RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 SPDL1Q96EA4 605 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 UTP14CQ5TAP6 766 aaKnown RBP13.83□□□□□ -0.2
SMU1-201ENST00000397149 VPS8Q8N3P4 1428 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 NBPF6Q5VWK0 638 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 NBPF5PQ86XG9 351 aaPredicted RBP13.83□□□□□ -0.2
SMU1-201ENST00000397149 VSIG1Q86XK7 387 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 NBPF4Q96M43 638 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 ZMAT2Q96NC0 199 aaKnown RBP13.83□□□□□ -0.2
SMU1-201ENST00000397149 AKNAQ7Z591 1439 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 SLC12A2P55011 1212 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 PLEKHA4Q9H4M7 779 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 GJA3Q9Y6H8 435 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 SAT1P21673 171 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 KCNA4P22459 653 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 RPAP2Q8IXW5 612 aaPredicted RBP13.82□□□□□ -0.2
SMU1-201ENST00000397149 KRT83P78385 493 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 TRPC3Q13507 836 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 MIER3Q7Z3K6 550 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 TNPO1Q92973 898 aaKnown RBP13.82□□□□□ -0.2
SMU1-201ENST00000397149 BLVRAP53004 296 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 PHEXP78562 749 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 ITKQ08881 620 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 RTN1Q16799 776 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 CCDC186Q7Z3E2 898 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 HVCN1Q96D96 273 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 USH1CQ9Y6N9 552 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 KIF22Q14807 665 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 HHATQ5VTY9 493 aa13.82□□□□□ -0.2
SMU1-201ENST00000397149 PNMA8AQ86V59 439 aaPredicted RBP13.82□□□□□ -0.2
SMU1-201ENST00000397149 B4DLN1 442 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 OPHN1O60890 802 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 POLD1P28340 1107 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 MRPL12P52815 198 aaKnown RBP13.81□□□□□ -0.2
SMU1-201ENST00000397149 RILPL1Q5EBL4 403 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 TRIM68Q6AZZ1 485 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 ZBTB43O43298 467 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 BAG2O95816 211 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 KRT19P08727 400 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 ZBTB41Q5SVQ8 909 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 KRBA2Q6ZNG9 492 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 ABCF3Q9NUQ8 709 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 SLC9A5Q14940 896 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 FAM200AQ8TCP9 573 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMU1-201ENST00000397149 SETSIPP0DME0 302 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 GSTO1P78417 241 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 KRT79Q5XKE5 535 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 ZNF365Q70YC5 407 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 RIOK1Q9BRS2 568 aaKnown RBP13.81□□□□□ -0.2
SMU1-201ENST00000397149 PRKG1Q13976 671 aa13.81□□□□□ -0.2
SMU1-201ENST00000397149 KAT6BQ8WYB5 2073 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 ARHGAP42A6NI28 874 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 DDX39AO00148 427 aaKnown RBP13.8□□□□□ -0.2
SMU1-201ENST00000397149 TNNC1P63316 161 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 ATP2A3Q93084 1043 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 ACSBG1Q96GR2 724 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 DNAJC25Q9H1X3 360 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 SYF2O95926 243 aaKnown RBP13.8□□□□□ -0.2
SMU1-201ENST00000397149 JADE1Q6IE81 842 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 SRGAP1Q7Z6B7 1085 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMU1-201ENST00000397149 ACBD5Q5T8D3 534 aaPredicted RBP13.8□□□□□ -0.2
SMU1-201ENST00000397149 CHST3Q7LGC8 479 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 RNF169Q8NCN4 708 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 BEGAINQ9BUH8 593 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 MAP3K2Q9Y2U5 619 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 I3L4J1 428 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 GSTA1P08263 222 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 GSTA2P09210 222 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 ATP5DP30049 168 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 HNRNPCL2B2RXH8 293 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 HNRNPCL1O60812 293 aaKnown RBP13.8□□□□□ -0.2
SMU1-201ENST00000397149 TNFAIP3P21580 790 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 CEP128Q6ZU80 1094 aa13.8□□□□□ -0.2
SMU1-201ENST00000397149 OLA1Q9NTK5 396 aaKnown RBP13.8□□□□□ -0.2
SMU1-201ENST00000397149 TPX2Q9ULW0 747 aaKnown RBP13.8□□□□□ -0.2
SMU1-201ENST00000397149 A0A1B0GUA9 196 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 MCM5P33992 734 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 TSNAXIP1Q2TAA8 658 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMU1-201ENST00000397149 UBE3BQ7Z3V4 1068 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 GABPB2Q8TAK5 448 aaPredicted RBP13.79□□□□□ -0.2
SMU1-201ENST00000397149 CNPY2Q9Y2B0 182 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 GOLGA6BA6NDN3 693 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 ZYXQ15942 572 aaKnown RBP13.79□□□□□ -0.2
SMU1-201ENST00000397149 CCDC26Q8TAB7 109 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 VCX3AQ9NNX9 186 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 SYT10Q6XYQ8 523 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 BRF1Q92994 677 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 CSRNP2Q9H175 543 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 BAG5Q9UL15 447 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 OATP04181 439 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 KIFAP3Q92845 792 aa13.79□□□□□ -0.2
SMU1-201ENST00000397149 EXOC5O00471 708 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 RAB3GAP1Q15042 981 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 ASIC3Q9UHC3 531 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 SLC12A1Q13621 1099 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 SCYL1Q96KG9 808 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 KRT15P19012 456 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 PHLDB2Q86SQ0 1253 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms