RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 SLC26A6Q9BXS9 759 aa14.04□□□□□ -0.16
CACNA1C-209ENST00000399603 TRIM4Q9C037 500 aa14.04□□□□□ -0.16
CACNA1C-209ENST00000399603 SUFUQ9UMX1 484 aa14.04□□□□□ -0.16
CACNA1C-209ENST00000399603 AMOTQ4VCS5 1084 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 RPAINQ86UA6 219 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 PALM3A6NDB9 673 aaPredicted RBP14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 IFIT1P09914 478 aaKnown RBP14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 GRM1Q13255 1194 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 PLS1Q14651 629 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 MICU3Q86XE3 530 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 CCDC42Q96M95 316 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 MYD88Q99836 296 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 SUPT6HQ7KZ85 1726 aaKnown RBP14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 SYKP43405 635 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 KANK3Q6NY19 840 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 ARHGAP42A6NI28 874 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 NUDCD3Q8IVD9 361 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 TRIM35Q9UPQ4 493 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 AOPEPQ8N6M6 819 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 SH2B1Q9NRF2 756 aaPredicted RBP14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 USP16Q9Y5T5 823 aa14.03□□□□□ -0.16
CACNA1C-209ENST00000399603 RNF8O76064 485 aa14.02□□□□□ -0.16
CACNA1C-209ENST00000399603 ATP5DP30049 168 aa14.02□□□□□ -0.16
CACNA1C-209ENST00000399603 RASIP1Q5U651 963 aa14.02□□□□□ -0.16
CACNA1C-209ENST00000399603 AFAP1L2Q8N4X5 818 aa14.02□□□□□ -0.16
CACNA1C-209ENST00000399603 TRIM31Q9BZY9 425 aa14.02□□□□□ -0.16
CACNA1C-209ENST00000399603 KRT9P35527 623 aa14.02□□□□□ -0.16
CACNA1C-209ENST00000399603 ARHGAP24Q8N264 748 aa14.02□□□□□ -0.16
CACNA1C-209ENST00000399603 CTAGE1Q96RT6 745 aa14.02□□□□□ -0.16
CACNA1C-209ENST00000399603 USP37Q86T82 979 aa14.02□□□□□ -0.17
CACNA1C-209ENST00000399603 GPR161Q8N6U8 529 aaKnown RBP14.02□□□□□ -0.17
CACNA1C-209ENST00000399603 MGARPQ8TDB4 240 aa14.02□□□□□ -0.17
CACNA1C-209ENST00000399603 NUCKS1Q9H1E3 243 aaKnown RBP14.02□□□□□ -0.17
CACNA1C-209ENST00000399603 TMED1Q13445 227 aa14.02□□□□□ -0.17
CACNA1C-209ENST00000399603 ZSCAN23Q3MJ62 389 aa14.02□□□□□ -0.17
CACNA1C-209ENST00000399603 TMTC4Q5T4D3 741 aa14.02□□□□□ -0.17
CACNA1C-209ENST00000399603 IARSP41252 1262 aaKnown RBP14.02□□□□□ -0.17
CACNA1C-209ENST00000399603 KRT83P78385 493 aa14.02□□□□□ -0.17
CACNA1C-209ENST00000399603 RNF34Q969K3 372 aa14.02□□□□□ -0.17
CACNA1C-209ENST00000399603 ACEP12821 1306 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 CHRNA2Q15822 529 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 RMND1Q9NWS8 449 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 TNNC1P63316 161 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 TAF7Q15545 349 aaPredicted RBP14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 HHATQ5VTY9 493 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 GPATCH8Q9UKJ3 1502 aaKnown RBP14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 GIGYF1O75420 1035 aaPredicted RBP14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 TMEM67Q5HYA8 995 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 SEL1L2Q5TEA6 688 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 HAND2P61296 217 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 LIMCH1Q9UPQ0 1083 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 TMOD3Q9NYL9 352 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 PTPN23Q9H3S7 1636 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 SKOR1P84550 965 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 RPS6KA2Q15349 733 aa14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 PDCD2Q16342 344 aaPredicted RBP14.01□□□□□ -0.17
CACNA1C-209ENST00000399603 SCAF11Q99590 1463 aaKnown RBP14□□□□□ -0.17
CACNA1C-209ENST00000399603 ZBBXA8MT70 800 aa14□□□□□ -0.17
CACNA1C-209ENST00000399603 UTP14CQ5TAP6 766 aaKnown RBP14□□□□□ -0.17
CACNA1C-209ENST00000399603 CCDC8Q9H0W5 538 aaPredicted RBP14□□□□□ -0.17
CACNA1C-209ENST00000399603 UBXN1Q04323 297 aa14□□□□□ -0.17
CACNA1C-209ENST00000399603 PPP2R3AQ06190 1150 aa14□□□□□ -0.17
CACNA1C-209ENST00000399603 CABS1Q96KC9 395 aa14□□□□□ -0.17
CACNA1C-209ENST00000399603 ASIC1P78348 528 aa14□□□□□ -0.17
CACNA1C-209ENST00000399603 RAPGEF1Q13905 1077 aa14□□□□□ -0.17
CACNA1C-209ENST00000399603 MRFAP1L1Q96HT8 127 aa14□□□□□ -0.17
CACNA1C-209ENST00000399603 KLHDC4Q8TBB5 520 aa14□□□□□ -0.17
CACNA1C-209ENST00000399603 LRRC27Q9C0I9 530 aa14□□□□□ -0.17
CACNA1C-209ENST00000399603 ORC3Q9UBD5 711 aaPredicted RBP14□□□□□ -0.17
CACNA1C-209ENST00000399603 NXNQ6DKJ4 435 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 KRT28Q7Z3Y7 464 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 OGFRQ9NZT2 677 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 I3L4J1 428 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 LMOD1P29536 600 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 MAP3K12Q12852 859 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 NEK1Q96PY6 1258 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 GOLGA6CA6NDK9 693 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 GOLGA6DP0CG33 693 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 STX17P56962 302 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 KAT14Q9H8E8 782 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 GOLGA6AQ9NYA3 693 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 DDX41Q9UJV9 622 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 RIPOR2Q9Y4F9 1068 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 TTLL3Q9Y4R7 772 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 CASC4Q6P4E1 433 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 CERS3Q8IU89 383 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 NEK11Q8NG66 645 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 TSPY2A6NKD2 308 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 KRT5P13647 590 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 MX1P20591 662 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 RMDN2Q96LZ7 410 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 TRIM55Q9BYV6 548 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-209ENST00000399603 DAPK3O43293 454 aa13.98□□□□□ -0.17
CACNA1C-209ENST00000399603 RPGRQ92834 1020 aaKnown RBP13.98□□□□□ -0.17
CACNA1C-209ENST00000399603 DNAJC25Q9H1X3 360 aa13.98□□□□□ -0.17
CACNA1C-209ENST00000399603 HMGB1P09429 215 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms