RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 PPP1R12BO60237 982 aaPredicted RBP22.83■■□□□ 1.25
PDLIM7-205ENST00000393551 API5Q9BZZ5 524 aaKnown RBP22.83■■□□□ 1.25
PDLIM7-205ENST00000393551 LRRFIP2Q9Y608 721 aaKnown RBP22.83■■□□□ 1.25
PDLIM7-205ENST00000393551 TBC1D22AQ8WUA7 517 aa22.82■■□□□ 1.24
PDLIM7-205ENST00000393551 SLC10A4Q96EP9 437 aa22.82■■□□□ 1.24
PDLIM7-205ENST00000393551 MEIS3Q99687 375 aa22.82■■□□□ 1.24
PDLIM7-205ENST00000393551 SIL1Q9H173 461 aa22.82■■□□□ 1.24
PDLIM7-205ENST00000393551 TNRC18O15417 2968 aaPredicted RBP22.81■■□□□ 1.24
PDLIM7-205ENST00000393551 TCP10L2B9ZVM9 353 aa22.81■■□□□ 1.24
PDLIM7-205ENST00000393551 FRAT2O75474 233 aaPredicted RBP22.81■■□□□ 1.24
PDLIM7-205ENST00000393551 IFIT1P09914 478 aaKnown RBP22.81■■□□□ 1.24
PDLIM7-205ENST00000393551 GJA5P36382 358 aa22.81■■□□□ 1.24
PDLIM7-205ENST00000393551 RGS19P49795 217 aa22.81■■□□□ 1.24
PDLIM7-205ENST00000393551 HDLBPQ00341 1268 aaKnown RBP22.81■■□□□ 1.24
PDLIM7-205ENST00000393551 ZNF296Q8WUU4 475 aaPredicted RBP22.81■■□□□ 1.24
PDLIM7-205ENST00000393551 LPIN2Q92539 896 aa22.81■■□□□ 1.24
PDLIM7-205ENST00000393551 WNK4Q96J92 1243 aa22.81■■□□□ 1.24
PDLIM7-205ENST00000393551 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.81■■□□□ 1.24
PDLIM7-205ENST00000393551 SREBF2Q12772 1141 aa22.8■■□□□ 1.24
PDLIM7-205ENST00000393551 TMEM39BQ9GZU3 492 aa22.8■■□□□ 1.24
PDLIM7-205ENST00000393551 PA2G4Q9UQ80 394 aaKnown RBP22.8■■□□□ 1.24
PDLIM7-205ENST00000393551 HTTP42858 3142 aa22.8■■□□□ 1.24
PDLIM7-205ENST00000393551 UNCXA6NJT0 531 aa22.79■■□□□ 1.24
PDLIM7-205ENST00000393551 CIAO1O76071 339 aa22.79■■□□□ 1.24
PDLIM7-205ENST00000393551 SLC5A1P13866 664 aa22.79■■□□□ 1.24
PDLIM7-205ENST00000393551 CACNB3P54284 484 aa22.79■■□□□ 1.24
PDLIM7-205ENST00000393551 TNFAIP1Q13829 316 aa22.79■■□□□ 1.24
PDLIM7-205ENST00000393551 INTS3Q68E01 1043 aaKnown RBP22.79■■□□□ 1.24
PDLIM7-205ENST00000393551 APOBEC3HQ6NTF7 200 aaKnown RBP22.79■■□□□ 1.24
PDLIM7-205ENST00000393551 CTU1Q7Z7A3 348 aaKnown RBP22.79■■□□□ 1.24
PDLIM7-205ENST00000393551 ARHGAP45Q92619 1136 aa22.79■■□□□ 1.24
PDLIM7-205ENST00000393551 MRIQ9BWK5 157 aa22.79■■□□□ 1.24
PDLIM7-205ENST00000393551 CFHR5Q9BXR6 569 aa22.79■■□□□ 1.24
PDLIM7-205ENST00000393551 TNNQ9UQP3 1299 aa22.79■■□□□ 1.24
PDLIM7-205ENST00000393551 GPR25O00155 361 aa22.78■■□□□ 1.24
PDLIM7-205ENST00000393551 ZBTB48P10074 688 aaPredicted RBP22.78■■□□□ 1.24
PDLIM7-205ENST00000393551 TEKT1Q969V4 418 aa22.78■■□□□ 1.24
PDLIM7-205ENST00000393551 ZDHHC15Q96MV8 337 aa22.78■■□□□ 1.24
PDLIM7-205ENST00000393551 FBXO3Q9UK99 471 aa22.78■■□□□ 1.24
PDLIM7-205ENST00000393551 IREB2P48200 963 aaKnown RBP22.77■■□□□ 1.24
PDLIM7-205ENST00000393551 NOM1Q5C9Z4 860 aaKnown RBP22.77■■□□□ 1.24
PDLIM7-205ENST00000393551 COPRSQ9NQ92 184 aa22.77■■□□□ 1.24
PDLIM7-205ENST00000393551 MANSC4A6NHS7 340 aaPredicted RBP22.76■■□□□ 1.23
PDLIM7-205ENST00000393551 IGF2BP3O00425 579 aaKnown RBP eCLIP22.76■■□□□ 1.23
PDLIM7-205ENST00000393551 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.76■■□□□ 1.23
PDLIM7-205ENST00000393551 IFNL1Q8IU54 200 aa22.76■■□□□ 1.23
PDLIM7-205ENST00000393551 ANKRD13AQ8IZ07 590 aa22.76■■□□□ 1.23
PDLIM7-205ENST00000393551 SUGT1Q9Y2Z0 365 aa22.76■■□□□ 1.23
PDLIM7-205ENST00000393551 BCAR3O75815 825 aa22.75■■□□□ 1.23
PDLIM7-205ENST00000393551 ATP2B3Q16720 1220 aa22.75■■□□□ 1.23
PDLIM7-205ENST00000393551 HHIPL2Q6UWX4 724 aa22.75■■□□□ 1.23
PDLIM7-205ENST00000393551 CEP126Q9P2H0 1117 aa22.75■■□□□ 1.23
PDLIM7-205ENST00000393551 CENPFP49454 3210 aa22.75■■□□□ 1.23
PDLIM7-205ENST00000393551 TRIM27P14373 513 aa22.74■■□□□ 1.23
PDLIM7-205ENST00000393551 IL15P40933 162 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-205ENST00000393551 INHBEP58166 350 aa22.74■■□□□ 1.23
PDLIM7-205ENST00000393551 CNKSR2Q8WXI2 1034 aa22.74■■□□□ 1.23
PDLIM7-205ENST00000393551 ELP3Q9H9T3 547 aa22.74■■□□□ 1.23
PDLIM7-205ENST00000393551 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-205ENST00000393551 ADORA1P30542 326 aa22.73■■□□□ 1.23
PDLIM7-205ENST00000393551 PHKA1P46020 1223 aa22.73■■□□□ 1.23
PDLIM7-205ENST00000393551 TNNI2P48788 182 aa22.73■■□□□ 1.23
PDLIM7-205ENST00000393551 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.73■■□□□ 1.236e-7■□□□□ 8.7
PDLIM7-205ENST00000393551 WDR66Q8TBY9 1149 aa22.73■■□□□ 1.23
PDLIM7-205ENST00000393551 PTPN18Q99952 460 aa22.73■■□□□ 1.23
PDLIM7-205ENST00000393551 PRDX5P30044 214 aa22.72■■□□□ 1.23
PDLIM7-205ENST00000393551 MIER1Q8N108 512 aa22.72■■□□□ 1.23
PDLIM7-205ENST00000393551 OPTNQ96CV9 577 aa22.72■■□□□ 1.23
PDLIM7-205ENST00000393551 MS4A4AQ96JQ5 239 aa22.72■■□□□ 1.23
PDLIM7-205ENST00000393551 MAST3O60307 1309 aa22.72■■□□□ 1.23
PDLIM7-205ENST00000393551 TESPA1A2RU30 521 aaPredicted RBP22.71■■□□□ 1.23
PDLIM7-205ENST00000393551 ALDH1A1P00352 501 aa22.71■■□□□ 1.23
PDLIM7-205ENST00000393551 MLLT1Q03111 559 aaPredicted RBP22.71■■□□□ 1.23
PDLIM7-205ENST00000393551 MTX1Q13505 466 aa22.71■■□□□ 1.23
PDLIM7-205ENST00000393551 VGLL4Q14135 290 aa22.71■■□□□ 1.23
PDLIM7-205ENST00000393551 DIXDC1Q155Q3 683 aa22.71■■□□□ 1.23
PDLIM7-205ENST00000393551 FKBP1CQ5VVH2 108 aa22.71■■□□□ 1.23
PDLIM7-205ENST00000393551 FAM83AQ86UY5 434 aa22.71■■□□□ 1.23
PDLIM7-205ENST00000393551 HDAC5Q9UQL6 1122 aa22.71■■□□□ 1.23
PDLIM7-205ENST00000393551 DAGLAQ9Y4D2 1042 aa22.71■■□□□ 1.23
PDLIM7-205ENST00000393551 FKTNO75072 461 aa22.7■■□□□ 1.22
PDLIM7-205ENST00000393551 MAP3K9P80192 1104 aa22.7■■□□□ 1.22
PDLIM7-205ENST00000393551 ATF7IPQ6VMQ6 1270 aa22.7■■□□□ 1.22
PDLIM7-205ENST00000393551 HPS5Q9UPZ3 1129 aa22.7■■□□□ 1.22
PDLIM7-205ENST00000393551 SRGAP3O43295 1099 aa22.69■■□□□ 1.22
PDLIM7-205ENST00000393551 GNAI3P08754 354 aa22.69■■□□□ 1.22
PDLIM7-205ENST00000393551 TIMM10P62072 90 aa22.69■■□□□ 1.22
PDLIM7-205ENST00000393551 CCDC102BQ68D86 513 aa22.69■■□□□ 1.22
PDLIM7-205ENST00000393551 SALL1Q9NSC2 1324 aa22.68■■□□□ 1.22
PDLIM7-205ENST00000393551 ZBTB22O15209 634 aa22.68■■□□□ 1.22
PDLIM7-205ENST00000393551 CDC42EP5Q6NZY7 148 aa22.68■■□□□ 1.22
PDLIM7-205ENST00000393551 FRAT1Q92837 279 aaPredicted RBP22.68■■□□□ 1.22
PDLIM7-205ENST00000393551 CLUAP1Q96AJ1 413 aa22.68■■□□□ 1.22
PDLIM7-205ENST00000393551 MYH2Q9UKX2 1941 aa22.68■■□□□ 1.22
PDLIM7-205ENST00000393551 IPO8O15397 1037 aaKnown RBP22.67■■□□□ 1.22
PDLIM7-205ENST00000393551 SOX10P56693 466 aa22.67■■□□□ 1.22
PDLIM7-205ENST00000393551 TFCP2Q12800 502 aa22.67■■□□□ 1.22
PDLIM7-205ENST00000393551 CRHR2Q13324 411 aa22.67■■□□□ 1.22
PDLIM7-205ENST00000393551 PKN2Q16513 984 aaKnown RBP22.67■■□□□ 1.22
PDLIM7-205ENST00000393551 GNL3LQ9NVN8 582 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms