RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 DUSP27Q5VZP5 1158 aa17.74■□□□□ 0.43
VCPKMT-201ENST00000395859 PCGF6Q9BYE7 350 aa17.74■□□□□ 0.43
VCPKMT-201ENST00000395859 ANKRD2Q9GZV1 360 aa17.74■□□□□ 0.43
VCPKMT-201ENST00000395859 TRIM35Q9UPQ4 493 aa17.74■□□□□ 0.43
VCPKMT-201ENST00000395859 SNCAIPQ9Y6H5 919 aa17.74■□□□□ 0.43
VCPKMT-201ENST00000395859 F8W031 263 aaPredicted RBP17.73■□□□□ 0.43
VCPKMT-201ENST00000395859 TNFAIP1Q13829 316 aa17.73■□□□□ 0.43
VCPKMT-201ENST00000395859 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.73■□□□□ 0.43
VCPKMT-201ENST00000395859 UNC93B1Q9H1C4 597 aa17.73■□□□□ 0.43
VCPKMT-201ENST00000395859 ZNF70Q9UC06 446 aaPredicted RBP17.73■□□□□ 0.43
VCPKMT-201ENST00000395859 IRF6O14896 467 aa17.72■□□□□ 0.43
VCPKMT-201ENST00000395859 IGKV5-2P06315 115 aa17.72■□□□□ 0.43
VCPKMT-201ENST00000395859 RAET1EQ8TD07 263 aa17.72■□□□□ 0.43
VCPKMT-201ENST00000395859 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
VCPKMT-201ENST00000395859 A0A1B0GUL6 1792 aa17.71■□□□□ 0.43
VCPKMT-201ENST00000395859 CDH23Q9H251 3354 aa17.71■□□□□ 0.43
VCPKMT-201ENST00000395859 SNAP23O00161 211 aa17.71■□□□□ 0.43
VCPKMT-201ENST00000395859 WDHD1O75717 1129 aaPredicted RBP17.71■□□□□ 0.43
VCPKMT-201ENST00000395859 CAPN2P17655 700 aa17.71■□□□□ 0.43
VCPKMT-201ENST00000395859 HOXD10P28358 340 aa17.71■□□□□ 0.43
VCPKMT-201ENST00000395859 ERO1BQ86YB8 467 aa17.71■□□□□ 0.43
VCPKMT-201ENST00000395859 CPA4Q9UI42 421 aa17.71■□□□□ 0.43
VCPKMT-201ENST00000395859 UBXN2AP68543 259 aa17.7■□□□□ 0.42
VCPKMT-201ENST00000395859 SNAPC2Q13487 334 aa17.7■□□□□ 0.42
VCPKMT-201ENST00000395859 TMEM39BQ9GZU3 492 aa17.7■□□□□ 0.42
VCPKMT-201ENST00000395859 CRISPLD2Q9H0B8 497 aa17.7■□□□□ 0.42
VCPKMT-201ENST00000395859 CSADQ9Y600 493 aa17.7■□□□□ 0.42
VCPKMT-201ENST00000395859 IGHMBP2P38935 993 aaKnown RBP17.69■□□□□ 0.42
VCPKMT-201ENST00000395859 BCAMP50895 628 aa17.69■□□□□ 0.42
VCPKMT-201ENST00000395859 PRKCZQ05513 592 aa17.69■□□□□ 0.42
VCPKMT-201ENST00000395859 CHRNDQ07001 517 aa17.69■□□□□ 0.42
VCPKMT-201ENST00000395859 PPIL2Q13356 520 aa17.69■□□□□ 0.42
VCPKMT-201ENST00000395859 MOGSQ13724 837 aa17.69■□□□□ 0.42
VCPKMT-201ENST00000395859 SLAIN1Q8ND83 568 aa17.69■□□□□ 0.42
VCPKMT-201ENST00000395859 PLA2G12BQ9BX93 195 aa17.69■□□□□ 0.42
VCPKMT-201ENST00000395859 PAK6Q9NQU5 681 aaPredicted RBP17.69■□□□□ 0.42
VCPKMT-201ENST00000395859 PRDM6Q9NQX0 595 aa17.69■□□□□ 0.42
VCPKMT-201ENST00000395859 MGAMO43451 1857 aa17.69■□□□□ 0.42
VCPKMT-201ENST00000395859 ECM2O94769 699 aaPredicted RBP17.68■□□□□ 0.42
VCPKMT-201ENST00000395859 BCRP11274 1271 aa17.68■□□□□ 0.42
VCPKMT-201ENST00000395859 ANKRD23Q86SG2 305 aa17.68■□□□□ 0.42
VCPKMT-201ENST00000395859 TDRD3Q9H7E2 651 aaKnown RBP17.68■□□□□ 0.42
VCPKMT-201ENST00000395859 SERPINA10Q9UK55 444 aa17.68■□□□□ 0.42
VCPKMT-201ENST00000395859 H7C1W4 665 aa17.67■□□□□ 0.42
VCPKMT-201ENST00000395859 FMNL1O95466 1100 aaPredicted RBP17.67■□□□□ 0.42
VCPKMT-201ENST00000395859 CSF1RP07333 972 aa17.67■□□□□ 0.42
VCPKMT-201ENST00000395859 ITGA6P23229 1130 aa17.67■□□□□ 0.42
VCPKMT-201ENST00000395859 GABRQQ9UN88 632 aa17.67■□□□□ 0.42
VCPKMT-201ENST00000395859 LAS1LQ9Y4W2 734 aaKnown RBP17.67■□□□□ 0.42
VCPKMT-201ENST00000395859 FAM205AQ6ZU69 1335 aa17.67■□□□□ 0.42
VCPKMT-201ENST00000395859 DNAH12Q6ZR08 3092 aa17.66■□□□□ 0.42
VCPKMT-201ENST00000395859 ZNF853P0CG23 659 aa17.66■□□□□ 0.42
VCPKMT-201ENST00000395859 DZIP1LQ8IYY4 767 aaKnown RBP17.66■□□□□ 0.42
VCPKMT-201ENST00000395859 TDHQ8IZJ6 230 aa17.66■□□□□ 0.42
VCPKMT-201ENST00000395859 ZKSCAN4Q969J2 545 aaPredicted RBP17.66■□□□□ 0.42
VCPKMT-201ENST00000395859 PAWRQ96IZ0 340 aaKnown RBP17.66■□□□□ 0.42
VCPKMT-201ENST00000395859 GUCD1Q96NT3 240 aa17.66■□□□□ 0.42
VCPKMT-201ENST00000395859 MBIPQ9NS73 344 aa17.66■□□□□ 0.42
VCPKMT-201ENST00000395859 JAG2Q9Y219 1238 aa17.66■□□□□ 0.42
VCPKMT-201ENST00000395859 COL2A1P02458 1487 aaPredicted RBP17.65■□□□□ 0.42
VCPKMT-201ENST00000395859 RBM5P52756 815 aaKnown RBP eCLIP17.65■□□□□ 0.42
VCPKMT-201ENST00000395859 CASP7P55210 303 aa17.65■□□□□ 0.42
VCPKMT-201ENST00000395859 KCNH4Q9UQ05 1017 aa17.65■□□□□ 0.42
VCPKMT-201ENST00000395859 MAP3K2Q9Y2U5 619 aa17.65■□□□□ 0.42
VCPKMT-201ENST00000395859 TCP10L2B9ZVM9 353 aa17.64■□□□□ 0.41
VCPKMT-201ENST00000395859 POTEB2H3BUK9 544 aa17.64■□□□□ 0.41
VCPKMT-201ENST00000395859 PDHXO00330 501 aa17.64■□□□□ 0.41
VCPKMT-201ENST00000395859 TAF5LO75529 589 aa17.64■□□□□ 0.41
VCPKMT-201ENST00000395859 PPATQ06203 517 aa17.64■□□□□ 0.41
VCPKMT-201ENST00000395859 PXYLP1Q8TE99 480 aa17.64■□□□□ 0.41
VCPKMT-201ENST00000395859 DIS3LQ8TF46 1054 aaKnown RBP17.64■□□□□ 0.41
VCPKMT-201ENST00000395859 DEFB118Q96PH6 123 aa17.64■□□□□ 0.41
VCPKMT-201ENST00000395859 MPHOSPH8Q99549 860 aa17.64■□□□□ 0.41
VCPKMT-201ENST00000395859 BIN2Q9UBW5 565 aaPredicted RBP17.64■□□□□ 0.41
VCPKMT-201ENST00000395859 NEURL1BA8MQ27 555 aa17.63■□□□□ 0.41
VCPKMT-201ENST00000395859 INHAP05111 366 aa17.63■□□□□ 0.41
VCPKMT-201ENST00000395859 MAGEA10P43363 369 aaPredicted RBP17.63■□□□□ 0.41
VCPKMT-201ENST00000395859 KCNJ4P48050 445 aa17.63■□□□□ 0.41
VCPKMT-201ENST00000395859 FAM109BQ6ICB4 259 aaPredicted RBP17.63■□□□□ 0.41
VCPKMT-201ENST00000395859 ZNF804AQ7Z570 1209 aa17.63■□□□□ 0.41
VCPKMT-201ENST00000395859 WRNIP1Q96S55 665 aa17.63■□□□□ 0.41
VCPKMT-201ENST00000395859 ZMYND8Q9ULU4 1186 aaPredicted RBP17.63■□□□□ 0.41
VCPKMT-201ENST00000395859 RPTORQ8N122 1335 aa17.63■□□□□ 0.41
VCPKMT-201ENST00000395859 ADCY3O60266 1144 aa17.62■□□□□ 0.41
VCPKMT-201ENST00000395859 TFRCP02786 760 aaKnown RBP17.62■□□□□ 0.41
VCPKMT-201ENST00000395859 IRF5Q13568 498 aa17.62■□□□□ 0.41
VCPKMT-201ENST00000395859 NEUROD2Q15784 382 aa17.62■□□□□ 0.41
VCPKMT-201ENST00000395859 CWF19L2Q2TBE0 894 aaKnown RBP17.62■□□□□ 0.41
VCPKMT-201ENST00000395859 KSR2Q6VAB6 950 aa17.62■□□□□ 0.41
VCPKMT-201ENST00000395859 NECAB2Q7Z6G3 386 aa17.62■□□□□ 0.41
VCPKMT-201ENST00000395859 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.62■□□□□ 0.41
VCPKMT-201ENST00000395859 TTF2Q9UNY4 1162 aaKnown RBP17.62■□□□□ 0.41
VCPKMT-201ENST00000395859 PI4KAP2A4QPH2 592 aa17.61■□□□□ 0.41
VCPKMT-201ENST00000395859 DDX58O95786 925 aaKnown RBP17.61■□□□□ 0.41
VCPKMT-201ENST00000395859 ELNP15502 786 aa17.61■□□□□ 0.41
VCPKMT-201ENST00000395859 TNNI2P48788 182 aa17.61■□□□□ 0.41
VCPKMT-201ENST00000395859 FLT3LGP49771 235 aa17.61■□□□□ 0.41
VCPKMT-201ENST00000395859 FCGRTP55899 365 aa17.61■□□□□ 0.41
VCPKMT-201ENST00000395859 GPAT2Q6NUI2 795 aa17.61■□□□□ 0.41
VCPKMT-201ENST00000395859 UBE3BQ7Z3V4 1068 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms