RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 TXLNBQ8N3L3 684 aa17.91■□□□□ 0.46
LIMS2-205ENST00000409455 MNS1Q8NEH6 495 aa17.91■□□□□ 0.46
LIMS2-205ENST00000409455 SDF4Q9BRK5 362 aa17.91■□□□□ 0.46
LIMS2-205ENST00000409455 XPO4Q9C0E2 1151 aaKnown RBP17.91■□□□□ 0.46
LIMS2-205ENST00000409455 PHLPP2Q6ZVD8 1323 aa17.91■□□□□ 0.46
LIMS2-205ENST00000409455 SCRN1Q12765 414 aa17.91■□□□□ 0.46
LIMS2-205ENST00000409455 USPL1Q5W0Q7 1092 aa17.91■□□□□ 0.46
LIMS2-205ENST00000409455 SMARCC2Q8TAQ2 1214 aa17.91■□□□□ 0.46
LIMS2-205ENST00000409455 USP28Q96RU2 1077 aa17.91■□□□□ 0.46
LIMS2-205ENST00000409455 SRRTQ9BXP5 876 aaKnown RBP17.91■□□□□ 0.46
LIMS2-205ENST00000409455 ORC3Q9UBD5 711 aaPredicted RBP17.91■□□□□ 0.46
LIMS2-205ENST00000409455 ETF1P62495 437 aaKnown RBP17.9■□□□□ 0.46
LIMS2-205ENST00000409455 IFNKQ9P0W0 207 aa17.9■□□□□ 0.46
LIMS2-205ENST00000409455 KCNQ2O43526 872 aa17.9■□□□□ 0.46
LIMS2-205ENST00000409455 SASH1O94885 1247 aa17.9■□□□□ 0.46
LIMS2-205ENST00000409455 TPM1P09493 284 aa17.9■□□□□ 0.46
LIMS2-205ENST00000409455 FOSBP53539 338 aa17.9■□□□□ 0.46
LIMS2-205ENST00000409455 ERCC4Q92889 916 aaPredicted RBP17.9■□□□□ 0.46
LIMS2-205ENST00000409455 BPIFA3Q9BQP9 254 aa17.9■□□□□ 0.46
LIMS2-205ENST00000409455 MYH15Q9Y2K3 1946 aa17.89■□□□□ 0.45
LIMS2-205ENST00000409455 CASP7P55210 303 aa17.89■□□□□ 0.45
LIMS2-205ENST00000409455 RAD51AP2Q09MP3 1159 aa17.89■□□□□ 0.45
LIMS2-205ENST00000409455 MRPS27Q92552 414 aaKnown RBP17.89■□□□□ 0.45
LIMS2-205ENST00000409455 TLR7Q9NYK1 1049 aaKnown RBP17.89■□□□□ 0.45
LIMS2-205ENST00000409455 DNAI1Q9UI46 699 aa17.89■□□□□ 0.45
LIMS2-205ENST00000409455 ARFGEF2Q9Y6D5 1785 aa17.89■□□□□ 0.45
LIMS2-205ENST00000409455 POLR3GO15318 223 aaPredicted RBP17.89■□□□□ 0.45
LIMS2-205ENST00000409455 TRERF1Q96PN7 1200 aa17.89■□□□□ 0.45
LIMS2-205ENST00000409455 CWC25Q9NXE8 425 aaPredicted RBP17.89■□□□□ 0.45
LIMS2-205ENST00000409455 ZBTB1Q9Y2K1 713 aa17.89■□□□□ 0.45
LIMS2-205ENST00000409455 H7C1W4 665 aa17.88■□□□□ 0.45
LIMS2-205ENST00000409455 ATP8B1O43520 1251 aa17.88■□□□□ 0.45
LIMS2-205ENST00000409455 KLHDC4Q8TBB5 520 aa17.88■□□□□ 0.45
LIMS2-205ENST00000409455 DOT1LQ8TEK3 1739 aa17.88■□□□□ 0.45
LIMS2-205ENST00000409455 GPS2Q13227 327 aa17.88■□□□□ 0.45
LIMS2-205ENST00000409455 FMR1NBQ8N0W7 255 aaPredicted RBP17.88■□□□□ 0.45
LIMS2-205ENST00000409455 NSUN7Q8NE18 718 aaKnown RBP17.88■□□□□ 0.45
LIMS2-205ENST00000409455 PTPDC1A2A3K4 754 aa17.87■□□□□ 0.45
LIMS2-205ENST00000409455 PFKFB2O60825 505 aa17.87■□□□□ 0.45
LIMS2-205ENST00000409455 TCIRG1Q13488 830 aa17.87■□□□□ 0.45
LIMS2-205ENST00000409455 DPCR1Q3MIW9 517 aa17.87■□□□□ 0.45
LIMS2-205ENST00000409455 MEX3CQ5U5Q3 659 aaKnown RBP17.87■□□□□ 0.45
LIMS2-205ENST00000409455 CCDC191Q8NCU4 936 aa17.87■□□□□ 0.45
LIMS2-205ENST00000409455 U3KPZ7 1027 aaPredicted RBP17.87■□□□□ 0.45
LIMS2-205ENST00000409455 EFCAB8A8MWE9 144 aa17.87■□□□□ 0.45
LIMS2-205ENST00000409455 KIF6Q6ZMV9 814 aa17.87■□□□□ 0.45
LIMS2-205ENST00000409455 NEK11Q8NG66 645 aa17.87■□□□□ 0.45
LIMS2-205ENST00000409455 KIAA1468Q9P260 1216 aa17.87■□□□□ 0.45
LIMS2-205ENST00000409455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.87■□□□□ 0.45
LIMS2-205ENST00000409455 ATP6V1AP38606 617 aa17.86■□□□□ 0.45
LIMS2-205ENST00000409455 RABL6Q3YEC7 729 aaPredicted RBP17.86■□□□□ 0.45
LIMS2-205ENST00000409455 TRIM34Q9BYJ4 488 aa17.86■□□□□ 0.45
LIMS2-205ENST00000409455 FEZ2Q9UHY8 353 aaPredicted RBP17.86■□□□□ 0.45
LIMS2-205ENST00000409455 LOC102724428A0A0B4J2F2 783 aa17.86■□□□□ 0.45
LIMS2-205ENST00000409455 SIK1P57059 783 aa17.86■□□□□ 0.45
LIMS2-205ENST00000409455 MUM1L1Q5H9M0 696 aa17.86■□□□□ 0.45
LIMS2-205ENST00000409455 CCDC158Q5M9N0 1113 aa17.86■□□□□ 0.45
LIMS2-205ENST00000409455 ISCA1Q9BUE6 129 aa17.86■□□□□ 0.45
LIMS2-205ENST00000409455 LRRC2Q9BYS8 371 aa17.86■□□□□ 0.45
LIMS2-205ENST00000409455 SIL1Q9H173 461 aa17.86■□□□□ 0.45
LIMS2-205ENST00000409455 TADA3O75528 432 aa17.85■□□□□ 0.45
LIMS2-205ENST00000409455 URI1O94763 535 aaPredicted RBP17.85■□□□□ 0.45
LIMS2-205ENST00000409455 HMGB1P09429 215 aaKnown RBP17.85■□□□□ 0.45
LIMS2-205ENST00000409455 LRRFIP1Q32MZ4 808 aaKnown RBP17.85■□□□□ 0.45
LIMS2-205ENST00000409455 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
LIMS2-205ENST00000409455 HLFQ16534 295 aa17.84■□□□□ 0.45
LIMS2-205ENST00000409455 ADALQ6DHV7 355 aa17.84■□□□□ 0.45
LIMS2-205ENST00000409455 PCDHA7Q9UN72 937 aa17.84■□□□□ 0.45
LIMS2-205ENST00000409455 MAP3K15Q6ZN16 1313 aa17.84■□□□□ 0.45
LIMS2-205ENST00000409455 A0A1B0GVL5 298 aa17.84■□□□□ 0.45
LIMS2-205ENST00000409455 A0A1W2PQ27 194 aa17.84■□□□□ 0.45
LIMS2-205ENST00000409455 A0A1W2PQ64 194 aa17.84■□□□□ 0.45
LIMS2-205ENST00000409455 A0A1W2PQD8 194 aa17.84■□□□□ 0.45
LIMS2-205ENST00000409455 CYP21A2P08686 494 aa17.84■□□□□ 0.45
LIMS2-205ENST00000409455 COL15A1P39059 1388 aa17.84■□□□□ 0.45
LIMS2-205ENST00000409455 FOXO4P98177 505 aa17.83■□□□□ 0.45
LIMS2-205ENST00000409455 LMBR1LQ6UX01 489 aa17.83■□□□□ 0.45
LIMS2-205ENST00000409455 AFDNP55196 1824 aaKnown RBP17.83■□□□□ 0.45
LIMS2-205ENST00000409455 SEC31AO94979 1220 aaKnown RBP17.83■□□□□ 0.44
LIMS2-205ENST00000409455 RFX5P48382 616 aaPredicted RBP17.83■□□□□ 0.44
LIMS2-205ENST00000409455 NDUFA8P51970 172 aa17.83■□□□□ 0.44
LIMS2-205ENST00000409455 SF3A1Q15459 793 aaKnown RBP17.83■□□□□ 0.44
LIMS2-205ENST00000409455 GIGYF2Q6Y7W6 1299 aaKnown RBP17.83■□□□□ 0.44
LIMS2-205ENST00000409455 KRBA2Q6ZNG9 492 aa17.83■□□□□ 0.44
LIMS2-205ENST00000409455 CARD6Q9BX69 1037 aa17.83■□□□□ 0.44
LIMS2-205ENST00000409455 NUP188Q5SRE5 1749 aa17.83■□□□□ 0.44
LIMS2-205ENST00000409455 CTDNEP1O95476 244 aa17.82■□□□□ 0.44
LIMS2-205ENST00000409455 OAS2P29728 719 aaKnown RBP17.82■□□□□ 0.44
LIMS2-205ENST00000409455 IL6STP40189 918 aaPredicted RBP17.82■□□□□ 0.44
LIMS2-205ENST00000409455 ITPK1Q13572 414 aa17.82■□□□□ 0.44
LIMS2-205ENST00000409455 INTS5Q6P9B9 1019 aaKnown RBP17.82■□□□□ 0.44
LIMS2-205ENST00000409455 EDC3Q96F86 508 aaKnown RBP17.82■□□□□ 0.44
LIMS2-205ENST00000409455 TBC1D2BQ9UPU7 963 aa17.82■□□□□ 0.44
LIMS2-205ENST00000409455 PALLDQ8WX93 1383 aa17.82■□□□□ 0.44
LIMS2-205ENST00000409455 SLC3A2P08195 630 aaKnown RBP17.82■□□□□ 0.44
LIMS2-205ENST00000409455 EVCP57679 992 aa17.82■□□□□ 0.44
LIMS2-205ENST00000409455 GUCY1B3Q02153 619 aa17.82■□□□□ 0.44
LIMS2-205ENST00000409455 PTPN12Q05209 780 aaKnown RBP17.82■□□□□ 0.44
LIMS2-205ENST00000409455 TRIM28Q13263 835 aaKnown RBP17.82■□□□□ 0.44
LIMS2-205ENST00000409455 TRIM65Q6PJ69 517 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms