RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 GNL3LQ9NVN8 582 aaKnown RBP20.65■□□□□ 0.9
APTR-201ENST00000398043 CYP4F22Q6NT55 531 aa20.64■□□□□ 0.89
APTR-201ENST00000398043 CAPNS2Q96L46 248 aa20.64■□□□□ 0.89
APTR-201ENST00000398043 DENND2AQ9ULE3 1009 aa20.64■□□□□ 0.89
APTR-201ENST00000398043 SPDYE2Q495Y8 402 aa20.63■□□□□ 0.89
APTR-201ENST00000398043 C2orf69Q8N8R5 385 aa20.63■□□□□ 0.89
APTR-201ENST00000398043 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.63■□□□□ 0.89
APTR-201ENST00000398043 YTHDC1Q96MU7 727 aaKnown RBP20.63■□□□□ 0.89
APTR-201ENST00000398043 CLRN2A0PK11 232 aa20.62■□□□□ 0.89
APTR-201ENST00000398043 PRDX5P30044 214 aa20.62■□□□□ 0.89
APTR-201ENST00000398043 RBM5P52756 815 aaKnown RBP eCLIP20.62■□□□□ 0.89
APTR-201ENST00000398043 HUNKP57058 714 aa20.62■□□□□ 0.89
APTR-201ENST00000398043 TNNI3KQ59H18 835 aa20.62■□□□□ 0.89
APTR-201ENST00000398043 HHIPL2Q6UWX4 724 aa20.62■□□□□ 0.89
APTR-201ENST00000398043 RPAP2Q8IXW5 612 aaPredicted RBP20.62■□□□□ 0.89
APTR-201ENST00000398043 ZDHHC15Q96MV8 337 aa20.62■□□□□ 0.89
APTR-201ENST00000398043 DEFB129Q9H1M3 183 aa20.62■□□□□ 0.89
APTR-201ENST00000398043 TDRD3Q9H7E2 651 aaKnown RBP20.62■□□□□ 0.89
APTR-201ENST00000398043 ZNF70Q9UC06 446 aaPredicted RBP20.62■□□□□ 0.89
APTR-201ENST00000398043 FPGT-TNNI3KV9GXZ4 949 aa20.62■□□□□ 0.89
APTR-201ENST00000398043 SSC5DA1L4H1 1573 aa20.62■□□□□ 0.89
APTR-201ENST00000398043 LAMB1P07942 1786 aa20.62■□□□□ 0.89
APTR-201ENST00000398043 OTOFQ9HC10 1997 aa20.61■□□□□ 0.89
APTR-201ENST00000398043 MAST3O60307 1309 aa20.61■□□□□ 0.89
APTR-201ENST00000398043 MYO1BO43795 1136 aa20.61■□□□□ 0.89
APTR-201ENST00000398043 ARID4AP29374 1257 aaPredicted RBP20.61■□□□□ 0.89
APTR-201ENST00000398043 ECE1P42892 770 aa20.61■□□□□ 0.89
APTR-201ENST00000398043 FKBP1BP68106 108 aa20.61■□□□□ 0.89
APTR-201ENST00000398043 APOBEC3HQ6NTF7 200 aaKnown RBP20.61■□□□□ 0.89
APTR-201ENST00000398043 TEKT1Q969V4 418 aa20.61■□□□□ 0.89
APTR-201ENST00000398043 NEUROD6Q96NK8 337 aa20.61■□□□□ 0.89
APTR-201ENST00000398043 PPP2R3BQ9Y5P8 575 aa20.61■□□□□ 0.89
APTR-201ENST00000398043 FAM155AB1AL88 458 aaPredicted RBP20.6■□□□□ 0.89
APTR-201ENST00000398043 AK9Q5TCS8 1911 aa20.6■□□□□ 0.89
APTR-201ENST00000398043 HSPA1AP0DMV8 641 aaKnown RBP20.59■□□□□ 0.89
APTR-201ENST00000398043 HSPA1BP0DMV9 641 aaKnown RBP20.59■□□□□ 0.89
APTR-201ENST00000398043 MOB2Q70IA6 237 aa20.59■□□□□ 0.89
APTR-201ENST00000398043 CHMP4BQ9H444 224 aaKnown RBP20.59■□□□□ 0.89
APTR-201ENST00000398043 WBP1LQ9NX94 342 aa20.59■□□□□ 0.89
APTR-201ENST00000398043 HMG20BQ9P0W2 317 aa20.59■□□□□ 0.89
APTR-201ENST00000398043 EXOC6BQ9Y2D4 811 aa20.59■□□□□ 0.89
APTR-201ENST00000398043 OS9Q13438 667 aaPredicted RBP20.58■□□□□ 0.89
APTR-201ENST00000398043 RGMBQ6NW40 437 aa20.58■□□□□ 0.89
APTR-201ENST00000398043 DBNDD2Q9BQY9 259 aa20.58■□□□□ 0.89
APTR-201ENST00000398043 AOC2O75106 756 aa20.57■□□□□ 0.88
APTR-201ENST00000398043 LDHBP07195 334 aaKnown RBP20.57■□□□□ 0.88
APTR-201ENST00000398043 MAP2K2P36507 400 aa20.57■□□□□ 0.88
APTR-201ENST00000398043 MCAMP43121 646 aa20.57■□□□□ 0.88
APTR-201ENST00000398043 DIXDC1Q155Q3 683 aa20.57■□□□□ 0.88
APTR-201ENST00000398043 PI16Q6UXB8 463 aa20.57■□□□□ 0.88
APTR-201ENST00000398043 PAXIP1Q6ZW49 1069 aaPredicted RBP20.57■□□□□ 0.88
APTR-201ENST00000398043 EAF2Q96CJ1 260 aaPredicted RBP20.57■□□□□ 0.88
APTR-201ENST00000398043 TEPSINQ96N21 525 aa20.57■□□□□ 0.88
APTR-201ENST00000398043 CDK5RAP2Q96SN8 1893 aa20.57■□□□□ 0.88
APTR-201ENST00000398043 VEZTQ9HBM0 779 aa20.57■□□□□ 0.88
APTR-201ENST00000398043 DBNLQ9UJU6 430 aaKnown RBP20.57■□□□□ 0.88
APTR-201ENST00000398043 DAGLAQ9Y4D2 1042 aa20.57■□□□□ 0.88
APTR-201ENST00000398043 DOCK2Q92608 1830 aa20.57■□□□□ 0.88
APTR-201ENST00000398043 MAST2Q6P0Q8 1798 aa20.57■□□□□ 0.88
APTR-201ENST00000398043 RRP1P56182 461 aaKnown RBP20.56■□□□□ 0.88
APTR-201ENST00000398043 RASA3Q14644 834 aa20.56■□□□□ 0.88
APTR-201ENST00000398043 ZGPATQ8N5A5 531 aaKnown RBP20.56■□□□□ 0.88
APTR-201ENST00000398043 SPATA5Q8NB90 893 aa20.56■□□□□ 0.88
APTR-201ENST00000398043 ZNF384Q8TF68 577 aa20.56■□□□□ 0.88
APTR-201ENST00000398043 ZNF512BQ96KM6 892 aaPredicted RBP20.56■□□□□ 0.88
APTR-201ENST00000398043 ZIC5Q96T25 663 aa20.56■□□□□ 0.88
APTR-201ENST00000398043 TLR7Q9NYK1 1049 aaKnown RBP20.56■□□□□ 0.88
APTR-201ENST00000398043 SLC10A3P09131 477 aa20.55■□□□□ 0.88
APTR-201ENST00000398043 UQCRFS1P1P0C7P4 283 aa20.55■□□□□ 0.88
APTR-201ENST00000398043 TNFAIP1Q13829 316 aa20.55■□□□□ 0.88
APTR-201ENST00000398043 MAP3K11Q16584 847 aa20.55■□□□□ 0.88
APTR-201ENST00000398043 GORABQ5T7V8 394 aa20.55■□□□□ 0.88
APTR-201ENST00000398043 NBPF12Q5TAG4 269 aaPredicted RBP20.55■□□□□ 0.88
APTR-201ENST00000398043 ERC1Q8IUD2 1116 aa20.55■□□□□ 0.88
APTR-201ENST00000398043 GAKO14976 1311 aa20.54■□□□□ 0.88
APTR-201ENST00000398043 UBE2Q2LH0YL09 131 aa20.54■□□□□ 0.88
APTR-201ENST00000398043 NF2P35240 595 aa20.54■□□□□ 0.88
APTR-201ENST00000398043 GRM1Q13255 1194 aa20.54■□□□□ 0.88
APTR-201ENST00000398043 HSP90AB4PQ58FF6 505 aa20.54■□□□□ 0.88
APTR-201ENST00000398043 LDLRAD1Q5T700 205 aa20.54■□□□□ 0.88
APTR-201ENST00000398043 FKBP1CQ5VVH2 108 aa20.54■□□□□ 0.88
APTR-201ENST00000398043 CDAN1Q8IWY9 1227 aa20.54■□□□□ 0.88
APTR-201ENST00000398043 RHPN1Q8TCX5 695 aa20.54■□□□□ 0.88
APTR-201ENST00000398043 FAM163AQ96GL9 167 aaPredicted RBP20.54■□□□□ 0.88
APTR-201ENST00000398043 TCP10L2B9ZVM9 353 aa20.53■□□□□ 0.88
APTR-201ENST00000398043 HMMRO75330 724 aa20.53■□□□□ 0.88
APTR-201ENST00000398043 ZNF157P51786 506 aaPredicted RBP20.53■□□□□ 0.88
APTR-201ENST00000398043 CACNB3P54284 484 aa20.53■□□□□ 0.88
APTR-201ENST00000398043 MAP2K1Q02750 393 aaPredicted RBP20.53■□□□□ 0.88
APTR-201ENST00000398043 NOGQ13253 232 aa20.53■□□□□ 0.88
APTR-201ENST00000398043 RASAL3Q86YV0 1011 aa20.53■□□□□ 0.88
APTR-201ENST00000398043 CCDC102AQ96A19 550 aa20.53■□□□□ 0.88
APTR-201ENST00000398043 CCDC8Q9H0W5 538 aaPredicted RBP20.53■□□□□ 0.88
APTR-201ENST00000398043 ABCF2Q9UG63 623 aa20.53■□□□□ 0.88
APTR-201ENST00000398043 FZD1Q9UP38 647 aa20.53■□□□□ 0.88
APTR-201ENST00000398043 FOCADQ5VW36 1801 aa20.53■□□□□ 0.88
APTR-201ENST00000398043 FOXN1O15353 648 aa20.52■□□□□ 0.88
APTR-201ENST00000398043 CDC42EP5Q6NZY7 148 aa20.52■□□□□ 0.88
APTR-201ENST00000398043 TBC1D9Q6ZT07 1266 aa20.52■□□□□ 0.88
APTR-201ENST00000398043 FAM83AQ86UY5 434 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms