RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 MORC2Q9Y6X9 1032 aaPredicted RBP11.58□□□□□ -0.56
KDM4A-201ENST00000372396 C6orf229H3BNL8 230 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 PPP2R5AQ15172 486 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 CNBD1Q8NA66 436 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 KIF18AQ8NI77 898 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 CCDC47Q96A33 483 aaKnown RBP11.57□□□□□ -0.56
KDM4A-201ENST00000372396 DSCC1Q9BVC3 393 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 ZSCAN16Q9H4T2 348 aaPredicted RBP11.57□□□□□ -0.56
KDM4A-201ENST00000372396 SLC4A4Q9Y6R1 1079 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 MYO1CO00159 1063 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 RAD21O60216 631 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 LIG1P18858 919 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 FAM43BQ6ZT52 329 aaPredicted RBP11.57□□□□□ -0.56
KDM4A-201ENST00000372396 ZNF804AQ7Z570 1209 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 TMTC2Q8N394 836 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 ANKRD7Q92527 254 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 TNMDQ9H2S6 317 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 DBNLQ9UJU6 430 aaKnown RBP11.57□□□□□ -0.56
KDM4A-201ENST00000372396 PIK3C2AO00443 1686 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 MEGF6O75095 1541 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 POLR3DP05423 398 aaPredicted RBP11.57□□□□□ -0.56
KDM4A-201ENST00000372396 CCT2P78371 535 aaKnown RBP11.57□□□□□ -0.56
KDM4A-201ENST00000372396 LRRC24Q50LG9 513 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 NECAB1Q8N987 351 aa11.57□□□□□ -0.56
KDM4A-201ENST00000372396 SASH1O94885 1247 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 EGFL6Q8IUX8 553 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 PI4K2BQ8TCG2 481 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 NUP62CLQ9H1M0 184 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 PALLDQ8WX93 1383 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 TMCO3Q6UWJ1 677 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 MAGEB6Q8N7X4 407 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 GTF3C6Q969F1 213 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 SUFUQ9UMX1 484 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 SETD1AO15047 1707 aaKnown RBP11.56□□□□□ -0.56
KDM4A-201ENST00000372396 KDM4AO75164 1064 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 PDE4BQ07343 736 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 ZSCAN26Q16670 478 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 NBPF20Q3BBV1 942 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 CCDC183Q5T5S1 534 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 SYT10Q6XYQ8 523 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 TCEANC2Q96MN5 208 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 MKNK2Q9HBH9 465 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 MAGEB6P1A0A0J9YX57 407 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 KLF18A0A0U1RQI7 1052 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 RANBP6O60518 1105 aaKnown RBP11.56□□□□□ -0.56
KDM4A-201ENST00000372396 IVLP07476 585 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 METAP2P50579 478 aaKnown RBP eCLIP11.56□□□□□ -0.56
KDM4A-201ENST00000372396 SYCP1Q15431 976 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 CXorf56Q9H5V9 222 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 JCADQ9P266 1359 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 ZNF142P52746 1687 aaPredicted RBP11.56□□□□□ -0.56
KDM4A-201ENST00000372396 TOPAZ1Q8N9V7 1692 aa11.56□□□□□ -0.56
KDM4A-201ENST00000372396 PRC1O43663 620 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 SSRP1Q08945 709 aaKnown RBP11.55□□□□□ -0.56
KDM4A-201ENST00000372396 TRIM28Q13263 835 aaKnown RBP11.55□□□□□ -0.56
KDM4A-201ENST00000372396 NEK11Q8NG66 645 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 CTCFLQ8NI51 663 aaPredicted RBP11.55□□□□□ -0.56
KDM4A-201ENST00000372396 NBPF26B4DH59 902 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 TPM1P09493 284 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 NBPF14Q5TI25 921 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 NBPF10Q6P3W6 841 aaKnown RBP11.55□□□□□ -0.56
KDM4A-201ENST00000372396 CCDC129Q6ZRS4 1044 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 CATIPQ7Z7H3 387 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 NBPF15Q8N660 670 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 ISCA1Q9BUE6 129 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 LSG1Q9H089 658 aaKnown RBP11.55□□□□□ -0.56
KDM4A-201ENST00000372396 ORC3Q9UBD5 711 aaPredicted RBP11.55□□□□□ -0.56
KDM4A-201ENST00000372396 PXDNQ92626 1479 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 CDHR2Q9BYE9 1310 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 LMAN1P49257 510 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 BIRC2Q13490 618 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 E2F4Q16254 413 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 ESR2Q92731 530 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 RBM17Q96I25 401 aaKnown RBP11.55□□□□□ -0.56
KDM4A-201ENST00000372396 GREM2Q9H772 168 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 IQSEC3Q9UPP2 1182 aaPredicted RBP11.55□□□□□ -0.56
KDM4A-201ENST00000372396 SLIT3O75094 1523 aa11.55□□□□□ -0.56
KDM4A-201ENST00000372396 F13A1P00488 732 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 CYP19A1P11511 503 aaPredicted RBP11.54□□□□□ -0.56
KDM4A-201ENST00000372396 ZAP70P43403 619 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 DONSONQ9NYP3 566 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 TFCP2L1Q9NZI6 479 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 MTMR7Q9Y216 660 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 A0A0D9SFI3 127 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 IARSP41252 1262 aaKnown RBP11.54□□□□□ -0.56
KDM4A-201ENST00000372396 UBE2HP62256 183 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 ZNF444Q8N0Y2 327 aaPredicted RBP11.54□□□□□ -0.56
KDM4A-201ENST00000372396 PPM1EQ8WY54 764 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 NCBP1Q09161 790 aaKnown RBP11.54□□□□□ -0.56
KDM4A-201ENST00000372396 EPHA10Q5JZY3 1008 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 OLFM4Q6UX06 510 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 SPATA5Q8NB90 893 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 TLR7Q9NYK1 1049 aaKnown RBP11.54□□□□□ -0.56
KDM4A-201ENST00000372396 CHD2O14647 1828 aaKnown RBP11.54□□□□□ -0.56
KDM4A-201ENST00000372396 UTYO14607 1347 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 GPAA1O43292 621 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 PDE8BO95263 885 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 CCDC178Q5BJE1 867 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 LRRC2Q9BYS8 371 aa11.54□□□□□ -0.56
KDM4A-201ENST00000372396 CEP131Q9UPN4 1083 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms