RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 H3BQV1 296 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 CTAGE5O15320 804 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 GPAA1O43292 621 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 ZPR1O75312 459 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 FGAP02671 866 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 ZAP70P43403 619 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 PKP1Q13835 747 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 SART3Q15020 963 aaKnown RBP10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 IFFO2Q5TF58 517 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 BRAPQ7Z569 592 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 WASF1Q92558 559 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 OSBP2Q969R2 916 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 AIDAQ96BJ3 306 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 NLRP3Q96P20 1036 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 NOL10Q9BSC4 688 aaKnown RBP10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 GZF1Q9H116 711 aaPredicted RBP10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 DDX19AQ9NUU7 478 aaKnown RBP10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 DENND2AQ9ULE3 1009 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 ZNF804BA4D1E1 1349 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 BCORQ6W2J9 1755 aa10.24□□□□□ -0.77
SNRNP40-202ENST00000373720 MCAMP43121 646 aa10.23□□□□□ -0.77
SNRNP40-202ENST00000373720 SLC27A3Q5K4L6 730 aa10.23□□□□□ -0.77
SNRNP40-202ENST00000373720 SPTY2D1Q68D10 685 aaPredicted RBP10.23□□□□□ -0.77
SNRNP40-202ENST00000373720 TMC4Q7Z404 712 aa10.23□□□□□ -0.77
SNRNP40-202ENST00000373720 GPT2Q8TD30 523 aa10.23□□□□□ -0.77
SNRNP40-202ENST00000373720 BRF1Q92994 677 aa10.23□□□□□ -0.77
SNRNP40-202ENST00000373720 SETDB2Q96T68 719 aa10.23□□□□□ -0.77
SNRNP40-202ENST00000373720 RTCBQ9Y3I0 505 aaKnown RBP10.23□□□□□ -0.77
SNRNP40-202ENST00000373720 NHSQ6T4R5 1651 aa10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 TPM3P06753 285 aa10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 GTF2E1P29083 439 aaPredicted RBP10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 PDIA3P30101 505 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 ITPK1Q13572 414 aa10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 SYNE3Q6ZMZ3 975 aa10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 SGMS1Q86VZ5 419 aa10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 FAM177A1Q8N128 213 aaPredicted RBP10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 MARVELD3Q96A59 401 aa10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 EDC3Q96F86 508 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 STRBPQ96SI9 672 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 TSPY26PQ9H489 355 aa10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 ANAPC4Q9UJX5 808 aa10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 USP21Q9UK80 565 aa10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 TRPC5Q9UL62 973 aaPredicted RBP10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 ANGEL1Q9UNK9 670 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 NID2Q14112 1375 aa10.22□□□□□ -0.77
SNRNP40-202ENST00000373720 TCRBV5S4A2TA0A5A2 114 aa10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 VPS37CA5D8V6 355 aaPredicted RBP10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 NUTM2BA6NNL0 878 aaPredicted RBP10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 NUTM2EB1AL46 878 aaPredicted RBP10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 CPLX1O14810 134 aa10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 PDE6AP16499 860 aa10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 ADORA1P30542 326 aa10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 MKRN3Q13064 507 aaKnown RBP10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 DHX8Q14562 1220 aaKnown RBP10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 CCDC178Q5BJE1 867 aa10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 NOL8Q76FK4 1167 aaKnown RBP10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 NUTM2AQ8IVF1 878 aaPredicted RBP10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 MB21D2Q8IYB1 491 aaPredicted RBP10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 SPATA32Q96LK8 384 aa10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 SEC62Q99442 399 aaKnown RBP10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 TAOK2Q9UL54 1235 aa10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 LEMD3Q9Y2U8 911 aa10.21□□□□□ -0.77
SNRNP40-202ENST00000373720 SALL1Q9NSC2 1324 aa10.21□□□□□ -0.78
SNRNP40-202ENST00000373720 MYH7P12883 1935 aa10.21□□□□□ -0.78
SNRNP40-202ENST00000373720 ERICH2A1L162 156 aa10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 M0R2C6 588 aa10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 IDH1O75874 414 aaKnown RBP10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 SLC3A2P08195 630 aaKnown RBP10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 CCDC192P0DO97 292 aa10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 RPS8P62241 208 aaKnown RBP10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 SCN7AQ01118 1682 aa10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 SCRN1Q12765 414 aa10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 FAM98CQ17RN3 349 aaKnown RBP10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 C15orf52Q6ZUT6 534 aaKnown RBP10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 DDX60Q8IY21 1712 aaKnown RBP10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 NSUN7Q8NE18 718 aaKnown RBP10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 PDLIM2Q96JY6 352 aa10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 GJD4Q96KN9 370 aaPredicted RBP10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 BRIP1Q9BX63 1249 aa10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 NAPBQ9H115 298 aa10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 ZNF532Q9HCE3 1301 aa10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 STK36Q9NRP7 1315 aa10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 TMEM63CQ9P1W3 806 aa10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 RCOR1Q9UKL0 485 aa10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 MORC2Q9Y6X9 1032 aaPredicted RBP10.2□□□□□ -0.78
SNRNP40-202ENST00000373720 AKAP11Q9UKA4 1901 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 DUOX1Q9NRD9 1551 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 PRC1O43663 620 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 LARGE1O95461 756 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 CALM1P0DP23 149 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 CALM2P0DP24 149 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 CALM3P0DP25 149 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 CPA1P15085 419 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 CHRNDQ07001 517 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 MMRN1Q13201 1228 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 TRAPPC3LQ5T215 181 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 CCDC129Q6ZRS4 1044 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 MFSD6Q6ZSS7 791 aa10.19□□□□□ -0.78
SNRNP40-202ENST00000373720 C3orf67Q6ZVT6 689 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms