RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 A0A1B0GUL6 1792 aa18.1■□□□□ 0.49
NIF3L1-205ENST00000409588 F8W031 263 aaPredicted RBP18.1■□□□□ 0.49
NIF3L1-205ENST00000409588 RBM5P52756 815 aaKnown RBP eCLIP18.1■□□□□ 0.49
NIF3L1-205ENST00000409588 KLHDC4Q8TBB5 520 aa18.1■□□□□ 0.49
NIF3L1-205ENST00000409588 PRMT6Q96LA8 375 aaPredicted RBP18.1■□□□□ 0.49
NIF3L1-205ENST00000409588 TTF2Q9UNY4 1162 aaKnown RBP18.1■□□□□ 0.49
NIF3L1-205ENST00000409588 LRRFIP2Q9Y608 721 aaKnown RBP18.1■□□□□ 0.49
NIF3L1-205ENST00000409588 PPP1R12BO60237 982 aaPredicted RBP18.09■□□□□ 0.49
NIF3L1-205ENST00000409588 KIF23Q02241 960 aaPredicted RBP18.09■□□□□ 0.49
NIF3L1-205ENST00000409588 MTX1Q13505 466 aa18.09■□□□□ 0.49
NIF3L1-205ENST00000409588 TTLL12Q14166 644 aaPredicted RBP18.09■□□□□ 0.49
NIF3L1-205ENST00000409588 ATG9AQ7Z3C6 839 aa18.09■□□□□ 0.49
NIF3L1-205ENST00000409588 GNL3LQ9NVN8 582 aaKnown RBP18.09■□□□□ 0.49
NIF3L1-205ENST00000409588 MAST3O60307 1309 aa18.08■□□□□ 0.49
NIF3L1-205ENST00000409588 TRIM27P14373 513 aa18.08■□□□□ 0.48
NIF3L1-205ENST00000409588 BCAMP50895 628 aa18.08■□□□□ 0.48
NIF3L1-205ENST00000409588 ZKSCAN2Q63HK3 967 aa18.08■□□□□ 0.48
NIF3L1-205ENST00000409588 WDR66Q8TBY9 1149 aa18.08■□□□□ 0.48
NIF3L1-205ENST00000409588 PAPPA2Q9BXP8 1791 aa18.08■□□□□ 0.48
NIF3L1-205ENST00000409588 MAP3K11Q16584 847 aa18.07■□□□□ 0.48
NIF3L1-205ENST00000409588 FRAT1Q92837 279 aaPredicted RBP18.07■□□□□ 0.48
NIF3L1-205ENST00000409588 MEIS3Q99687 375 aa18.07■□□□□ 0.48
NIF3L1-205ENST00000409588 UBE2Q2LH0YL09 131 aa18.06■□□□□ 0.48
NIF3L1-205ENST00000409588 SEMA3EO15041 775 aa18.06■□□□□ 0.48
NIF3L1-205ENST00000409588 BCAR3O75815 825 aa18.06■□□□□ 0.48
NIF3L1-205ENST00000409588 GNAI2P04899 355 aa18.06■□□□□ 0.48
NIF3L1-205ENST00000409588 TNNI2P48788 182 aa18.06■□□□□ 0.48
NIF3L1-205ENST00000409588 LDLRAD1Q5T700 205 aa18.06■□□□□ 0.48
NIF3L1-205ENST00000409588 PRAMEF18Q5VWM3 479 aa18.06■□□□□ 0.48
NIF3L1-205ENST00000409588 DZIP1LQ8IYY4 767 aaKnown RBP18.06■□□□□ 0.48
NIF3L1-205ENST00000409588 TEKT1Q969V4 418 aa18.06■□□□□ 0.48
NIF3L1-205ENST00000409588 CSRNP1Q96S65 589 aa18.06■□□□□ 0.48
NIF3L1-205ENST00000409588 JAG2Q9Y219 1238 aa18.06■□□□□ 0.48
NIF3L1-205ENST00000409588 AKAP2Q9Y2D5 859 aa18.06■□□□□ 0.48
NIF3L1-205ENST00000409588 ZBED9Q6R2W3 1325 aa18.05■□□□□ 0.48
NIF3L1-205ENST00000409588 CRKP46108 304 aa18.05■□□□□ 0.48
NIF3L1-205ENST00000409588 INHBEP58166 350 aa18.05■□□□□ 0.48
NIF3L1-205ENST00000409588 ATP2B3Q16720 1220 aa18.05■□□□□ 0.48
NIF3L1-205ENST00000409588 HHIPL2Q6UWX4 724 aa18.05■□□□□ 0.48
NIF3L1-205ENST00000409588 RASAL3Q86YV0 1011 aa18.05■□□□□ 0.48
NIF3L1-205ENST00000409588 SCAF8Q9UPN6 1271 aaKnown RBP18.05■□□□□ 0.48
NIF3L1-205ENST00000409588 SRGAP3O43295 1099 aa18.04■□□□□ 0.48
NIF3L1-205ENST00000409588 TM4SF4P48230 202 aa18.04■□□□□ 0.48
NIF3L1-205ENST00000409588 CHAF1AQ13111 956 aaPredicted RBP18.04■□□□□ 0.48
NIF3L1-205ENST00000409588 FKBP1CQ5VVH2 108 aa18.04■□□□□ 0.48
NIF3L1-205ENST00000409588 ZIC5Q96T25 663 aa18.04■□□□□ 0.48
NIF3L1-205ENST00000409588 SIL1Q9H173 461 aa18.04■□□□□ 0.48
NIF3L1-205ENST00000409588 VEZTQ9HBM0 779 aa18.04■□□□□ 0.48
NIF3L1-205ENST00000409588 ZNF70Q9UC06 446 aaPredicted RBP18.04■□□□□ 0.48
NIF3L1-205ENST00000409588 IREB2P48200 963 aaKnown RBP18.03■□□□□ 0.48
NIF3L1-205ENST00000409588 RASA3Q14644 834 aa18.03■□□□□ 0.48
NIF3L1-205ENST00000409588 HOOK2Q96ED9 719 aa18.03■□□□□ 0.48
NIF3L1-205ENST00000409588 SLC10A4Q96EP9 437 aa18.03■□□□□ 0.48
NIF3L1-205ENST00000409588 ZDHHC15Q96MV8 337 aa18.03■□□□□ 0.48
NIF3L1-205ENST00000409588 RNF186Q9NXI6 227 aa18.03■□□□□ 0.48
NIF3L1-205ENST00000409588 DENND2AQ9ULE3 1009 aa18.03■□□□□ 0.48
NIF3L1-205ENST00000409588 ANGEL1Q9UNK9 670 aaKnown RBP18.03■□□□□ 0.48
NIF3L1-205ENST00000409588 IQSEC3Q9UPP2 1182 aaPredicted RBP18.03■□□□□ 0.48
NIF3L1-205ENST00000409588 CLRN2A0PK11 232 aa18.02■□□□□ 0.48
NIF3L1-205ENST00000409588 SREBF2Q12772 1141 aa18.02■□□□□ 0.48
NIF3L1-205ENST00000409588 MOB2Q70IA6 237 aa18.02■□□□□ 0.48
NIF3L1-205ENST00000409588 ZGPATQ8N5A5 531 aaKnown RBP18.02■□□□□ 0.48
NIF3L1-205ENST00000409588 TDRD3Q9H7E2 651 aaKnown RBP18.02■□□□□ 0.48
NIF3L1-205ENST00000409588 TMOD2Q9NZR1 351 aa18.02■□□□□ 0.48
NIF3L1-205ENST00000409588 MS4A1P11836 297 aa18.01■□□□□ 0.47
NIF3L1-205ENST00000409588 FAM83AQ86UY5 434 aa18.01■□□□□ 0.47
NIF3L1-205ENST00000409588 PCDHAC2Q9Y5I4 1007 aa18.01■□□□□ 0.47
NIF3L1-205ENST00000409588 SALL1Q9NSC2 1324 aa18■□□□□ 0.47
NIF3L1-205ENST00000409588 TRPA1O75762 1119 aa18■□□□□ 0.47
NIF3L1-205ENST00000409588 ALDH1A1P00352 501 aa18■□□□□ 0.47
NIF3L1-205ENST00000409588 ZBTB48P10074 688 aaPredicted RBP18■□□□□ 0.47
NIF3L1-205ENST00000409588 FTSJ3Q8IY81 847 aaKnown RBP18■□□□□ 0.47
NIF3L1-205ENST00000409588 ANKRD13AQ8IZ07 590 aa18■□□□□ 0.47
NIF3L1-205ENST00000409588 CLUAP1Q96AJ1 413 aa18■□□□□ 0.47
NIF3L1-205ENST00000409588 ECM29Q5VYK3 1845 aa18■□□□□ 0.47
NIF3L1-205ENST00000409588 PDS5AQ29RF7 1337 aaKnown RBP17.99■□□□□ 0.47
NIF3L1-205ENST00000409588 G3BP1Q13283 466 aaKnown RBP eCLIP17.99■□□□□ 0.47
NIF3L1-205ENST00000409588 NOM1Q5C9Z4 860 aaKnown RBP17.99■□□□□ 0.47
NIF3L1-205ENST00000409588 NBPF12Q5TAG4 269 aaPredicted RBP17.99■□□□□ 0.47
NIF3L1-205ENST00000409588 PA2G4Q9UQ80 394 aaKnown RBP17.99■□□□□ 0.47
NIF3L1-205ENST00000409588 MANSC4A6NHS7 340 aaPredicted RBP17.98■□□□□ 0.47
NIF3L1-205ENST00000409588 USP2O75604 605 aaPredicted RBP17.98■□□□□ 0.47
NIF3L1-205ENST00000409588 LDHBP07195 334 aaKnown RBP17.98■□□□□ 0.47
NIF3L1-205ENST00000409588 PRKG1Q13976 671 aa17.98■□□□□ 0.47
NIF3L1-205ENST00000409588 MVPQ14764 893 aaKnown RBP17.98■□□□□ 0.47
NIF3L1-205ENST00000409588 SPRYD7Q5W111 196 aa17.98■□□□□ 0.47
NIF3L1-205ENST00000409588 SPTY2D1Q68D10 685 aaPredicted RBP17.98■□□□□ 0.47
NIF3L1-205ENST00000409588 APOBEC3HQ6NTF7 200 aaKnown RBP17.98■□□□□ 0.47
NIF3L1-205ENST00000409588 SLF2Q8IX21 1173 aa17.98■□□□□ 0.47
NIF3L1-205ENST00000409588 TMEM57Q8N5G2 664 aa17.98■□□□□ 0.47
NIF3L1-205ENST00000409588 TIMM10P62072 90 aa17.97■□□□□ 0.47
NIF3L1-205ENST00000409588 GRIK5Q16478 980 aa17.97■□□□□ 0.47
NIF3L1-205ENST00000409588 CCDC102BQ68D86 513 aa17.97■□□□□ 0.47
NIF3L1-205ENST00000409588 TEPSINQ96N21 525 aa17.97■□□□□ 0.47
NIF3L1-205ENST00000409588 CFHR5Q9BXR6 569 aa17.97■□□□□ 0.47
NIF3L1-205ENST00000409588 TSKSQ9UJT2 592 aa17.97■□□□□ 0.47
NIF3L1-205ENST00000409588 FARP1Q9Y4F1 1045 aaPredicted RBP17.97■□□□□ 0.47
NIF3L1-205ENST00000409588 A0A1B0GUL7 405 aa17.96■□□□□ 0.47
NIF3L1-205ENST00000409588 TCP10L2B9ZVM9 353 aa17.96■□□□□ 0.47
NIF3L1-205ENST00000409588 ATP8B2P98198 1209 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms