RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 RAD51AP2Q09MP3 1159 aa16.63■□□□□ 0.25
NOTCH4-201ENST00000375023 LDHBP07195 334 aaKnown RBP16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 KCNG4Q8TDN1 519 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 ZNF594Q96JF6 807 aaPredicted RBP16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 SPTLC2O15270 562 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 TCP10Q12799 353 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 FAM89AQ96GI7 184 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 IFNKQ9P0W0 207 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 F13A1P00488 732 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 LONRF3Q496Y0 759 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 C6orf163Q5TEZ5 329 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 KRT79Q5XKE5 535 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 MRPL50Q8N5N7 158 aaKnown RBP16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 RABEP2Q9H5N1 569 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 TBC1D7Q9P0N9 293 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 CEP83Q9Y592 693 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 A0A1B0GVL5 298 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 NEMFO60524 1076 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 CCDC172P0C7W6 258 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 TRIM75PA6NK02 468 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 TMCO4Q5TGY1 634 aa16.62■□□□□ 0.25
NOTCH4-201ENST00000375023 POTEB2H3BUK9 544 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 FAM182BQ5T319 152 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 NEK11Q8NG66 645 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 CCDC169A6NNP5 214 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 MBD4O95243 580 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 PRIM1P49642 420 aaKnown RBP16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 PPP1R7Q15435 360 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 MYCLP12524 364 aaPredicted RBP16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 CREB3L3Q68CJ9 461 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 KSR2Q6VAB6 950 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 CLSTN2Q9H4D0 955 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 PLEKHA4Q9H4M7 779 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 ARMT1Q9H993 441 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 CTAGE9A4FU28 777 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 B4E1Z4 1266 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 GADL1Q6ZQY3 521 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 FAM200AQ8TCP9 573 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 RASAL2Q9UJF2 1139 aa16.61■□□□□ 0.25
NOTCH4-201ENST00000375023 PTPDC1A2A3K4 754 aa16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 H0YIN7 160 aa16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 USH1GQ495M9 461 aa16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 hCG_1642624A0A1W2PR95 340 aa16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 TAF5LO75529 589 aa16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 TIMM10P62072 90 aa16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 PYM1Q9BRP8 204 aaKnown RBP16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 RNF113AO15541 343 aaKnown RBP16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 MNAT1P51948 309 aa16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 BIRC3Q13489 604 aa16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 CCNT1O60563 726 aaKnown RBP16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 BMS1Q14692 1282 aaKnown RBP16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 CTAGE1Q96RT6 745 aa16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 ATP6V0A2Q9Y487 856 aa16.6■□□□□ 0.25
NOTCH4-201ENST00000375023 PRDM1O75626 825 aa16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 TACC1O75410 805 aa16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 IL15P40933 162 aaPredicted RBP16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 NOLC1Q14978 699 aaKnown RBP eCLIP16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 SYT10Q6XYQ8 523 aa16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 UBLCP1Q8WVY7 318 aaPredicted RBP16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 RNF34Q969K3 372 aa16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 MAK16Q9BXY0 300 aaKnown RBP16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 VPS18Q9P253 973 aa16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 DTHD1Q6ZMT9 781 aa16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 TPTE2Q6XPS3 522 aa16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 CCDC42Q96M95 316 aa16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 ATP8B2P98198 1209 aa16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 TIGD1Q96MW7 591 aa16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 HAUS7Q99871 368 aa16.59■□□□□ 0.25
NOTCH4-201ENST00000375023 UFL1O94874 794 aa16.58■□□□□ 0.25
NOTCH4-201ENST00000375023 IL2RBP14784 551 aa16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 TYRO3Q06418 890 aa16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 AKAP4Q5JQC9 854 aa16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 ZFYP08048 801 aaPredicted RBP16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 MICALL1Q8N3F8 863 aa16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 SREK1Q8WXA9 508 aaKnown RBP16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 ODF2LQ9ULJ1 636 aa16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 GOLGA6L9A6NEM1 432 aa16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 PARP1P09874 1014 aaKnown RBP16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 KIF5AQ12840 1032 aa16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 VPS16Q9H269 839 aa16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 NCOA5Q9HCD5 579 aaKnown RBP16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 AGTPBP1Q9UPW5 1226 aa16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 GEN1Q17RS7 908 aa16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 TMTC2Q8N394 836 aa16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 EHBP1Q8NDI1 1231 aa16.58■□□□□ 0.24
NOTCH4-201ENST00000375023 GABPAQ06546 454 aa16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 IFRD2Q12894 506 aaPredicted RBP16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 PLVAPQ9BX97 442 aa16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 CALCOCO1Q9P1Z2 691 aa16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 USP37Q86T82 979 aa16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 RBM17Q96I25 401 aaKnown RBP16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 TRIM6Q9C030 488 aaPredicted RBP16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 NYXQ9GZU5 481 aa16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 TXNDC16Q9P2K2 825 aa16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 KLHL40Q2TBA0 621 aa16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 PIK3AP1Q6ZUJ8 805 aa16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.57■□□□□ 0.24
NOTCH4-201ENST00000375023 KSR1Q8IVT5 923 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms