aa12.53□□□□□ -0.4
RN7SKP172-201ENST00000411341 CCL15-CCL14A0A0B4J2E2 113 aa12.52□□□□□ -0.41
RN7SKP172-201ENST00000411341 RGS19P49795 217 aa12.52□□□□□ -0.41
RN7SKP172-201ENST00000411341 GRIK5Q16478 980 aa12.52□□□□□ -0.41
RN7SKP172-201ENST00000411341 CCL15Q16663 113 aa12.52□□□□□ -0.41
RN7SKP172-201ENST00000411341 APOBEC3HQ6NTF7 200 aaKnown RBP12.52□□□□□ -0.41
RN7SKP172-201ENST00000411341 FBXO46Q6PJ61 603 aaPredicted RBP12.52□□□□□ -0.41
RN7SKP172-201ENST00000411341 ZSCAN29Q8IWY8 852 aaPredicted RBP12.52□□□□□ -0.41
RN7SKP172-201ENST00000411341 OTUD5Q96G74 571 aa12.52□□□□□ -0.41
RN7SKP172-201ENST00000411341 TEPSINQ96N21 525 aa12.52□□□□□ -0.41
RN7SKP172-201ENST00000411341 HPS5Q9UPZ3 1129 aa12.52□□□□□ -0.41
RN7SKP172-201ENST00000411341 TRIM17Q9Y577 477 aa12.52□□□□□ -0.41
RN7SKP172-201ENST00000411341 AOX1Q06278 1338 aa12.52□□□□□ -0.41
RN7SKP172-201ENST00000411341 CETPP11597 493 aa12.51□□□□□ -0.41
RN7SKP172-201ENST00000411341 SOX10P56693 466 aa12.51□□□□□ -0.41
RN7SKP172-201ENST00000411341 TIMM10P62072 90 aa12.51□□□□□ -0.41
RN7SKP172-201ENST00000411341 TCP10Q12799 353 aa12.51□□□□□ -0.41
RN7SKP172-201ENST00000411341 VGLL4Q14135 290 aa12.51□□□□□ -0.41
RN7SKP172-201ENST00000411341 KIF22Q14807 665 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms