RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 GMLQ99445 158 aa28.59■■■□□ 2.17
TSPAN4-203ENST00000397397 MYH7P12883 1935 aa28.58■■■□□ 2.17
TSPAN4-203ENST00000397397 DDNO94850 711 aaPredicted RBP28.58■■■□□ 2.17
TSPAN4-203ENST00000397397 RPS12P25398 132 aaKnown RBP28.58■■■□□ 2.17
TSPAN4-203ENST00000397397 GMPSP49915 693 aaPredicted RBP28.58■■■□□ 2.17
TSPAN4-203ENST00000397397 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.58■■■□□ 2.17
TSPAN4-203ENST00000397397 TTF2Q9UNY4 1162 aaKnown RBP28.58■■■□□ 2.17
TSPAN4-203ENST00000397397 KIF3CO14782 793 aa28.57■■■□□ 2.16
TSPAN4-203ENST00000397397 NMRK2Q9NPI5 230 aa28.57■■■□□ 2.16
TSPAN4-203ENST00000397397 MAST2Q6P0Q8 1798 aa28.57■■■□□ 2.16
TSPAN4-203ENST00000397397 MECOMQ03112 1051 aa28.56■■■□□ 2.16
TSPAN4-203ENST00000397397 SLC9C2Q5TAH2 1124 aa28.55■■■□□ 2.16
TSPAN4-203ENST00000397397 ZSCAN25Q6NSZ9 544 aa28.55■■■□□ 2.16
TSPAN4-203ENST00000397397 MAGEB6Q8N7X4 407 aa28.55■■■□□ 2.16
TSPAN4-203ENST00000397397 NSUN4Q96CB9 384 aaKnown RBP28.55■■■□□ 2.16
TSPAN4-203ENST00000397397 MAST3O60307 1309 aa28.55■■■□□ 2.16
TSPAN4-203ENST00000397397 GLTPD2A6NH11 291 aa28.54■■■□□ 2.16
TSPAN4-203ENST00000397397 IGSF3O75054 1194 aa28.54■■■□□ 2.16
TSPAN4-203ENST00000397397 SCNN1DP51172 638 aa28.54■■■□□ 2.16
TSPAN4-203ENST00000397397 C1QTNF8P60827 252 aa28.54■■■□□ 2.16
TSPAN4-203ENST00000397397 LRRFIP1Q32MZ4 808 aaKnown RBP28.54■■■□□ 2.16
TSPAN4-203ENST00000397397 NAA16Q6N069 864 aaPredicted RBP28.54■■■□□ 2.16
TSPAN4-203ENST00000397397 USP17L8P0C7I0 530 aa28.53■■■□□ 2.16
TSPAN4-203ENST00000397397 PDE6AP16499 860 aa28.53■■■□□ 2.16
TSPAN4-203ENST00000397397 DPF2Q92785 391 aa28.53■■■□□ 2.16
TSPAN4-203ENST00000397397 HDAC9Q9UKV0 1011 aa28.53■■■□□ 2.16
TSPAN4-203ENST00000397397 ADD2P35612 726 aa28.52■■■□□ 2.16
TSPAN4-203ENST00000397397 GSTO1P78417 241 aa28.52■■■□□ 2.16
TSPAN4-203ENST00000397397 OGFOD1Q8N543 542 aa28.52■■■□□ 2.16
TSPAN4-203ENST00000397397 ZNF384Q8TF68 577 aa28.52■■■□□ 2.16
TSPAN4-203ENST00000397397 MYH2Q9UKX2 1941 aa28.52■■■□□ 2.16
TSPAN4-203ENST00000397397 RFX7Q2KHR2 1363 aa28.52■■■□□ 2.16
TSPAN4-203ENST00000397397 RNF113AO15541 343 aaKnown RBP28.52■■■□□ 2.16
TSPAN4-203ENST00000397397 ZFYP08048 801 aaPredicted RBP28.52■■■□□ 2.16
TSPAN4-203ENST00000397397 CYP7A1P22680 504 aa28.52■■■□□ 2.16
TSPAN4-203ENST00000397397 DIXDC1Q155Q3 683 aa28.52■■■□□ 2.16
TSPAN4-203ENST00000397397 SLF2Q8IX21 1173 aa28.52■■■□□ 2.16
TSPAN4-203ENST00000397397 CNOT7Q9UIV1 285 aaKnown RBP28.52■■■□□ 2.16
TSPAN4-203ENST00000397397 ZNF532Q9HCE3 1301 aa28.51■■■□□ 2.15
TSPAN4-203ENST00000397397 CHGBP05060 677 aa28.51■■■□□ 2.15
TSPAN4-203ENST00000397397 SLFNL1Q499Z3 407 aa28.51■■■□□ 2.15
TSPAN4-203ENST00000397397 MICALL2Q8IY33 904 aa28.51■■■□□ 2.15
TSPAN4-203ENST00000397397 SHTN1A0MZ66 631 aa28.5■■■□□ 2.15
TSPAN4-203ENST00000397397 LDHCP07864 332 aa28.5■■■□□ 2.15
TSPAN4-203ENST00000397397 TMED8Q6PL24 325 aaPredicted RBP28.5■■■□□ 2.15
TSPAN4-203ENST00000397397 TICAM2Q86XR7 235 aa28.5■■■□□ 2.15
TSPAN4-203ENST00000397397 TCRBV5S4A2TA0A5A2 114 aa28.49■■■□□ 2.15
TSPAN4-203ENST00000397397 CRKP46108 304 aa28.49■■■□□ 2.15
TSPAN4-203ENST00000397397 HDLBPQ00341 1268 aaKnown RBP28.49■■■□□ 2.15
TSPAN4-203ENST00000397397 UBE3CQ15386 1083 aa28.49■■■□□ 2.15
TSPAN4-203ENST00000397397 TEKT1Q969V4 418 aa28.49■■■□□ 2.15
TSPAN4-203ENST00000397397 MRIQ9BWK5 157 aa28.49■■■□□ 2.15
TSPAN4-203ENST00000397397 RRAGCQ9HB90 399 aa28.49■■■□□ 2.15
TSPAN4-203ENST00000397397 GPRC5DQ9NZD1 345 aa28.49■■■□□ 2.15
TSPAN4-203ENST00000397397 ADAMTSL1Q8N6G6 1762 aa28.48■■■□□ 2.15
TSPAN4-203ENST00000397397 HIP1O00291 1037 aa28.48■■■□□ 2.15
TSPAN4-203ENST00000397397 LMOD1P29536 600 aaPredicted RBP28.48■■■□□ 2.15
TSPAN4-203ENST00000397397 MMP14P50281 582 aa28.48■■■□□ 2.15
TSPAN4-203ENST00000397397 RBM5P52756 815 aaKnown RBP eCLIP28.48■■■□□ 2.15
TSPAN4-203ENST00000397397 ZNF280AP59817 542 aaPredicted RBP28.48■■■□□ 2.15
TSPAN4-203ENST00000397397 DIAPH3Q9NSV4 1193 aa28.48■■■□□ 2.15
TSPAN4-203ENST00000397397 SERPINA10Q9UK55 444 aa28.48■■■□□ 2.15
TSPAN4-203ENST00000397397 MROH7-TTC4A0A0A0MT08 1334 aa28.47■■■□□ 2.15
TSPAN4-203ENST00000397397 H7C1D1 291 aa28.47■■■□□ 2.15
TSPAN4-203ENST00000397397 HHIPL2Q6UWX4 724 aa28.47■■■□□ 2.15
TSPAN4-203ENST00000397397 L3MBTL3Q96JM7 780 aaPredicted RBP28.47■■■□□ 2.15
TSPAN4-203ENST00000397397 CFAP100Q494V2 611 aa28.46■■■□□ 2.15
TSPAN4-203ENST00000397397 ADGRA1Q86SQ6 560 aa28.46■■■□□ 2.15
TSPAN4-203ENST00000397397 APPBP2Q92624 585 aa28.46■■■□□ 2.15
TSPAN4-203ENST00000397397 FAM163AQ96GL9 167 aaPredicted RBP28.46■■■□□ 2.15
TSPAN4-203ENST00000397397 DAGLAQ9Y4D2 1042 aa28.46■■■□□ 2.15
TSPAN4-203ENST00000397397 GAKO14976 1311 aa28.46■■■□□ 2.15
TSPAN4-203ENST00000397397 CDC45O75419 566 aa28.45■■■□□ 2.15
TSPAN4-203ENST00000397397 CHMLP26374 656 aa28.45■■■□□ 2.15
TSPAN4-203ENST00000397397 NMIQ13287 307 aaPredicted RBP28.45■■■□□ 2.15
TSPAN4-203ENST00000397397 ZMYM1Q5SVZ6 1142 aa28.45■■■□□ 2.15
TSPAN4-203ENST00000397397 MYOZ2Q9NPC6 264 aa28.45■■■□□ 2.15
TSPAN4-203ENST00000397397 EPS15P42566 896 aa28.44■■■□□ 2.14
TSPAN4-203ENST00000397397 WDR90Q96KV7 1748 aa28.44■■■□□ 2.14
TSPAN4-203ENST00000397397 ZDHHC15Q96MV8 337 aa28.44■■■□□ 2.14
TSPAN4-203ENST00000397397 NOL10Q9BSC4 688 aaKnown RBP28.44■■■□□ 2.14
TSPAN4-203ENST00000397397 DLGAP5Q15398 846 aa28.43■■■□□ 2.14
TSPAN4-203ENST00000397397 RBM26Q5T8P6 1007 aaKnown RBP28.43■■■□□ 2.14
TSPAN4-203ENST00000397397 MIGA1Q8NAN2 632 aa28.43■■■□□ 2.14
TSPAN4-203ENST00000397397 FAM227BQ96M60 508 aa28.43■■■□□ 2.14
TSPAN4-203ENST00000397397 PCDHAC2Q9Y5I4 1007 aa28.43■■■□□ 2.14
TSPAN4-203ENST00000397397 BTDP43251 543 aa28.43■■■□□ 2.14
TSPAN4-203ENST00000397397 TBC1D10BQ4KMP7 808 aaPredicted RBP28.43■■■□□ 2.14
TSPAN4-203ENST00000397397 CWC27Q6UX04 472 aaKnown RBP28.43■■■□□ 2.14
TSPAN4-203ENST00000397397 SAMD7Q7Z3H4 446 aa28.43■■■□□ 2.14
TSPAN4-203ENST00000397397 OSBP2Q969R2 916 aa28.43■■■□□ 2.14
TSPAN4-203ENST00000397397 PUS7LQ9H0K6 701 aaKnown RBP28.43■■■□□ 2.14
TSPAN4-203ENST00000397397 HACL1Q9UJ83 578 aa28.43■■■□□ 2.14
TSPAN4-203ENST00000397397 GPR75-ASB3A0A0A6YYF3 556 aa28.42■■■□□ 2.14
TSPAN4-203ENST00000397397 A0A0D9SFI3 127 aa28.42■■■□□ 2.14
TSPAN4-203ENST00000397397 POTECB2RU33 542 aa28.42■■■□□ 2.14
TSPAN4-203ENST00000397397 MTMR14Q8NCE2 650 aa28.42■■■□□ 2.14
TSPAN4-203ENST00000397397 SEC62Q99442 399 aaKnown RBP28.42■■■□□ 2.14
TSPAN4-203ENST00000397397 HELLSQ9NRZ9 838 aa28.42■■■□□ 2.14
TSPAN4-203ENST00000397397 AATFQ9NY61 560 aaKnown RBP eCLIP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms