RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 DDIT3P35638 169 aa13.53□□□□□ -0.24
DDR1-227ENST00000376570 HMGN5P82970 282 aaKnown RBP13.53□□□□□ -0.24
DDR1-227ENST00000376570 SSRP1Q08945 709 aaKnown RBP13.53□□□□□ -0.24
DDR1-227ENST00000376570 NOC3LQ8WTT2 800 aaKnown RBP13.53□□□□□ -0.24
DDR1-227ENST00000376570 SETDB2Q96T68 719 aa13.53□□□□□ -0.24
DDR1-227ENST00000376570 ZHX3Q9H4I2 956 aa13.53□□□□□ -0.24
DDR1-227ENST00000376570 CEMIPQ8WUJ3 1361 aa13.53□□□□□ -0.24
DDR1-227ENST00000376570 MEGF6O75095 1541 aa13.52□□□□□ -0.24
DDR1-227ENST00000376570 H7C1W4 665 aa13.52□□□□□ -0.24
DDR1-227ENST00000376570 LETM1O95202 739 aaPredicted RBP13.52□□□□□ -0.24
DDR1-227ENST00000376570 NAA16Q6N069 864 aaPredicted RBP13.52□□□□□ -0.24
DDR1-227ENST00000376570 OLFM4Q6UX06 510 aa13.52□□□□□ -0.24
DDR1-227ENST00000376570 ZBTB38Q8NAP3 1195 aaPredicted RBP13.52□□□□□ -0.24
DDR1-227ENST00000376570 NOL7Q9UMY1 257 aaKnown RBP13.52□□□□□ -0.24
DDR1-227ENST00000376570 AOX1Q06278 1338 aa13.52□□□□□ -0.24
DDR1-227ENST00000376570 TECPR2O15040 1411 aa13.52□□□□□ -0.24
DDR1-227ENST00000376570 ERVV-2B6SEH9 535 aa13.52□□□□□ -0.25
DDR1-227ENST00000376570 SPTLC2O15270 562 aa13.52□□□□□ -0.25
DDR1-227ENST00000376570 USPL1Q5W0Q7 1092 aa13.52□□□□□ -0.25
DDR1-227ENST00000376570 GIGYF2Q6Y7W6 1299 aaKnown RBP13.52□□□□□ -0.25
DDR1-227ENST00000376570 TRMT44Q8IYL2 757 aaKnown RBP13.52□□□□□ -0.25
DDR1-227ENST00000376570 SPATA5Q8NB90 893 aa13.52□□□□□ -0.25
DDR1-227ENST00000376570 CARD10Q9BWT7 1032 aa13.52□□□□□ -0.25
DDR1-227ENST00000376570 CABP5Q9NP86 173 aa13.52□□□□□ -0.25
DDR1-227ENST00000376570 SALL3Q9BXA9 1300 aa13.52□□□□□ -0.25
DDR1-227ENST00000376570 PDE8AO60658 829 aa13.52□□□□□ -0.25
DDR1-227ENST00000376570 HMGB1P09429 215 aaKnown RBP13.52□□□□□ -0.25
DDR1-227ENST00000376570 SKIDA1Q1XH10 827 aa13.52□□□□□ -0.25
DDR1-227ENST00000376570 TRERF1Q96PN7 1200 aa13.52□□□□□ -0.25
DDR1-227ENST00000376570 MCM9Q9NXL9 1143 aa13.52□□□□□ -0.25
DDR1-227ENST00000376570 IFT172Q9UG01 1749 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 PTF1AQ7RTS3 328 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 GRAMD1CQ8IYS0 662 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 FAM200AQ8TCP9 573 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 ZNF622Q969S3 477 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDR1-227ENST00000376570 MAP7D2Q96T17 732 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 VPS54Q9P1Q0 977 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 PYCARDQ9ULZ3 195 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 MRVI1Q9Y6F6 885 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 CYP2E1P05181 493 aaPredicted RBP13.51□□□□□ -0.25
DDR1-227ENST00000376570 CDC25AP30304 524 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 ENOX2Q16206 610 aaKnown RBP13.51□□□□□ -0.25
DDR1-227ENST00000376570 DHX58Q96C10 678 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 TEX13AQ9BXU3 409 aaPredicted RBP13.51□□□□□ -0.25
DDR1-227ENST00000376570 CPVLQ9H3G5 476 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 AGLP35573 1532 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 ZNF174Q15697 407 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 MSL1Q68DK7 614 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 PDCL2Q8N4E4 241 aa13.51□□□□□ -0.25
DDR1-227ENST00000376570 NSUN7Q8NE18 718 aaKnown RBP13.51□□□□□ -0.25
DDR1-227ENST00000376570 V9GY48 417 aaPredicted RBP13.51□□□□□ -0.25
DDR1-227ENST00000376570 MAP3K15Q6ZN16 1313 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 SYKP43405 635 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 RTN1Q16799 776 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 ERFEQ4G0M1 354 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 BTBD18B2RXH4 712 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 RASGRF1Q13972 1273 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 LCORLQ8N3X6 602 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 IFNKQ9P0W0 207 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 KIF20BQ96Q89 1820 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 PDE8BO95263 885 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 TNNT1P13805 278 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 CASP1P29466 404 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 ZMYM1Q5SVZ6 1142 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 MRPS27Q92552 414 aaKnown RBP13.5□□□□□ -0.25
DDR1-227ENST00000376570 PGBD1Q96JS3 809 aa13.5□□□□□ -0.25
DDR1-227ENST00000376570 DDX19AQ9NUU7 478 aaKnown RBP13.5□□□□□ -0.25
DDR1-227ENST00000376570 MAGEB6P1A0A0J9YX57 407 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 RFX5P48382 616 aaPredicted RBP13.49□□□□□ -0.25
DDR1-227ENST00000376570 NLRP5P59047 1200 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 CHRNDQ07001 517 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 MTX1Q13505 466 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 C11orf57Q6ZUT1 292 aaPredicted RBP13.49□□□□□ -0.25
DDR1-227ENST00000376570 NLRP3Q96P20 1036 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 CDC5LQ99459 802 aaKnown RBP13.49□□□□□ -0.25
DDR1-227ENST00000376570 TMX4Q9H1E5 349 aaPredicted RBP13.49□□□□□ -0.25
DDR1-227ENST00000376570 HELLSQ9NRZ9 838 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 ZNF652Q9Y2D9 606 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 ZNF609O15014 1411 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 ERICH4A6NGS2 130 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 NR5A1Q13285 461 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 KRT40Q6A162 431 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 AK7Q96M32 723 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 PPP1R9BQ96SB3 815 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 NAT10Q9H0A0 1025 aaKnown RBP13.49□□□□□ -0.25
DDR1-227ENST00000376570 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 ANKARQ7Z5J8 1434 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 RPAP1Q9BWH6 1393 aaPredicted RBP13.49□□□□□ -0.25
DDR1-227ENST00000376570 USP17L12C9JPN9 530 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 USP17L21D6R901 530 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 GOLGA8HP0CJ92 632 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 NDUFA8P51970 172 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 PUM3Q15397 648 aaKnown RBP13.49□□□□□ -0.25
DDR1-227ENST00000376570 TBC1D10CQ8IV04 446 aa13.49□□□□□ -0.25
DDR1-227ENST00000376570 NMT2O60551 498 aa13.48□□□□□ -0.25
DDR1-227ENST00000376570 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
DDR1-227ENST00000376570 CCNL1Q9UK58 526 aaPredicted RBP13.48□□□□□ -0.25
DDR1-227ENST00000376570 RGPD8O14715 1765 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms