RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 RANBP1P43487 201 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 PPP2R3AQ06190 1150 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 RUBCNQ92622 972 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 IBTKQ9P2D0 1353 aaPredicted RBP11.06□□□□□ -0.64
VLDLR-203ENST00000382100 ISM2Q6H9L7 571 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 CACTINQ8WUQ7 758 aaKnown RBP11.06□□□□□ -0.64
VLDLR-203ENST00000382100 KLHL14Q9P2G3 628 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 GOLGA8JA6NMD2 632 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 HNRNPRO43390 633 aaKnown RBP11.06□□□□□ -0.64
VLDLR-203ENST00000382100 RAD21O60216 631 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 ADCY5O95622 1261 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 SKIP12755 728 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 NDE1Q9NXR1 346 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 BRD2P25440 801 aaKnown RBP11.06□□□□□ -0.64
VLDLR-203ENST00000382100 TAF11Q15544 211 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.06□□□□□ -0.64
VLDLR-203ENST00000382100 ZNF277Q9NRM2 450 aaPredicted RBP11.06□□□□□ -0.64
VLDLR-203ENST00000382100 RTEL1Q9NZ71 1219 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 GOLGA8MH3BSY2 632 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 IFIT1P09914 478 aaKnown RBP11.06□□□□□ -0.64
VLDLR-203ENST00000382100 NBPF20Q3BBV1 942 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
VLDLR-203ENST00000382100 LEO1Q8WVC0 666 aaPredicted RBP11.06□□□□□ -0.64
VLDLR-203ENST00000382100 HNRNPCL1O60812 293 aaKnown RBP11.05□□□□□ -0.64
VLDLR-203ENST00000382100 LRRC8BQ6P9F7 803 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 TRIM4Q9C037 500 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 MAGEF1Q9HAY2 307 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 TROVE2P10155 538 aaKnown RBP eCLIP11.05□□□□□ -0.64
VLDLR-203ENST00000382100 CEP85LQ5SZL2 805 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 GGT6Q6P531 493 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 SPZ1Q9BXG8 430 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 VPS37BQ9H9H4 285 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 ASXL3Q9C0F0 2248 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 H0YCG3 227 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 TMTC1Q8IUR5 882 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 CCDC169A6NNP5 214 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 MRPS9P82933 396 aaKnown RBP11.05□□□□□ -0.64
VLDLR-203ENST00000382100 MTRQ99707 1265 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 SERPINB10P48595 397 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 NOLC1Q14978 699 aaKnown RBP eCLIP11.05□□□□□ -0.64
VLDLR-203ENST00000382100 CAVIN4Q5BKX8 364 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 MRPS27Q92552 414 aaKnown RBP11.05□□□□□ -0.64
VLDLR-203ENST00000382100 NOP2P46087 812 aaKnown RBP11.05□□□□□ -0.64
VLDLR-203ENST00000382100 RASEFQ8IZ41 740 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 MICALL1Q8N3F8 863 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 HSPA6P17066 643 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 PPP2R5DQ14738 602 aa11.05□□□□□ -0.64
VLDLR-203ENST00000382100 ERCC5P28715 1186 aaPredicted RBP11.04□□□□□ -0.64
VLDLR-203ENST00000382100 NR1H3Q13133 447 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 CNNM1Q9NRU3 951 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 MID2Q9UJV3 735 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 GOLGA5Q8TBA6 731 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 KRR1Q13601 381 aaKnown RBP11.04□□□□□ -0.64
VLDLR-203ENST00000382100 DONSONQ9NYP3 566 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 GNA14O95837 355 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 SYKP43405 635 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 UBASH3AP57075 661 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 DTX3LQ8TDB6 740 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 STARD3NLO95772 234 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 FKBP4Q02790 459 aaKnown RBP eCLIP11.04□□□□□ -0.64
VLDLR-203ENST00000382100 ENAHQ8N8S7 591 aaPredicted RBP11.04□□□□□ -0.64
VLDLR-203ENST00000382100 UIMC1Q96RL1 719 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 LLPHQ9BRT6 129 aaKnown RBP11.04□□□□□ -0.64
VLDLR-203ENST00000382100 TXLNGQ9NUQ3 528 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 MSH6P52701 1360 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 SOX12O15370 315 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 DDX5P17844 614 aaKnown RBP11.04□□□□□ -0.64
VLDLR-203ENST00000382100 TEX12Q9BXU0 123 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 BRPF3Q9ULD4 1205 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 AOX1Q06278 1338 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 FOXD4L6Q3SYB3 417 aaPredicted RBP11.04□□□□□ -0.64
VLDLR-203ENST00000382100 CFAP221Q4G0U5 840 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 FOXD4L3Q6VB84 417 aaPredicted RBP11.04□□□□□ -0.64
VLDLR-203ENST00000382100 PPP1R21Q6ZMI0 780 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 GRK7Q8WTQ7 553 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 GOLGA8IPA6NC78 632 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 FOXP2O15409 715 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 MATR3P43243 847 aaKnown RBP eCLIP11.04□□□□□ -0.64
VLDLR-203ENST00000382100 SSRP1Q08945 709 aaKnown RBP11.04□□□□□ -0.64
VLDLR-203ENST00000382100 LIN9Q5TKA1 542 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 CABS1Q96KC9 395 aa11.04□□□□□ -0.64
VLDLR-203ENST00000382100 TIAM1Q13009 1591 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 ANKRD20A4Q4UJ75 823 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 ANKRD20A8PQ5CZ79 823 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 ANKRD20A2Q5SQ80 823 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 ANKRD20A1Q5TYW2 823 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 PSPC1Q8WXF1 523 aaKnown RBP11.03□□□□□ -0.64
VLDLR-203ENST00000382100 TRIM47Q96LD4 638 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 TTC41PQ6P2S7 1318 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 IQUBQ8NA54 791 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 VEZTQ9HBM0 779 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 PPIP5K1Q6PFW1 1433 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 TMEM232C9JQI7 657 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 PYGLP06737 847 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 DNAI1Q9UI46 699 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 FAM169AQ9Y6X4 670 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 NUP160Q12769 1436 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 PSMA3P25788 255 aa11.03□□□□□ -0.64
VLDLR-203ENST00000382100 NFKBIAP25963 317 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms