RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 LRRFIP1Q32MZ4 808 aaKnown RBP16.12■□□□□ 0.17
USP44-202ENST00000393091 GPRC5DQ9NZD1 345 aa16.12■□□□□ 0.17
USP44-202ENST00000393091 RPAP1Q9BWH6 1393 aaPredicted RBP16.12■□□□□ 0.17
USP44-202ENST00000393091 MFSD14BQ5SR56 506 aa16.12■□□□□ 0.17
USP44-202ENST00000393091 G3V3G9 751 aa16.11■□□□□ 0.17
USP44-202ENST00000393091 DCAF8Q5TAQ9 597 aa16.11■□□□□ 0.17
USP44-202ENST00000393091 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
USP44-202ENST00000393091 POTECB2RU33 542 aa16.11■□□□□ 0.17
USP44-202ENST00000393091 ADD2P35612 726 aa16.11■□□□□ 0.17
USP44-202ENST00000393091 FKBP1CQ5VVH2 108 aa16.11■□□□□ 0.17
USP44-202ENST00000393091 DPY19L2Q6NUT2 758 aa16.11■□□□□ 0.17
USP44-202ENST00000393091 ERICH6Q7L0X2 663 aa16.11■□□□□ 0.17
USP44-202ENST00000393091 PITPNM2Q9BZ72 1349 aa16.11■□□□□ 0.17
USP44-202ENST00000393091 HIP1O00291 1037 aa16.1■□□□□ 0.17
USP44-202ENST00000393091 LDHBP07195 334 aaKnown RBP16.1■□□□□ 0.17
USP44-202ENST00000393091 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
USP44-202ENST00000393091 GPR75-ASB3A0A0A6YYF3 556 aa16.1■□□□□ 0.17
USP44-202ENST00000393091 BOLA2Q9H3K6 86 aa16.1■□□□□ 0.17
USP44-202ENST00000393091 MROH7-TTC4A0A0A0MT08 1334 aa16.1■□□□□ 0.17
USP44-202ENST00000393091 PI16Q6UXB8 463 aa16.1■□□□□ 0.17
USP44-202ENST00000393091 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.1■□□□□ 0.17
USP44-202ENST00000393091 MYH1P12882 1939 aa16.09■□□□□ 0.17
USP44-202ENST00000393091 USP50Q70EL3 339 aaPredicted RBP16.09■□□□□ 0.17
USP44-202ENST00000393091 WWC3Q9ULE0 1092 aa16.09■□□□□ 0.17
USP44-202ENST00000393091 RAD50Q92878 1312 aa16.09■□□□□ 0.17
USP44-202ENST00000393091 GMPSP49915 693 aaPredicted RBP16.09■□□□□ 0.17
USP44-202ENST00000393091 MECOMQ03112 1051 aa16.09■□□□□ 0.17
USP44-202ENST00000393091 MAP3K12Q12852 859 aa16.09■□□□□ 0.17
USP44-202ENST00000393091 ANTXR1Q9H6X2 564 aa16.09■□□□□ 0.17
USP44-202ENST00000393091 TRPM7Q96QT4 1865 aa16.08■□□□□ 0.17
USP44-202ENST00000393091 RAD17O75943 681 aa16.08■□□□□ 0.17
USP44-202ENST00000393091 LDHCP07864 332 aa16.08■□□□□ 0.17
USP44-202ENST00000393091 USP17L8P0C7I0 530 aa16.08■□□□□ 0.17
USP44-202ENST00000393091 GRIK5Q16478 980 aa16.08■□□□□ 0.17
USP44-202ENST00000393091 ZC3H15Q8WU90 426 aaKnown RBP16.08■□□□□ 0.17
USP44-202ENST00000393091 HELLSQ9NRZ9 838 aa16.08■□□□□ 0.17
USP44-202ENST00000393091 HDAC9Q9UKV0 1011 aa16.08■□□□□ 0.17
USP44-202ENST00000393091 ZMYM6O95789 1325 aa16.08■□□□□ 0.17
USP44-202ENST00000393091 EPB41L2O43491 1005 aaKnown RBP16.08■□□□□ 0.16
USP44-202ENST00000393091 ZMYM1Q5SVZ6 1142 aa16.08■□□□□ 0.16
USP44-202ENST00000393091 IQCA1LA6NCM1 817 aa16.08■□□□□ 0.16
USP44-202ENST00000393091 ADARB2Q9NS39 739 aaKnown RBP16.08■□□□□ 0.16
USP44-202ENST00000393091 GOLIM4O00461 696 aa16.07■□□□□ 0.16
USP44-202ENST00000393091 RNF113AO15541 343 aaKnown RBP16.07■□□□□ 0.16
USP44-202ENST00000393091 SDSP20132 328 aa16.07■□□□□ 0.16
USP44-202ENST00000393091 PRDX5P30044 214 aa16.07■□□□□ 0.16
USP44-202ENST00000393091 PDE6AP16499 860 aa16.07■□□□□ 0.16
USP44-202ENST00000393091 APOBEC3HQ6NTF7 200 aaKnown RBP16.06■□□□□ 0.16
USP44-202ENST00000393091 RIOK1Q9BRS2 568 aaKnown RBP16.06■□□□□ 0.16
USP44-202ENST00000393091 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
USP44-202ENST00000393091 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
USP44-202ENST00000393091 CRKP46108 304 aa16.06■□□□□ 0.16
USP44-202ENST00000393091 APPBP2Q92624 585 aa16.06■□□□□ 0.16
USP44-202ENST00000393091 TEKT1Q969V4 418 aa16.06■□□□□ 0.16
USP44-202ENST00000393091 IDI2Q9BXS1 227 aa16.06■□□□□ 0.16
USP44-202ENST00000393091 MYOZ2Q9NPC6 264 aa16.06■□□□□ 0.16
USP44-202ENST00000393091 HACL1Q9UJ83 578 aa16.06■□□□□ 0.16
USP44-202ENST00000393091 GREB1LQ9C091 1923 aaPredicted RBP16.05■□□□□ 0.16
USP44-202ENST00000393091 FRAT2O75474 233 aaPredicted RBP16.05■□□□□ 0.16
USP44-202ENST00000393091 CNOT7Q9UIV1 285 aaKnown RBP16.05■□□□□ 0.16
USP44-202ENST00000393091 DAGLAQ9Y4D2 1042 aa16.05■□□□□ 0.16
USP44-202ENST00000393091 DDNO94850 711 aaPredicted RBP16.05■□□□□ 0.16
USP44-202ENST00000393091 TSHZ3Q63HK5 1081 aa16.05■□□□□ 0.16
USP44-202ENST00000393091 TTF2Q9UNY4 1162 aaKnown RBP16.05■□□□□ 0.16
USP44-202ENST00000393091 IQSEC3Q9UPP2 1182 aaPredicted RBP16.05■□□□□ 0.16
USP44-202ENST00000393091 ATRNL1Q5VV63 1379 aa16.05■□□□□ 0.16
USP44-202ENST00000393091 PLCG2P16885 1265 aa16.04■□□□□ 0.16
USP44-202ENST00000393091 CHAF1AQ13111 956 aaPredicted RBP16.04■□□□□ 0.16
USP44-202ENST00000393091 SPDYE2Q495Y8 402 aa16.04■□□□□ 0.16
USP44-202ENST00000393091 GIMAP6Q6P9H5 292 aa16.04■□□□□ 0.16
USP44-202ENST00000393091 RHBDL3P58872 404 aa16.04■□□□□ 0.16
USP44-202ENST00000393091 PNMA8AQ86V59 439 aaPredicted RBP16.04■□□□□ 0.16
USP44-202ENST00000393091 DNAJC2Q99543 621 aaKnown RBP16.04■□□□□ 0.16
USP44-202ENST00000393091 MXD3Q9BW11 206 aa16.04■□□□□ 0.16
USP44-202ENST00000393091 MKRN1Q9UHC7 482 aaKnown RBP16.04■□□□□ 0.16
USP44-202ENST00000393091 PPP2R3BQ9Y5P8 575 aa16.04■□□□□ 0.16
USP44-202ENST00000393091 TBC1D9Q6ZT07 1266 aa16.03■□□□□ 0.16
USP44-202ENST00000393091 MICALL2Q8IY33 904 aa16.03■□□□□ 0.16
USP44-202ENST00000393091 LRP2BPQ9P2M1 347 aa16.03■□□□□ 0.16
USP44-202ENST00000393091 NAA16Q6N069 864 aaPredicted RBP16.03■□□□□ 0.16
USP44-202ENST00000393091 TAF1DQ9H5J8 278 aaPredicted RBP16.03■□□□□ 0.16
USP44-202ENST00000393091 H7C1D1 291 aa16.03■□□□□ 0.16
USP44-202ENST00000393091 CHMLP26374 656 aa16.03■□□□□ 0.16
USP44-202ENST00000393091 ADGRA1Q86SQ6 560 aa16.03■□□□□ 0.16
USP44-202ENST00000393091 OGFOD1Q8N543 542 aa16.03■□□□□ 0.16
USP44-202ENST00000393091 ZNF532Q9HCE3 1301 aa16.02■□□□□ 0.16
USP44-202ENST00000393091 EIF5BO60841 1220 aaKnown RBP16.02■□□□□ 0.16
USP44-202ENST00000393091 DZIP1Q86YF9 867 aaKnown RBP16.02■□□□□ 0.16
USP44-202ENST00000393091 EDC3Q96F86 508 aaKnown RBP16.02■□□□□ 0.16
USP44-202ENST00000393091 ZBTB12Q9Y330 459 aaPredicted RBP16.02■□□□□ 0.16
USP44-202ENST00000393091 GNAT2P19087 354 aa16.02■□□□□ 0.15
USP44-202ENST00000393091 ALX1Q15699 326 aa16.02■□□□□ 0.15
USP44-202ENST00000393091 CFAP100Q494V2 611 aa16.02■□□□□ 0.15
USP44-202ENST00000393091 SLC9C2Q5TAH2 1124 aa16.02■□□□□ 0.15
USP44-202ENST00000393091 FAM83AQ86UY5 434 aa16.02■□□□□ 0.15
USP44-202ENST00000393091 LMOD1P29536 600 aaPredicted RBP16.01■□□□□ 0.15
USP44-202ENST00000393091 METTL16Q86W50 562 aaKnown RBP16.01■□□□□ 0.15
USP44-202ENST00000393091 POLR2AP24928 1970 aaKnown RBP16.01■□□□□ 0.15
USP44-202ENST00000393091 MAGEB6Q8N7X4 407 aa16.01■□□□□ 0.15
USP44-202ENST00000393091 WNT10BO00744 389 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms