RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 ITGBL1O95965 494 aaPredicted RBP10.34□□□□□ -0.75
HERC4-203ENST00000395185 IL1R1P14778 569 aa10.34□□□□□ -0.75
HERC4-203ENST00000395185 GSPT1P15170 499 aaKnown RBP10.34□□□□□ -0.75
HERC4-203ENST00000395185 ATP5JP18859 108 aa10.34□□□□□ -0.75
HERC4-203ENST00000395185 ZNF280AP59817 542 aaPredicted RBP10.34□□□□□ -0.75
HERC4-203ENST00000395185 PUM3Q15397 648 aaKnown RBP10.34□□□□□ -0.75
HERC4-203ENST00000395185 TBC1D10BQ4KMP7 808 aaPredicted RBP10.34□□□□□ -0.75
HERC4-203ENST00000395185 DACT2Q5SW24 774 aa10.34□□□□□ -0.75
HERC4-203ENST00000395185 TTC22Q5TAA0 569 aa10.34□□□□□ -0.75
HERC4-203ENST00000395185 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.34□□□□□ -0.75
HERC4-203ENST00000395185 LPIN2Q92539 896 aa10.34□□□□□ -0.75
HERC4-203ENST00000395185 DBNDD2Q9BQY9 259 aa10.34□□□□□ -0.75
HERC4-203ENST00000395185 TLR7Q9NYK1 1049 aaKnown RBP10.34□□□□□ -0.75
HERC4-203ENST00000395185 PGAP2Q9UHJ9 254 aa10.34□□□□□ -0.75
HERC4-203ENST00000395185 FER1L6Q2WGJ9 1857 aa10.34□□□□□ -0.75
HERC4-203ENST00000395185 IFIT2P09913 472 aaKnown RBP10.33□□□□□ -0.76
HERC4-203ENST00000395185 FKBP1AP62942 108 aaKnown RBP10.33□□□□□ -0.76
HERC4-203ENST00000395185 KIF4BQ2VIQ3 1234 aa10.33□□□□□ -0.76
HERC4-203ENST00000395185 FBXO33Q7Z6M2 555 aa10.33□□□□□ -0.76
HERC4-203ENST00000395185 SULF1Q8IWU6 871 aa10.33□□□□□ -0.76
HERC4-203ENST00000395185 FAM84BQ96KN1 310 aaPredicted RBP10.33□□□□□ -0.76
HERC4-203ENST00000395185 GMLQ99445 158 aa10.33□□□□□ -0.76
HERC4-203ENST00000395185 CCDC8Q9H0W5 538 aaPredicted RBP10.33□□□□□ -0.76
HERC4-203ENST00000395185 MYOZ2Q9NPC6 264 aa10.33□□□□□ -0.76
HERC4-203ENST00000395185 MYH3P11055 1940 aa10.33□□□□□ -0.76
HERC4-203ENST00000395185 MYO1BO43795 1136 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 GLRX3O76003 335 aaKnown RBP10.32□□□□□ -0.76
HERC4-203ENST00000395185 SLC34A2O95436 690 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 KLRK1P26718 216 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 GYG1P46976 350 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 HIRAP54198 1017 aaPredicted RBP10.32□□□□□ -0.76
HERC4-203ENST00000395185 SCARF1Q14162 830 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 ATP2B3Q16720 1220 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 C8orf34Q49A92 452 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 KRT26Q7Z3Y9 468 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 USP48Q86UV5 1035 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 TICAM2Q86XR7 235 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 TDRD7Q8NHU6 1098 aaKnown RBP10.32□□□□□ -0.76
HERC4-203ENST00000395185 TBC1D22AQ8WUA7 517 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 XAGE2Q96GT9 111 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 ZNF609O15014 1411 aa10.32□□□□□ -0.76
HERC4-203ENST00000395185 SDSP20132 328 aa10.31□□□□□ -0.76
HERC4-203ENST00000395185 ADORA1P30542 326 aa10.31□□□□□ -0.76
HERC4-203ENST00000395185 RBM5P52756 815 aaKnown RBP eCLIP10.31□□□□□ -0.76
HERC4-203ENST00000395185 DLGAP5Q15398 846 aa10.31□□□□□ -0.76
HERC4-203ENST00000395185 GORABQ5T7V8 394 aa10.31□□□□□ -0.76
HERC4-203ENST00000395185 KIAA0825Q8IV33 1275 aa10.31□□□□□ -0.76
HERC4-203ENST00000395185 TRPM4Q8TD43 1214 aa10.31□□□□□ -0.76
HERC4-203ENST00000395185 HAUS7Q99871 368 aa10.31□□□□□ -0.76
HERC4-203ENST00000395185 BACH2Q9BYV9 841 aa10.31□□□□□ -0.76
HERC4-203ENST00000395185 ABT1Q9ULW3 272 aaKnown RBP10.31□□□□□ -0.76
HERC4-203ENST00000395185 SBF1O95248 1867 aa10.31□□□□□ -0.76
HERC4-203ENST00000395185 PASKQ96RG2 1323 aa10.31□□□□□ -0.76
HERC4-203ENST00000395185 WDR90Q96KV7 1748 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 SHTN1A0MZ66 631 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 ERC2O15083 957 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 CELF2O95319 508 aaKnown RBP10.3□□□□□ -0.76
HERC4-203ENST00000395185 BCAMP50895 628 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 CHAF1AQ13111 956 aaPredicted RBP10.3□□□□□ -0.76
HERC4-203ENST00000395185 DEFB115Q30KQ5 88 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 MFSD14BQ5SR56 506 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 TSHZ3Q63HK5 1081 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 DNAJC5GQ8N7S2 189 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 WDR66Q8TBY9 1149 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 KLRG1Q96E93 195 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 NEUROD6Q96NK8 337 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 MXD3Q9BW11 206 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 GLIS2Q9BZE0 524 aaPredicted RBP10.3□□□□□ -0.76
HERC4-203ENST00000395185 PCDH10Q9P2E7 1040 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 FAM205AQ6ZU69 1335 aa10.3□□□□□ -0.76
HERC4-203ENST00000395185 COL4A5P29400 1685 aa10.29□□□□□ -0.76
HERC4-203ENST00000395185 F8W031 263 aaPredicted RBP10.29□□□□□ -0.76
HERC4-203ENST00000395185 ARID4AP29374 1257 aaPredicted RBP10.29□□□□□ -0.76
HERC4-203ENST00000395185 ECE1P42892 770 aa10.29□□□□□ -0.76
HERC4-203ENST00000395185 ANGEL2Q5VTE6 544 aaKnown RBP10.29□□□□□ -0.76
HERC4-203ENST00000395185 CCDC102BQ68D86 513 aa10.29□□□□□ -0.76
HERC4-203ENST00000395185 C2orf69Q8N8R5 385 aa10.29□□□□□ -0.76
HERC4-203ENST00000395185 GPATCH3Q96I76 525 aa10.29□□□□□ -0.76
HERC4-203ENST00000395185 ZNF408Q9H9D4 720 aa10.29□□□□□ -0.76
HERC4-203ENST00000395185 SUGT1Q9Y2Z0 365 aa10.29□□□□□ -0.76
HERC4-203ENST00000395185 TRAF5O00463 557 aa10.28□□□□□ -0.76
HERC4-203ENST00000395185 SEMA3EO15041 775 aa10.28□□□□□ -0.76
HERC4-203ENST00000395185 NF2P35240 595 aa10.28□□□□□ -0.76
HERC4-203ENST00000395185 HTRA3P83110 453 aa10.28□□□□□ -0.76
HERC4-203ENST00000395185 PAXIP1Q6ZW49 1069 aaPredicted RBP10.28□□□□□ -0.76
HERC4-203ENST00000395185 IFNL1Q8IU54 200 aa10.28□□□□□ -0.76
HERC4-203ENST00000395185 EVI5LQ96CN4 794 aa10.28□□□□□ -0.76
HERC4-203ENST00000395185 MRIQ9BWK5 157 aa10.28□□□□□ -0.76
HERC4-203ENST00000395185 GGA3Q9NZ52 723 aa10.28□□□□□ -0.76
HERC4-203ENST00000395185 DENND2AQ9ULE3 1009 aa10.28□□□□□ -0.76
HERC4-203ENST00000395185 TTF2Q9UNY4 1162 aaKnown RBP10.28□□□□□ -0.76
HERC4-203ENST00000395185 JAG2Q9Y219 1238 aa10.28□□□□□ -0.76
HERC4-203ENST00000395185 PITPNM2Q9BZ72 1349 aa10.28□□□□□ -0.76
HERC4-203ENST00000395185 WNT10BO00744 389 aa10.27□□□□□ -0.77
HERC4-203ENST00000395185 EGFRP00533 1210 aa10.27□□□□□ -0.77
HERC4-203ENST00000395185 UQCRFS1P1P0C7P4 283 aa10.27□□□□□ -0.77
HERC4-203ENST00000395185 PHKA1P46020 1223 aa10.27□□□□□ -0.77
HERC4-203ENST00000395185 HDLBPQ00341 1268 aaKnown RBP10.27□□□□□ -0.77
HERC4-203ENST00000395185 NBPF9Q3BBW0 867 aa10.27□□□□□ -0.77
HERC4-203ENST00000395185 CFAP100Q494V2 611 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms