RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 RNF214Q8ND24 703 aa18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 LARP6Q9BRS8 491 aaKnown RBP18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 ZKSCAN5Q9Y2L8 839 aa18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 ZNF609O15014 1411 aa18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 ZNF804BA4D1E1 1349 aa18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 LTBP1Q14766 1721 aa18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 WTIPA6NIX2 430 aaPredicted RBP18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 SNAP23O00161 211 aa18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 RNF20Q5VTR2 975 aa18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 CCDC8Q9H0W5 538 aaPredicted RBP18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 SNED1Q8TER0 1413 aa18.85■□□□□ 0.61
CHRFAM7A-203ENST00000401522 ATP2B4P23634 1241 aa18.85■□□□□ 0.61
CHRFAM7A-203ENST00000401522 SOGA3Q5TF21 947 aa18.85■□□□□ 0.61
CHRFAM7A-203ENST00000401522 FAM227BQ96M60 508 aa18.85■□□□□ 0.61
CHRFAM7A-203ENST00000401522 NEUROD6Q96NK8 337 aa18.85■□□□□ 0.61
CHRFAM7A-203ENST00000401522 MTMR6Q9Y217 621 aa18.85■□□□□ 0.61
CHRFAM7A-203ENST00000401522 SLC27A2O14975 620 aa18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 IFIT1P09914 478 aaKnown RBP18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 TERF1P54274 439 aa18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 DPP8Q6V1X1 898 aaPredicted RBP18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 TBC1D16Q8TBP0 767 aa18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 FSD1Q9BTV5 496 aa18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 ALDH8A1Q9H2A2 487 aaPredicted RBP18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 ZNF219Q9P2Y4 722 aaPredicted RBP18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 POLLQ9UGP5 575 aa18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 DBNLQ9UJU6 430 aaKnown RBP18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 GGA1Q9UJY5 639 aa18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 MED23Q9ULK4 1368 aa18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 SLC5A1P13866 664 aa18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 ANKRD1Q15327 319 aa18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 RTKN2Q8IZC4 609 aa18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 XAGE2Q96GT9 111 aa18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 TLR7Q9NYK1 1049 aaKnown RBP18.84■□□□□ 0.61
CHRFAM7A-203ENST00000401522 ME3Q16798 604 aa18.83■□□□□ 0.6
CHRFAM7A-203ENST00000401522 CCDC93Q567U6 631 aa18.83■□□□□ 0.6
CHRFAM7A-203ENST00000401522 DBNDD2Q9BQY9 259 aa18.83■□□□□ 0.6
CHRFAM7A-203ENST00000401522 RTFDC1Q9BY42 306 aaPredicted RBP18.83■□□□□ 0.6
CHRFAM7A-203ENST00000401522 HMG20BQ9P0W2 317 aa18.83■□□□□ 0.6
CHRFAM7A-203ENST00000401522 BCS1LQ9Y276 419 aa18.83■□□□□ 0.6
CHRFAM7A-203ENST00000401522 UFL1O94874 794 aa18.82■□□□□ 0.6
CHRFAM7A-203ENST00000401522 C15orf52Q6ZUT6 534 aaKnown RBP18.82■□□□□ 0.6
CHRFAM7A-203ENST00000401522 BOLA2Q9H3K6 86 aa18.82■□□□□ 0.6
CHRFAM7A-203ENST00000401522 WWC3Q9ULE0 1092 aa18.82■□□□□ 0.6
CHRFAM7A-203ENST00000401522 GOLGB1Q14789 3259 aaKnown RBP18.82■□□□□ 0.6
CHRFAM7A-203ENST00000401522 IRS2Q9Y4H2 1338 aa18.82■□□□□ 0.6
CHRFAM7A-203ENST00000401522 A0A0D9SFI3 127 aa18.82■□□□□ 0.6
CHRFAM7A-203ENST00000401522 ADORA1P30542 326 aa18.82■□□□□ 0.6
CHRFAM7A-203ENST00000401522 ST3GAL1Q11201 340 aa18.82■□□□□ 0.6
CHRFAM7A-203ENST00000401522 DUOX1Q9NRD9 1551 aa18.81■□□□□ 0.6
CHRFAM7A-203ENST00000401522 RFX7Q2KHR2 1363 aa18.81■□□□□ 0.6
CHRFAM7A-203ENST00000401522 FIBPO43427 364 aa18.81■□□□□ 0.6
CHRFAM7A-203ENST00000401522 TSGA10IPQ3SY00 556 aa18.81■□□□□ 0.6
CHRFAM7A-203ENST00000401522 BLOC1S2Q6QNY1 142 aa18.81■□□□□ 0.6
CHRFAM7A-203ENST00000401522 TPCN1Q9ULQ1 816 aa18.81■□□□□ 0.6
CHRFAM7A-203ENST00000401522 ARAP2Q8WZ64 1704 aa18.81■□□□□ 0.6
CHRFAM7A-203ENST00000401522 C6orf229H3BNL8 230 aa18.8■□□□□ 0.6
CHRFAM7A-203ENST00000401522 ATP5JP18859 108 aa18.8■□□□□ 0.6
CHRFAM7A-203ENST00000401522 PDCP20941 246 aa18.8■□□□□ 0.6
CHRFAM7A-203ENST00000401522 PSMD1Q99460 953 aa18.8■□□□□ 0.6
CHRFAM7A-203ENST00000401522 ARFGEF1Q9Y6D6 1849 aa18.8■□□□□ 0.6
CHRFAM7A-203ENST00000401522 RPS6KB1P23443 525 aa18.79■□□□□ 0.6
CHRFAM7A-203ENST00000401522 KLRK1P26718 216 aa18.79■□□□□ 0.6
CHRFAM7A-203ENST00000401522 CAVIN4Q5BKX8 364 aa18.79■□□□□ 0.6
CHRFAM7A-203ENST00000401522 CCDC158Q5M9N0 1113 aa18.79■□□□□ 0.6
CHRFAM7A-203ENST00000401522 GORABQ5T7V8 394 aa18.79■□□□□ 0.6
CHRFAM7A-203ENST00000401522 TXNRD3Q86VQ6 643 aa18.79■□□□□ 0.6
CHRFAM7A-203ENST00000401522 SUPT20HQ8NEM7 779 aa18.79■□□□□ 0.6
CHRFAM7A-203ENST00000401522 FAM84BQ96KN1 310 aaPredicted RBP18.79■□□□□ 0.6
CHRFAM7A-203ENST00000401522 TCHHQ07283 1943 aa18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 VPS37CA5D8V6 355 aaPredicted RBP18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 PTMAP06454 111 aaKnown RBP18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 DNM1Q05193 864 aaKnown RBP18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 KRT32Q14532 448 aa18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 CCDC102BQ68D86 513 aa18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 FBXO33Q7Z6M2 555 aa18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 NECAB1Q8N987 351 aa18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 ZNF512BQ96KM6 892 aaPredicted RBP18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 EYA3Q99504 573 aa18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 GYG1P46976 350 aa18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 BCAMP50895 628 aa18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 WASHC4Q2M389 1173 aa18.78■□□□□ 0.6
CHRFAM7A-203ENST00000401522 RRP9O43818 475 aaKnown RBP18.77■□□□□ 0.6
CHRFAM7A-203ENST00000401522 FKBP4Q02790 459 aaKnown RBP eCLIP18.77■□□□□ 0.6
CHRFAM7A-203ENST00000401522 LARP1BQ659C4 914 aaKnown RBP18.77■□□□□ 0.6
CHRFAM7A-203ENST00000401522 GPR101Q96P66 508 aaPredicted RBP18.77■□□□□ 0.6
CHRFAM7A-203ENST00000401522 ZC3H12CQ9C0D7 883 aaKnown RBP18.77■□□□□ 0.6
CHRFAM7A-203ENST00000401522 VPS33BQ9H267 617 aa18.77■□□□□ 0.6
CHRFAM7A-203ENST00000401522 ZBTB22O15209 634 aa18.76■□□□□ 0.59
CHRFAM7A-203ENST00000401522 HIBADHP31937 336 aaKnown RBP18.76■□□□□ 0.59
CHRFAM7A-203ENST00000401522 PHKA1P46020 1223 aa18.76■□□□□ 0.59
CHRFAM7A-203ENST00000401522 FER1L6Q2WGJ9 1857 aa18.76■□□□□ 0.59
CHRFAM7A-203ENST00000401522 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.76■□□□□ 0.59
CHRFAM7A-203ENST00000401522 ARID4AP29374 1257 aaPredicted RBP18.75■□□□□ 0.59
CHRFAM7A-203ENST00000401522 KRT85P78386 507 aa18.75■□□□□ 0.59
CHRFAM7A-203ENST00000401522 TTC39AQ5SRH9 613 aa18.75■□□□□ 0.59
CHRFAM7A-203ENST00000401522 ZNF589Q86UQ0 364 aaPredicted RBP18.75■□□□□ 0.59
CHRFAM7A-203ENST00000401522 VPS37DQ86XT2 251 aa18.75■□□□□ 0.59
CHRFAM7A-203ENST00000401522 FUCA2Q9BTY2 467 aa18.75■□□□□ 0.59
CHRFAM7A-203ENST00000401522 ELP1O95163 1332 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms