RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 RGPD1P0DJD0 1748 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 PRDM1O75626 825 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 ARHGEF25Q86VW2 580 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 ANKLE2Q86XL3 938 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 RASSF8Q8NHQ8 419 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 CYP27B1O15528 508 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 WWC2Q6AWC2 1192 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 IFNL2Q8IZJ0 200 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 NOL10Q9BSC4 688 aaKnown RBP13.62□□□□□ -0.23
MCF2L-202ENST00000375597 RCOR1Q9UKL0 485 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 TBC1D2BQ9UPU7 963 aa13.62□□□□□ -0.23
MCF2L-202ENST00000375597 BAZ2BQ9UIF8 2168 aaKnown RBP13.62□□□□□ -0.23
MCF2L-202ENST00000375597 GRIN1Q05586 938 aa13.61□□□□□ -0.23
MCF2L-202ENST00000375597 ANO1Q5XXA6 986 aa13.61□□□□□ -0.23
MCF2L-202ENST00000375597 VPS37DQ86XT2 251 aa13.61□□□□□ -0.23
MCF2L-202ENST00000375597 MED23Q9ULK4 1368 aa13.61□□□□□ -0.23
MCF2L-202ENST00000375597 GOLGA8AA7E2F4 631 aa13.61□□□□□ -0.23
MCF2L-202ENST00000375597 IFIT3O14879 490 aaKnown RBP13.61□□□□□ -0.23
MCF2L-202ENST00000375597 TMEM67Q5HYA8 995 aa13.61□□□□□ -0.23
MCF2L-202ENST00000375597 PLIN2Q99541 437 aa13.61□□□□□ -0.23
MCF2L-202ENST00000375597 MTF1Q14872 753 aa13.61□□□□□ -0.23
MCF2L-202ENST00000375597 TMCO3Q6UWJ1 677 aa13.61□□□□□ -0.23
MCF2L-202ENST00000375597 LINC00301Q8NCQ3 95 aa13.61□□□□□ -0.23
MCF2L-202ENST00000375597 PRDM11Q9NQV5 511 aa13.61□□□□□ -0.23
MCF2L-202ENST00000375597 MROH7-TTC4A0A0A0MT08 1334 aa13.61□□□□□ -0.23
MCF2L-202ENST00000375597 PHKG2P15735 406 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 CLCN6P51797 869 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 NBPF11Q86T75 865 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-202ENST00000375597 GTPBP4Q9BZE4 634 aaKnown RBP13.6□□□□□ -0.23
MCF2L-202ENST00000375597 A0A0U1RQJ8 604 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 BTBD18B2RXH4 712 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 NBPF26B4DH59 902 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 POLR2DO15514 142 aaKnown RBP13.6□□□□□ -0.23
MCF2L-202ENST00000375597 EVCP57679 992 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 NBPF14Q5TI25 921 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 NBPF10Q6P3W6 841 aaKnown RBP13.6□□□□□ -0.23
MCF2L-202ENST00000375597 NBPF15Q8N660 670 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 ATRIPQ8WXE1 791 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 COPRSQ9NQ92 184 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-202ENST00000375597 CTAGE5O15320 804 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 CTIFO43310 598 aaKnown RBP13.6□□□□□ -0.23
MCF2L-202ENST00000375597 RHOXF2BP0C7M4 288 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 CCT6AP40227 531 aaKnown RBP13.6□□□□□ -0.23
MCF2L-202ENST00000375597 EVA1CP58658 441 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 FAM193AP78312 1265 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 NR5A1Q13285 461 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 KRT40Q6A162 431 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 FMR1NBQ8N0W7 255 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-202ENST00000375597 AIDAQ96BJ3 306 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 DHX58Q96C10 678 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 RHOXF2Q9BQY4 288 aa13.6□□□□□ -0.23
MCF2L-202ENST00000375597 DDX41Q9UJV9 622 aaKnown RBP13.6□□□□□ -0.23
MCF2L-202ENST00000375597 SMIM22K7EJ46 135 aa13.59□□□□□ -0.23
MCF2L-202ENST00000375597 EYA2O00167 538 aa13.59□□□□□ -0.23
MCF2L-202ENST00000375597 HOXB7P09629 217 aa13.59□□□□□ -0.23
MCF2L-202ENST00000375597 NCOA7Q8NI08 942 aa13.59□□□□□ -0.23
MCF2L-202ENST00000375597 PLEKHA4Q9H4M7 779 aa13.59□□□□□ -0.23
MCF2L-202ENST00000375597 TDO2P48775 406 aa13.59□□□□□ -0.23
MCF2L-202ENST00000375597 RBM6P78332 1123 aaKnown RBP13.59□□□□□ -0.23
MCF2L-202ENST00000375597 IFIT5Q13325 482 aaKnown RBP13.59□□□□□ -0.23
MCF2L-202ENST00000375597 DHX8Q14562 1220 aaKnown RBP13.59□□□□□ -0.23
MCF2L-202ENST00000375597 PCDHA5Q9Y5H7 936 aa13.59□□□□□ -0.23
MCF2L-202ENST00000375597 CEMIPQ8WUJ3 1361 aa13.59□□□□□ -0.23
MCF2L-202ENST00000375597 PRKAB2O43741 272 aa13.58□□□□□ -0.23
MCF2L-202ENST00000375597 IARSP41252 1262 aaKnown RBP13.58□□□□□ -0.23
MCF2L-202ENST00000375597 RFX5P48382 616 aaPredicted RBP13.58□□□□□ -0.23
MCF2L-202ENST00000375597 CPLX2Q6PUV4 134 aaKnown RBP13.58□□□□□ -0.23
MCF2L-202ENST00000375597 USP49Q70CQ1 688 aa13.58□□□□□ -0.23
MCF2L-202ENST00000375597 MRFAP1L1Q96HT8 127 aa13.58□□□□□ -0.23
MCF2L-202ENST00000375597 ARMT1Q9H993 441 aa13.58□□□□□ -0.23
MCF2L-202ENST00000375597 HMGB1P09429 215 aaKnown RBP13.58□□□□□ -0.24
MCF2L-202ENST00000375597 ATF3P18847 181 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 DNA2P51530 1060 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 ATG9AQ7Z3C6 839 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 CCDC24Q8N4L8 307 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 FBXO18Q8NFZ0 1043 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 CDC27P30260 824 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 CDC25AP30304 524 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 GUCY1A2P33402 732 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 LMAN1P49257 510 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 ADALQ6DHV7 355 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 NAA16Q6N069 864 aaPredicted RBP13.58□□□□□ -0.24
MCF2L-202ENST00000375597 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.58□□□□□ -0.24
MCF2L-202ENST00000375597 ERO1AQ96HE7 468 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
MCF2L-202ENST00000375597 PLEKHG1Q9ULL1 1385 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 FMN2Q9NZ56 1722 aa13.58□□□□□ -0.24
MCF2L-202ENST00000375597 ZMYM1Q5SVZ6 1142 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 CYB5R4Q7L1T6 521 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 UIMC1Q96RL1 719 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 FAM205CA6NFA0 338 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 DHX16O60231 1041 aaKnown RBP13.57□□□□□ -0.24
MCF2L-202ENST00000375597 MRPS25P82663 173 aaKnown RBP13.57□□□□□ -0.24
MCF2L-202ENST00000375597 PDE4BQ07343 736 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 TBC1D10CQ8IV04 446 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 KCNG4Q8TDN1 519 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 WDR24Q96S15 920 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 SAMSN1Q9NSI8 373 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms