RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
BBS4-202ENST00000395205 NSUN4Q96CB9 384 aaKnown RBP11.81□□□□□ -0.52
BBS4-202ENST00000395205 ARMT1Q9H993 441 aa11.81□□□□□ -0.52
BBS4-202ENST00000395205 DBNDD1Q9H9R9 158 aa11.81□□□□□ -0.52
BBS4-202ENST00000395205 MAGEB6P1A0A0J9YX57 407 aa11.81□□□□□ -0.52
BBS4-202ENST00000395205 SLC4A3P48751 1232 aa11.81□□□□□ -0.52
BBS4-202ENST00000395205 MFSD14BQ5SR56 506 aa11.81□□□□□ -0.52
BBS4-202ENST00000395205 TTLL5Q6EMB2 1281 aa11.81□□□□□ -0.52
BBS4-202ENST00000395205 TBC1D22AQ8WUA7 517 aa11.81□□□□□ -0.52
BBS4-202ENST00000395205 STRBPQ96SI9 672 aaKnown RBP11.81□□□□□ -0.52
BBS4-202ENST00000395205 A0A1B0GUL6 1792 aa11.8□□□□□ -0.52
BBS4-202ENST00000395205 PPIP5K2O43314 1243 aa11.8□□□□□ -0.52
BBS4-202ENST00000395205 PODNQ7Z5L7 613 aa11.8□□□□□ -0.52
BBS4-202ENST00000395205 CTNNA3Q9UI47 895 aa11.8□□□□□ -0.52
BBS4-202ENST00000395205 BCS1LQ9Y276 419 aa11.8□□□□□ -0.52
BBS4-202ENST00000395205 AKAP11Q9UKA4 1901 aa11.8□□□□□ -0.52
BBS4-202ENST00000395205 FAM205AQ6ZU69 1335 aa11.8□□□□□ -0.52
BBS4-202ENST00000395205 GSTO1P78417 241 aa11.8□□□□□ -0.52
BBS4-202ENST00000395205 KIAA2012Q0VF49 1180 aa11.8□□□□□ -0.52
BBS4-202ENST00000395205 ADGRA1Q86SQ6 560 aa11.8□□□□□ -0.52
BBS4-202ENST00000395205 PATL2C9JE40 543 aaKnown RBP11.79□□□□□ -0.52
BBS4-202ENST00000395205 ECE2O60344 883 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 NEK4P51957 841 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 GRIK5Q16478 980 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 HSCBQ8IWL3 235 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 LCORLQ8N3X6 602 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 ZNF384Q8TF68 577 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 KCNB2Q92953 911 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 PSMD1Q99460 953 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 SLC4A4Q9Y6R1 1079 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 SLX4Q8IY92 1834 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 LRRC37AA6NMS7 1700 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 ST18O60284 1047 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 IGSF3O75054 1194 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 FGAP02671 866 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 GNAT2P19087 354 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 CNKSR2Q8WXI2 1034 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 TBC1D2Q9BYX2 928 aa11.79□□□□□ -0.52
BBS4-202ENST00000395205 ZNF277Q9NRM2 450 aaPredicted RBP11.79□□□□□ -0.52
BBS4-202ENST00000395205 LDHCP07864 332 aa11.78□□□□□ -0.52
BBS4-202ENST00000395205 DYNLL1P63167 89 aaKnown RBP11.78□□□□□ -0.52
BBS4-202ENST00000395205 TMED8Q6PL24 325 aaPredicted RBP11.78□□□□□ -0.52
BBS4-202ENST00000395205 NLGN2Q8NFZ4 835 aa11.78□□□□□ -0.52
BBS4-202ENST00000395205 JAKMIP1Q96N16 626 aaKnown RBP11.78□□□□□ -0.52
BBS4-202ENST00000395205 KCNQ5Q9NR82 932 aa11.78□□□□□ -0.52
BBS4-202ENST00000395205 DUOX1Q9NRD9 1551 aa11.78□□□□□ -0.52
BBS4-202ENST00000395205 PRKAB2O43741 272 aa11.78□□□□□ -0.52
BBS4-202ENST00000395205 PSMA5P28066 241 aa11.78□□□□□ -0.52
BBS4-202ENST00000395205 IMMTQ16891 758 aaKnown RBP11.78□□□□□ -0.52
BBS4-202ENST00000395205 LARGE2Q8N3Y3 721 aa11.78□□□□□ -0.52
BBS4-202ENST00000395205 SNX21Q969T3 373 aa11.78□□□□□ -0.52
BBS4-202ENST00000395205 IL17RAQ96F46 866 aa11.78□□□□□ -0.52
BBS4-202ENST00000395205 NOL10Q9BSC4 688 aaKnown RBP11.78□□□□□ -0.52
BBS4-202ENST00000395205 MXD3Q9BW11 206 aa11.78□□□□□ -0.52
BBS4-202ENST00000395205 UPF3BQ9BZI7 483 aaKnown RBP11.78□□□□□ -0.52
BBS4-202ENST00000395205 NACAP1Q9BZK3 213 aa11.78□□□□□ -0.52
BBS4-202ENST00000395205 AATFQ9NY61 560 aaKnown RBP eCLIP11.78□□□□□ -0.52
BBS4-202ENST00000395205 F8W031 263 aaPredicted RBP11.77□□□□□ -0.53
BBS4-202ENST00000395205 FOXP2O15409 715 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 CYP21A2P08686 494 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 CASTP20810 708 aaKnown RBP11.77□□□□□ -0.53
BBS4-202ENST00000395205 KRT32Q14532 448 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 DIXDC1Q155Q3 683 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 ADCK5Q3MIX3 580 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 SLF2Q8IX21 1173 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 IL27Q8NEV9 243 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 USP17L3A6NCW0 530 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 USP17L4A6NCW7 530 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 ZNF213O14771 459 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 TSGA10IPQ3SY00 556 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 USP17L1Q7RTZ2 530 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 IFNL3Q8IZI9 196 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 RIOK1Q9BRS2 568 aaKnown RBP11.77□□□□□ -0.53
BBS4-202ENST00000395205 NAPBQ9H115 298 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 TAF6LQ9Y6J9 622 aa11.77□□□□□ -0.53
BBS4-202ENST00000395205 LTBP1Q14766 1721 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 GSG1L2A8MUP6 293 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 BAG3O95817 575 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 HAND2P61296 217 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 STRIP1Q5VSL9 837 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 VPS33BQ9H267 617 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 SUGT1Q9Y2Z0 365 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 CYP46A1Q9Y6A2 500 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 SNED1Q8TER0 1413 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 CD2BP2O95400 341 aaKnown RBP11.76□□□□□ -0.53
BBS4-202ENST00000395205 TDO2P48775 406 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 ALX1Q15699 326 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 CERS5Q8N5B7 392 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 CRNKL1Q9BZJ0 848 aaKnown RBP11.76□□□□□ -0.53
BBS4-202ENST00000395205 TM6SF1Q9BZW5 370 aa11.76□□□□□ -0.53
BBS4-202ENST00000395205 CPA1P15085 419 aa11.75□□□□□ -0.53
BBS4-202ENST00000395205 SDR42E1Q8WUS8 393 aa11.75□□□□□ -0.53
BBS4-202ENST00000395205 NEK1Q96PY6 1258 aa11.75□□□□□ -0.53
BBS4-202ENST00000395205 FHDC1Q9C0D6 1143 aaPredicted RBP11.75□□□□□ -0.53
BBS4-202ENST00000395205 TAOK3Q9H2K8 898 aa11.75□□□□□ -0.53
BBS4-202ENST00000395205 ZSWIM6Q9HCJ5 1215 aa11.75□□□□□ -0.53
BBS4-202ENST00000395205 TTF2Q9UNY4 1162 aaKnown RBP11.75□□□□□ -0.53
BBS4-202ENST00000395205 IARSP41252 1262 aaKnown RBP11.75□□□□□ -0.53
BBS4-202ENST00000395205 GSE1Q14687 1217 aa11.75□□□□□ -0.53
BBS4-202ENST00000395205 BLOC1S2Q6QNY1 142 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms