RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 GUCA2AQ02747 115 aa8.96□□□□□ -0.98
CXCR4-202ENST00000409817 ANKRD1Q15327 319 aa8.96□□□□□ -0.98
CXCR4-202ENST00000409817 PRPF38BQ5VTL8 546 aaKnown RBP8.96□□□□□ -0.98
CXCR4-202ENST00000409817 CREB3L3Q68CJ9 461 aa8.96□□□□□ -0.98
CXCR4-202ENST00000409817 PRPF40BQ6NWY9 871 aaKnown RBP8.96□□□□□ -0.98
CXCR4-202ENST00000409817 NGLY1Q96IV0 654 aa8.96□□□□□ -0.98
CXCR4-202ENST00000409817 ZNF512BQ96KM6 892 aaPredicted RBP8.96□□□□□ -0.98
CXCR4-202ENST00000409817 SLC4A5Q9BY07 1137 aa8.96□□□□□ -0.98
CXCR4-202ENST00000409817 PAG1Q9NWQ8 432 aa8.96□□□□□ -0.98
CXCR4-202ENST00000409817 ZNF652Q9Y2D9 606 aa8.96□□□□□ -0.98
CXCR4-202ENST00000409817 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.96□□□□□ -0.98
CXCR4-202ENST00000409817 RPAP1Q9BWH6 1393 aaPredicted RBP8.95□□□□□ -0.98
CXCR4-202ENST00000409817 ARHGAP33O14559 1287 aa8.95□□□□□ -0.98
CXCR4-202ENST00000409817 TAF5LO75529 589 aa8.95□□□□□ -0.98
CXCR4-202ENST00000409817 ZFYP08048 801 aaPredicted RBP8.95□□□□□ -0.98
CXCR4-202ENST00000409817 IFIT1P09914 478 aaKnown RBP8.95□□□□□ -0.98
CXCR4-202ENST00000409817 ITGA6P23229 1130 aa8.95□□□□□ -0.98
CXCR4-202ENST00000409817 GPTP24298 496 aa8.95□□□□□ -0.98
CXCR4-202ENST00000409817 SSFA2P28290 1259 aa8.95□□□□□ -0.98
CXCR4-202ENST00000409817 VARS2Q5ST30 1063 aaKnown RBP8.95□□□□□ -0.98
CXCR4-202ENST00000409817 CLEC4GQ6UXB4 293 aa8.95□□□□□ -0.98
CXCR4-202ENST00000409817 RUFY3Q7L099 469 aa8.95□□□□□ -0.98
CXCR4-202ENST00000409817 ZNF594Q96JF6 807 aaPredicted RBP8.95□□□□□ -0.98
CXCR4-202ENST00000409817 DNAJC2Q99543 621 aaKnown RBP8.95□□□□□ -0.98
CXCR4-202ENST00000409817 SLC27A2O14975 620 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 AP1G2O75843 785 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 BAG4O95429 457 aaKnown RBP8.94□□□□□ -0.98
CXCR4-202ENST00000409817 CASTP20810 708 aaKnown RBP8.94□□□□□ -0.98
CXCR4-202ENST00000409817 USP46P62068 366 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 TIMM10P62072 90 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 GORABQ5T7V8 394 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 LDHAL6AQ6ZMR3 332 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 ZGPATQ8N5A5 531 aaKnown RBP8.94□□□□□ -0.98
CXCR4-202ENST00000409817 ACSBG1Q96GR2 724 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 JAKMIP1Q96N16 626 aaKnown RBP8.94□□□□□ -0.98
CXCR4-202ENST00000409817 UTP14AQ9BVJ6 771 aaKnown RBP8.94□□□□□ -0.98
CXCR4-202ENST00000409817 PUS3Q9BZE2 481 aaKnown RBP8.94□□□□□ -0.98
CXCR4-202ENST00000409817 PDRG1Q9NUG6 133 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 TBC1D2BQ9UPU7 963 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 RIPOR2Q9Y4F9 1068 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 COL5A3P25940 1745 aaPredicted RBP8.94□□□□□ -0.98
CXCR4-202ENST00000409817 RTL9Q8NET4 1388 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 LRP5O75197 1615 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 CAMTA2O94983 1202 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 USP17L8P0C7I0 530 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 AK2P54819 239 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 TTC39AQ5SRH9 613 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 C8orf37Q96NL8 207 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 DSCC1Q9BVC3 393 aa8.94□□□□□ -0.98
CXCR4-202ENST00000409817 UBN2Q6ZU65 1347 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 MROH5Q6ZUA9 1318 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 CNTNAP4Q9C0A0 1308 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 RIC1Q4ADV7 1423 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 GOLIM4O00461 696 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 BRD1O95696 1058 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 HMGB1P09429 215 aaKnown RBP8.93□□□□□ -0.98
CXCR4-202ENST00000409817 FDX1P10109 184 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 ITPK1Q13572 414 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 ATP2B3Q16720 1220 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 FAM98CQ17RN3 349 aaKnown RBP8.93□□□□□ -0.98
CXCR4-202ENST00000409817 METTL24Q5JXM2 366 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 ZMYM1Q5SVZ6 1142 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 L1TD1Q5T7N2 865 aaKnown RBP8.93□□□□□ -0.98
CXCR4-202ENST00000409817 BLOC1S2Q6QNY1 142 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 DDX46Q7L014 1031 aaKnown RBP8.93□□□□□ -0.98
CXCR4-202ENST00000409817 XAGE2Q96GT9 111 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 GJD4Q96KN9 370 aaPredicted RBP8.93□□□□□ -0.98
CXCR4-202ENST00000409817 GREM2Q9H772 168 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 CNNM1Q9NRU3 951 aa8.93□□□□□ -0.98
CXCR4-202ENST00000409817 WDR33Q9C0J8 1336 aaKnown RBP8.93□□□□□ -0.98
CXCR4-202ENST00000409817 LAMB2P55268 1798 aa8.92□□□□□ -0.98
CXCR4-202ENST00000409817 THSD7AQ9UPZ6 1657 aa8.92□□□□□ -0.98
CXCR4-202ENST00000409817 RNF113AO15541 343 aaKnown RBP8.92□□□□□ -0.98
CXCR4-202ENST00000409817 PDE8BO95263 885 aa8.92□□□□□ -0.98
CXCR4-202ENST00000409817 TTF1Q15361 905 aaPredicted RBP8.92□□□□□ -0.98
CXCR4-202ENST00000409817 RC3H1Q5TC82 1133 aaKnown RBP8.92□□□□□ -0.98
CXCR4-202ENST00000409817 ZSCAN25Q6NSZ9 544 aa8.92□□□□□ -0.98
CXCR4-202ENST00000409817 ZNF589Q86UQ0 364 aaPredicted RBP8.92□□□□□ -0.98
CXCR4-202ENST00000409817 EDC3Q96F86 508 aaKnown RBP8.92□□□□□ -0.98
CXCR4-202ENST00000409817 VPS9D1Q9Y2B5 631 aa8.92□□□□□ -0.98
CXCR4-202ENST00000409817 BCORQ6W2J9 1755 aa8.92□□□□□ -0.98
CXCR4-202ENST00000409817 MYH14Q7Z406 1995 aaKnown RBP8.92□□□□□ -0.98
CXCR4-202ENST00000409817 A0A0G2JS52 829 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 GPR37L1O60883 481 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 UQCRFS1P1P0C7P4 283 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 RPS6KB1P23443 525 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 KLHL40Q2TBA0 621 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 ADCK5Q3MIX3 580 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 CCDC152Q4G0S7 254 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 VGLL2Q8N8G2 317 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 USP21Q9UK80 565 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 PUM3Q15397 648 aaKnown RBP8.91□□□□□ -0.98
CXCR4-202ENST00000409817 SUSD4Q5VX71 490 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 LPIN2Q92539 896 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 CHMP4CQ96CF2 233 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.91□□□□□ -0.98
CXCR4-202ENST00000409817 ZDHHC9Q9Y397 364 aa8.91□□□□□ -0.98
CXCR4-202ENST00000409817 NHSQ6T4R5 1651 aa8.9□□□□□ -0.98
CXCR4-202ENST00000409817 NTSR2O95665 410 aa8.9□□□□□ -0.98
CXCR4-202ENST00000409817 SYNE4Q8N205 404 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms