RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 ATF7IPQ6VMQ6 1270 aa9.62□□□□□ -0.87
FAM49A-201ENST00000381323 CTU1Q7Z7A3 348 aaKnown RBP9.62□□□□□ -0.87
FAM49A-201ENST00000381323 FAM84BQ96KN1 310 aaPredicted RBP9.62□□□□□ -0.87
FAM49A-201ENST00000381323 PRMT6Q96LA8 375 aaPredicted RBP9.62□□□□□ -0.87
FAM49A-201ENST00000381323 PGAP2Q9UHJ9 254 aa9.62□□□□□ -0.87
FAM49A-201ENST00000381323 SERPINA10Q9UK55 444 aa9.62□□□□□ -0.87
FAM49A-201ENST00000381323 MLLT1Q03111 559 aaPredicted RBP9.62□□□□□ -0.87
FAM49A-201ENST00000381323 PTPN12Q05209 780 aaKnown RBP9.62□□□□□ -0.87
FAM49A-201ENST00000381323 DDRGK1Q96HY6 314 aa9.62□□□□□ -0.87
FAM49A-201ENST00000381323 WRNIP1Q96S55 665 aa9.62□□□□□ -0.87
FAM49A-201ENST00000381323 WTIPA6NIX2 430 aaPredicted RBP9.61□□□□□ -0.87
FAM49A-201ENST00000381323 BAG3O95817 575 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 ZFYVE28Q9HCC9 887 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 PA2G4Q9UQ80 394 aaKnown RBP9.61□□□□□ -0.87
FAM49A-201ENST00000381323 TRIM17Q9Y577 477 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 SBF1O95248 1867 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 SLC10A3P09131 477 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 CACNB3P54284 484 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 HSP90AB4PQ58FF6 505 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 AMOTL1Q8IY63 956 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 USP44Q9H0E7 712 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 RNF186Q9NXI6 227 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 SCN4AP35499 1836 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 FER1L6Q2WGJ9 1857 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 MYCP01106 439 aaPredicted RBP9.61□□□□□ -0.87
FAM49A-201ENST00000381323 MAP3K9P80192 1104 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 SLC4A8Q2Y0W8 1093 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 NBPF12Q5TAG4 269 aaPredicted RBP9.61□□□□□ -0.87
FAM49A-201ENST00000381323 MEIS3Q99687 375 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 MCOLN1Q9GZU1 580 aa9.61□□□□□ -0.87
FAM49A-201ENST00000381323 UQCRFS1P1P0C7P4 283 aa9.6□□□□□ -0.87
FAM49A-201ENST00000381323 RARSP54136 660 aaKnown RBP9.6□□□□□ -0.87
FAM49A-201ENST00000381323 TDRD7Q8NHU6 1098 aaKnown RBP9.6□□□□□ -0.87
FAM49A-201ENST00000381323 FBXO3Q9UK99 471 aa9.6□□□□□ -0.87
FAM49A-201ENST00000381323 CCL15-CCL14A0A0B4J2E2 113 aa9.6□□□□□ -0.87
FAM49A-201ENST00000381323 IL1R1P14778 569 aa9.6□□□□□ -0.87
FAM49A-201ENST00000381323 CCL15Q16663 113 aa9.6□□□□□ -0.87
FAM49A-201ENST00000381323 SMCR8Q8TEV9 937 aaPredicted RBP9.6□□□□□ -0.87
FAM49A-201ENST00000381323 ERO1AQ96HE7 468 aa9.6□□□□□ -0.87
FAM49A-201ENST00000381323 ZNF341Q9BYN7 854 aa9.6□□□□□ -0.87
FAM49A-201ENST00000381323 ISY1Q9ULR0 285 aaKnown RBP9.6□□□□□ -0.87
FAM49A-201ENST00000381323 MIGA2Q7L4E1 593 aa9.6□□□□□ -0.87
FAM49A-201ENST00000381323 RASAL3Q86YV0 1011 aa9.6□□□□□ -0.87
FAM49A-201ENST00000381323 BRCA1P38398 1863 aaKnown RBP9.6□□□□□ -0.87
FAM49A-201ENST00000381323 IFIT2P09913 472 aaKnown RBP9.59□□□□□ -0.87
FAM49A-201ENST00000381323 FKBP1AP62942 108 aaKnown RBP9.59□□□□□ -0.87
FAM49A-201ENST00000381323 EFCC1Q9HA90 598 aa9.59□□□□□ -0.87
FAM49A-201ENST00000381323 GTF2A2P52657 109 aa9.59□□□□□ -0.87
FAM49A-201ENST00000381323 CSRNP1Q96S65 589 aa9.59□□□□□ -0.87
FAM49A-201ENST00000381323 SUGT1Q9Y2Z0 365 aa9.59□□□□□ -0.87
FAM49A-201ENST00000381323 KIAA1551Q9HCM1 1747 aa9.59□□□□□ -0.87
FAM49A-201ENST00000381323 IDH1O75874 414 aaKnown RBP9.59□□□□□ -0.87
FAM49A-201ENST00000381323 CASP7P55210 303 aa9.59□□□□□ -0.87
FAM49A-201ENST00000381323 TIMM10P62072 90 aa9.59□□□□□ -0.87
FAM49A-201ENST00000381323 NBPF11Q86T75 865 aa9.59□□□□□ -0.87
FAM49A-201ENST00000381323 ERC1Q8IUD2 1116 aa9.59□□□□□ -0.87
FAM49A-201ENST00000381323 RIPOR2Q9Y4F9 1068 aa9.59□□□□□ -0.87
FAM49A-201ENST00000381323 UTRNP46939 3433 aa9.59□□□□□ -0.88
FAM49A-201ENST00000381323 SEMA3EO15041 775 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 FMNL1O95466 1100 aaPredicted RBP9.58□□□□□ -0.88
FAM49A-201ENST00000381323 ARHGAP45Q92619 1136 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 GMLQ99445 158 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 TMEM39BQ9GZU3 492 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 SAGE1Q9NXZ1 904 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 A0A1B0GUL7 405 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 BCAR3O75815 825 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 HLA-DOAP06340 250 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 HOXD10P28358 340 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 C15orf52Q6ZUT6 534 aaKnown RBP9.58□□□□□ -0.88
FAM49A-201ENST00000381323 FZD1Q9UP38 647 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 CETPP11597 493 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 USP5P45974 858 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 SOX10P56693 466 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 HDLBPQ00341 1268 aaKnown RBP9.58□□□□□ -0.88
FAM49A-201ENST00000381323 SNAPC2Q13487 334 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 PKN2Q16513 984 aaKnown RBP9.58□□□□□ -0.88
FAM49A-201ENST00000381323 SPRYD7Q5W111 196 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 GADL1Q6ZQY3 521 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 GOLGB1Q14789 3259 aaKnown RBP9.58□□□□□ -0.88
FAM49A-201ENST00000381323 DLEC1Q9Y238 1755 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 GPR25O00155 361 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 PLCG2P16885 1265 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 TFCP2Q12800 502 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 OPTNQ96CV9 577 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 C1orf115Q9H7X2 142 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 SNRKQ9NRH2 765 aa9.58□□□□□ -0.88
FAM49A-201ENST00000381323 FAM205AQ6ZU69 1335 aa9.57□□□□□ -0.88
FAM49A-201ENST00000381323 DIXDC1Q155Q3 683 aa9.57□□□□□ -0.88
FAM49A-201ENST00000381323 NAA16Q6N069 864 aaPredicted RBP9.57□□□□□ -0.88
FAM49A-201ENST00000381323 SAMD1Q6SPF0 538 aaPredicted RBP9.57□□□□□ -0.88
FAM49A-201ENST00000381323 CLASRPQ8N2M8 674 aaKnown RBP9.57□□□□□ -0.88
FAM49A-201ENST00000381323 FEZ1Q99689 392 aa9.57□□□□□ -0.88
FAM49A-201ENST00000381323 RAD21O60216 631 aa9.57□□□□□ -0.88
FAM49A-201ENST00000381323 CIAO1O76071 339 aa9.57□□□□□ -0.88
FAM49A-201ENST00000381323 SPDYE2Q495Y8 402 aa9.57□□□□□ -0.88
FAM49A-201ENST00000381323 WDR78Q5VTH9 848 aa9.57□□□□□ -0.88
FAM49A-201ENST00000381323 WNK4Q96J92 1243 aa9.57□□□□□ -0.88
FAM49A-201ENST00000381323 ZBTB48P10074 688 aaPredicted RBP9.57□□□□□ -0.88
FAM49A-201ENST00000381323 FBXO33Q7Z6M2 555 aa9.57□□□□□ -0.88
FAM49A-201ENST00000381323 TEX11Q8IYF3 940 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms