RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 CLRN2A0PK11 232 aa21.1■□□□□ 0.97
RER1-202ENST00000378512 CCDC85CA6NKD9 419 aa21.1■□□□□ 0.97
RER1-202ENST00000378512 MKRN3Q13064 507 aaKnown RBP21.1■□□□□ 0.97
RER1-202ENST00000378512 DLGAP5Q15398 846 aa21.1■□□□□ 0.97
RER1-202ENST00000378512 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.1■□□□□ 0.97
RER1-202ENST00000378512 SSC5DA1L4H1 1573 aa21.09■□□□□ 0.97
RER1-202ENST00000378512 DGKZQ13574 1117 aa21.09■□□□□ 0.97
RER1-202ENST00000378512 CFAP100Q494V2 611 aa21.09■□□□□ 0.97
RER1-202ENST00000378512 APOBEC3FQ8IUX4 373 aaKnown RBP21.09■□□□□ 0.97
RER1-202ENST00000378512 TBC1D22AQ8WUA7 517 aa21.09■□□□□ 0.97
RER1-202ENST00000378512 PRMT6Q96LA8 375 aaPredicted RBP21.09■□□□□ 0.97
RER1-202ENST00000378512 SAGE1Q9NXZ1 904 aa21.09■□□□□ 0.97
RER1-202ENST00000378512 IQSEC3Q9UPP2 1182 aaPredicted RBP21.09■□□□□ 0.97
RER1-202ENST00000378512 AKAP11Q9UKA4 1901 aa21.09■□□□□ 0.97
RER1-202ENST00000378512 SPDYE2BA6NHP3 402 aa21.08■□□□□ 0.97
RER1-202ENST00000378512 SPDYE6P0CI01 402 aa21.08■□□□□ 0.97
RER1-202ENST00000378512 SERPINA10Q9UK55 444 aa21.08■□□□□ 0.97
RER1-202ENST00000378512 TFCP2Q12800 502 aa21.07■□□□□ 0.96
RER1-202ENST00000378512 MVPQ14764 893 aaKnown RBP21.07■□□□□ 0.96
RER1-202ENST00000378512 GRIK5Q16478 980 aa21.07■□□□□ 0.96
RER1-202ENST00000378512 DEFB129Q9H1M3 183 aa21.07■□□□□ 0.96
RER1-202ENST00000378512 C1orf115Q9H7X2 142 aa21.07■□□□□ 0.96
RER1-202ENST00000378512 SUGT1Q9Y2Z0 365 aa21.07■□□□□ 0.96
RER1-202ENST00000378512 HDLBPQ00341 1268 aaKnown RBP21.06■□□□□ 0.96
RER1-202ENST00000378512 MRIQ9BWK5 157 aa21.06■□□□□ 0.96
RER1-202ENST00000378512 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.06■□□□□ 0.96
RER1-202ENST00000378512 TTF2Q9UNY4 1162 aaKnown RBP21.06■□□□□ 0.96
RER1-202ENST00000378512 AKAP2Q9Y2D5 859 aa21.06■□□□□ 0.96
RER1-202ENST00000378512 NOP58Q9Y2X3 529 aaKnown RBP21.06■□□□□ 0.96
RER1-202ENST00000378512 A0A1B0GUL7 405 aa21.05■□□□□ 0.96
RER1-202ENST00000378512 SEMA3EO15041 775 aa21.05■□□□□ 0.96
RER1-202ENST00000378512 NF2P35240 595 aa21.05■□□□□ 0.96
RER1-202ENST00000378512 PDE3AQ14432 1141 aa21.05■□□□□ 0.96
RER1-202ENST00000378512 CEP85Q6P2H3 762 aa21.05■□□□□ 0.96
RER1-202ENST00000378512 ANGEL1Q9UNK9 670 aaKnown RBP21.05■□□□□ 0.96
RER1-202ENST00000378512 ADORA1P30542 326 aa21.04■□□□□ 0.96
RER1-202ENST00000378512 PHKA1P46020 1223 aa21.04■□□□□ 0.96
RER1-202ENST00000378512 TIMM10P62072 90 aa21.04■□□□□ 0.96
RER1-202ENST00000378512 VEZTQ9HBM0 779 aa21.04■□□□□ 0.96
RER1-202ENST00000378512 ZBTB40Q9NUA8 1239 aa21.04■□□□□ 0.96
RER1-202ENST00000378512 DDX19BQ9UMR2 479 aa21.04■□□□□ 0.96
RER1-202ENST00000378512 PDS5AQ29RF7 1337 aaKnown RBP21.04■□□□□ 0.96
RER1-202ENST00000378512 FRAT2O75474 233 aaPredicted RBP21.04■□□□□ 0.96
RER1-202ENST00000378512 RBM5P52756 815 aaKnown RBP eCLIP21.04■□□□□ 0.96
RER1-202ENST00000378512 CHAF1AQ13111 956 aaPredicted RBP21.04■□□□□ 0.96
RER1-202ENST00000378512 G3BP1Q13283 466 aaKnown RBP eCLIP21.04■□□□□ 0.96
RER1-202ENST00000378512 LDLRAD1Q5T700 205 aa21.04■□□□□ 0.96
RER1-202ENST00000378512 CCDC102BQ68D86 513 aa21.04■□□□□ 0.96
RER1-202ENST00000378512 WDR66Q8TBY9 1149 aa21.04■□□□□ 0.96
RER1-202ENST00000378512 GPR108Q9NPR9 543 aa21.04■□□□□ 0.96
RER1-202ENST00000378512 SALL1Q9NSC2 1324 aa21.03■□□□□ 0.96
RER1-202ENST00000378512 TBC1D8O95759 1140 aa21.03■□□□□ 0.96
RER1-202ENST00000378512 XAGE2Q96GT9 111 aa21.03■□□□□ 0.96
RER1-202ENST00000378512 CLMNQ96JQ2 1002 aa21.03■□□□□ 0.96
RER1-202ENST00000378512 GNL3LQ9NVN8 582 aaKnown RBP21.03■□□□□ 0.96
RER1-202ENST00000378512 COG6Q9Y2V7 657 aa21.03■□□□□ 0.96
RER1-202ENST00000378512 CRKP46108 304 aa21.02■□□□□ 0.96
RER1-202ENST00000378512 NBPF12Q5TAG4 269 aaPredicted RBP21.02■□□□□ 0.96
RER1-202ENST00000378512 ARMC9Q7Z3E5 817 aa21.02■□□□□ 0.96
RER1-202ENST00000378512 CDAN1Q8IWY9 1227 aa21.02■□□□□ 0.96
RER1-202ENST00000378512 DENND2AQ9ULE3 1009 aa21.02■□□□□ 0.96
RER1-202ENST00000378512 SPDYE2Q495Y8 402 aa21.01■□□□□ 0.95
RER1-202ENST00000378512 MYO1BO43795 1136 aa21■□□□□ 0.95
RER1-202ENST00000378512 C20orf194Q5TEA3 1177 aa21■□□□□ 0.95
RER1-202ENST00000378512 GOLGA6L2Q8N9W4 650 aaPredicted RBP21■□□□□ 0.95
RER1-202ENST00000378512 R3HDMLQ9H3Y0 253 aa21■□□□□ 0.95
RER1-202ENST00000378512 TDRD3Q9H7E2 651 aaKnown RBP21■□□□□ 0.95
RER1-202ENST00000378512 PPP2R3BQ9Y5P8 575 aa21■□□□□ 0.95
RER1-202ENST00000378512 MAST3O60307 1309 aa21■□□□□ 0.95
RER1-202ENST00000378512 SURF6O75683 361 aaKnown RBP20.99■□□□□ 0.95
RER1-202ENST00000378512 TM4SF4P48230 202 aa20.99■□□□□ 0.95
RER1-202ENST00000378512 RASGRF1Q13972 1273 aa20.99■□□□□ 0.95
RER1-202ENST00000378512 RASA3Q14644 834 aa20.99■□□□□ 0.95
RER1-202ENST00000378512 SPRYD7Q5W111 196 aa20.99■□□□□ 0.95
RER1-202ENST00000378512 HHIPL2Q6UWX4 724 aa20.99■□□□□ 0.95
RER1-202ENST00000378512 REM2Q8IYK8 340 aaPredicted RBP20.99■□□□□ 0.95
RER1-202ENST00000378512 ZDHHC15Q96MV8 337 aa20.99■□□□□ 0.95
RER1-202ENST00000378512 ZNF70Q9UC06 446 aaPredicted RBP20.99■□□□□ 0.95
RER1-202ENST00000378512 MYH2Q9UKX2 1941 aa20.99■□□□□ 0.95
RER1-202ENST00000378512 RPAP2Q8IXW5 612 aaPredicted RBP20.98■□□□□ 0.95
RER1-202ENST00000378512 TEKT1Q969V4 418 aa20.98■□□□□ 0.95
RER1-202ENST00000378512 CHMP4BQ9H444 224 aaKnown RBP20.98■□□□□ 0.95
RER1-202ENST00000378512 ARID4AP29374 1257 aaPredicted RBP20.97■□□□□ 0.95
RER1-202ENST00000378512 MAP3K11Q16584 847 aa20.97■□□□□ 0.95
RER1-202ENST00000378512 TNNI3KQ59H18 835 aa20.97■□□□□ 0.95
RER1-202ENST00000378512 APOBEC3HQ6NTF7 200 aaKnown RBP20.97■□□□□ 0.95
RER1-202ENST00000378512 SIRT2Q8IXJ6 389 aa20.97■□□□□ 0.95
RER1-202ENST00000378512 FPGT-TNNI3KV9GXZ4 949 aa20.97■□□□□ 0.95
RER1-202ENST00000378512 LAMB1P07942 1786 aa20.97■□□□□ 0.95
RER1-202ENST00000378512 PRDX5P30044 214 aa20.96■□□□□ 0.95
RER1-202ENST00000378512 ZNF296Q8WUU4 475 aaPredicted RBP20.96■□□□□ 0.95
RER1-202ENST00000378512 OTOFQ9HC10 1997 aa20.96■□□□□ 0.95
RER1-202ENST00000378512 TCP10L2B9ZVM9 353 aa20.95■□□□□ 0.95
RER1-202ENST00000378512 USP2O75604 605 aaPredicted RBP20.95■□□□□ 0.95
RER1-202ENST00000378512 GJA5P36382 358 aa20.95■□□□□ 0.95
RER1-202ENST00000378512 CACNB3P54284 484 aa20.95■□□□□ 0.95
RER1-202ENST00000378512 SLC10A4Q96EP9 437 aa20.95■□□□□ 0.95
RER1-202ENST00000378512 NEUROD6Q96NK8 337 aa20.95■□□□□ 0.95
RER1-202ENST00000378512 ZGPATQ8N5A5 531 aaKnown RBP20.95■□□□□ 0.94
RER1-202ENST00000378512 WNK4Q96J92 1243 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms