RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 HMGB1P09429 215 aaKnown RBP11.65□□□□□ -0.54
ZNF550-203ENST00000376230 USP5P45974 858 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 CTSWP56202 376 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 NLRP10Q86W26 655 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 APPBP2Q92624 585 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 SH3TC1Q8TE82 1336 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 H7C1W4 665 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 MTX1Q13505 466 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 CAVIN4Q5BKX8 364 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 AATFQ9NY61 560 aaKnown RBP eCLIP11.65□□□□□ -0.54
ZNF550-203ENST00000376230 MAPK8IP1Q9UQF2 711 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 PDE6AP16499 860 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 SUSD4Q5VX71 490 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 CNNM3Q8NE01 707 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 TTLL11Q8NHH1 800 aa11.65□□□□□ -0.54
ZNF550-203ENST00000376230 PCMTD1Q96MG8 357 aaPredicted RBP11.65□□□□□ -0.54
ZNF550-203ENST00000376230 SAP30BPQ9UHR5 308 aaKnown RBP11.65□□□□□ -0.54
ZNF550-203ENST00000376230 C6orf229H3BNL8 230 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 SPTLC2O15270 562 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 ST3GAL1Q11201 340 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 WTAPQ15007 396 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 DZIP1Q86YF9 867 aaKnown RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 ZSWIM4Q9H7M6 989 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 DDX19AQ9NUU7 478 aaKnown RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 GNL3LQ9NVN8 582 aaKnown RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 ERVV-2B6SEH9 535 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 EIF6P56537 245 aaKnown RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 DYNLL1P63167 89 aaKnown RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 SSRP1Q08945 709 aaKnown RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 ANKRD18AQ8IVF6 992 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 ZBTB38Q8NAP3 1195 aaPredicted RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 NSUN7Q8NE18 718 aaKnown RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 PPP1R1BQ9UD71 204 aaPredicted RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 RPAP1Q9BWH6 1393 aaPredicted RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 MEGF6O75095 1541 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 SMIM22K7EJ46 135 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 RIMBP2O15034 1052 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 ZSCAN20P17040 1043 aaPredicted RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 CRKLP46109 303 aaKnown RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 CCDC152Q4G0S7 254 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 OLFM4Q6UX06 510 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 GIGYF2Q6Y7W6 1299 aaKnown RBP11.64□□□□□ -0.55
ZNF550-203ENST00000376230 ANKARQ7Z5J8 1434 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 PGBD1Q96JS3 809 aa11.64□□□□□ -0.55
ZNF550-203ENST00000376230 TSPY2A6NKD2 308 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 RFX5P48382 616 aaPredicted RBP11.63□□□□□ -0.55
ZNF550-203ENST00000376230 PTPN14Q15678 1187 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 NOL10Q9BSC4 688 aaKnown RBP11.63□□□□□ -0.55
ZNF550-203ENST00000376230 CARD10Q9BWT7 1032 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 TEX13AQ9BXU3 409 aaPredicted RBP11.63□□□□□ -0.55
ZNF550-203ENST00000376230 TM6SF1Q9BZW5 370 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 SRCAPQ6ZRS2 3230 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 TPM3P06753 285 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 DMTNQ08495 405 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 ZMYM1Q5SVZ6 1142 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 CEP135Q66GS9 1140 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 SPATA5Q8NB90 893 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 MKNK2Q9HBH9 465 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 CABP5Q9NP86 173 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 HELLSQ9NRZ9 838 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 MRVI1Q9Y6F6 885 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 LOC102724428A0A0B4J2F2 783 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 PDE8AO60658 829 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 SYKP43405 635 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 RBM5P52756 815 aaKnown RBP eCLIP11.63□□□□□ -0.55
ZNF550-203ENST00000376230 SIK1P57059 783 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 C11orf57Q6ZUT1 292 aaPredicted RBP11.63□□□□□ -0.55
ZNF550-203ENST00000376230 TRMT44Q8IYL2 757 aaKnown RBP11.63□□□□□ -0.55
ZNF550-203ENST00000376230 MRPS27Q92552 414 aaKnown RBP11.63□□□□□ -0.55
ZNF550-203ENST00000376230 KIF20BQ96Q89 1820 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 ZNF609O15014 1411 aa11.63□□□□□ -0.55
ZNF550-203ENST00000376230 LMTK3Q96Q04 1460 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 SKILP12757 684 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 PICALMQ13492 652 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 NAA16Q6N069 864 aaPredicted RBP11.62□□□□□ -0.55
ZNF550-203ENST00000376230 NAT10Q9H0A0 1025 aaKnown RBP11.62□□□□□ -0.55
ZNF550-203ENST00000376230 IFNKQ9P0W0 207 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 SSH2Q76I76 1423 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 BTBD18B2RXH4 712 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 IKQ13123 557 aaPredicted RBP11.62□□□□□ -0.55
ZNF550-203ENST00000376230 GRAMD1CQ8IYS0 662 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 VPS54Q9P1Q0 977 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 MAP3K15Q6ZN16 1313 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 PDE8BO95263 885 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 NDUFA8P51970 172 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 RTN1Q16799 776 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 CACTINQ8WUQ7 758 aaKnown RBP11.62□□□□□ -0.55
ZNF550-203ENST00000376230 DHX58Q96C10 678 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 SETDB2Q96T68 719 aa11.62□□□□□ -0.55
ZNF550-203ENST00000376230 TCHHQ07283 1943 aa11.61□□□□□ -0.55
ZNF550-203ENST00000376230 CLSTN1O94985 981 aa11.61□□□□□ -0.55
ZNF550-203ENST00000376230 SSBP05455 408 aaKnown RBP eCLIP11.61□□□□□ -0.55
ZNF550-203ENST00000376230 RASGRF1Q13972 1273 aa11.61□□□□□ -0.55
ZNF550-203ENST00000376230 KRT40Q6A162 431 aa11.61□□□□□ -0.55
ZNF550-203ENST00000376230 CCDC87Q9NVE4 849 aa11.61□□□□□ -0.55
ZNF550-203ENST00000376230 MCM9Q9NXL9 1143 aa11.61□□□□□ -0.55
ZNF550-203ENST00000376230 V9GY48 417 aaPredicted RBP11.61□□□□□ -0.55
ZNF550-203ENST00000376230 ZBTB22O15209 634 aa11.61□□□□□ -0.55
ZNF550-203ENST00000376230 CDC25AP30304 524 aa11.61□□□□□ -0.55
ZNF550-203ENST00000376230 ZNF174Q15697 407 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms