RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 GNAI2P04899 355 aa18.88■□□□□ 0.61
SS18L1-202ENST00000370848 HIBADHP31937 336 aaKnown RBP18.88■□□□□ 0.61
SS18L1-202ENST00000370848 SPDYE2Q495Y8 402 aa18.88■□□□□ 0.61
SS18L1-202ENST00000370848 FBXO33Q7Z6M2 555 aa18.88■□□□□ 0.61
SS18L1-202ENST00000370848 SIL1Q9H173 461 aa18.88■□□□□ 0.61
SS18L1-202ENST00000370848 ANGEL1Q9UNK9 670 aaKnown RBP18.88■□□□□ 0.61
SS18L1-202ENST00000370848 MANSC4A6NHS7 340 aaPredicted RBP18.87■□□□□ 0.61
SS18L1-202ENST00000370848 GPR25O00155 361 aa18.87■□□□□ 0.61
SS18L1-202ENST00000370848 ZBTB7BO15156 539 aaPredicted RBP18.87■□□□□ 0.61
SS18L1-202ENST00000370848 PPP1R12BO60237 982 aaPredicted RBP18.87■□□□□ 0.61
SS18L1-202ENST00000370848 ALDH1A1P00352 501 aa18.87■□□□□ 0.61
SS18L1-202ENST00000370848 SUPT20HL1Q3ZLR7 823 aa18.87■□□□□ 0.61
SS18L1-202ENST00000370848 METTL24Q5JXM2 366 aa18.87■□□□□ 0.61
SS18L1-202ENST00000370848 MFSD14BQ5SR56 506 aa18.87■□□□□ 0.61
SS18L1-202ENST00000370848 C20orf194Q5TEA3 1177 aa18.87■□□□□ 0.61
SS18L1-202ENST00000370848 EYA2O00167 538 aa18.86■□□□□ 0.61
SS18L1-202ENST00000370848 SRGAP3O43295 1099 aa18.86■□□□□ 0.61
SS18L1-202ENST00000370848 TBC1D8O95759 1140 aa18.86■□□□□ 0.61
SS18L1-202ENST00000370848 GYG1P46976 350 aa18.86■□□□□ 0.61
SS18L1-202ENST00000370848 HDLBPQ00341 1268 aaKnown RBP18.86■□□□□ 0.61
SS18L1-202ENST00000370848 TNFAIP1Q13829 316 aa18.86■□□□□ 0.61
SS18L1-202ENST00000370848 ATG9AQ7Z3C6 839 aa18.86■□□□□ 0.61
SS18L1-202ENST00000370848 HDAC5Q9UQL6 1122 aa18.86■□□□□ 0.61
SS18L1-202ENST00000370848 PNMA6EA0A0J9YXQ4 647 aa18.85■□□□□ 0.61
SS18L1-202ENST00000370848 TESPA1A2RU30 521 aaPredicted RBP18.85■□□□□ 0.61
SS18L1-202ENST00000370848 PDE8BO95263 885 aa18.85■□□□□ 0.61
SS18L1-202ENST00000370848 MTX1Q13505 466 aa18.85■□□□□ 0.61
SS18L1-202ENST00000370848 WNK4Q96J92 1243 aa18.85■□□□□ 0.61
SS18L1-202ENST00000370848 TEPSINQ96N21 525 aa18.85■□□□□ 0.61
SS18L1-202ENST00000370848 MRIQ9BWK5 157 aa18.85■□□□□ 0.61
SS18L1-202ENST00000370848 COG6Q9Y2V7 657 aa18.85■□□□□ 0.61
SS18L1-202ENST00000370848 CLRN2A0PK11 232 aa18.84■□□□□ 0.61
SS18L1-202ENST00000370848 F8W031 263 aaPredicted RBP18.84■□□□□ 0.61
SS18L1-202ENST00000370848 ZBTB22O15209 634 aa18.84■□□□□ 0.61
SS18L1-202ENST00000370848 USP2O75604 605 aaPredicted RBP18.84■□□□□ 0.61
SS18L1-202ENST00000370848 FGFR2P21802 821 aa18.84■□□□□ 0.61
SS18L1-202ENST00000370848 RASA3Q14644 834 aa18.84■□□□□ 0.61
SS18L1-202ENST00000370848 NBPF12Q5TAG4 269 aaPredicted RBP18.84■□□□□ 0.61
SS18L1-202ENST00000370848 TTF2Q9UNY4 1162 aaKnown RBP18.84■□□□□ 0.61
SS18L1-202ENST00000370848 HPS5Q9UPZ3 1129 aa18.84■□□□□ 0.61
SS18L1-202ENST00000370848 PDE4DIPQ5VU43 2346 aa18.84■□□□□ 0.61
SS18L1-202ENST00000370848 PRKG1Q13976 671 aa18.83■□□□□ 0.6
SS18L1-202ENST00000370848 MVPQ14764 893 aaKnown RBP18.83■□□□□ 0.6
SS18L1-202ENST00000370848 IFNL1Q8IU54 200 aa18.83■□□□□ 0.6
SS18L1-202ENST00000370848 ANKRD13AQ8IZ07 590 aa18.83■□□□□ 0.6
SS18L1-202ENST00000370848 TBC1D22AQ8WUA7 517 aa18.83■□□□□ 0.6
SS18L1-202ENST00000370848 SLC10A4Q96EP9 437 aa18.83■□□□□ 0.6
SS18L1-202ENST00000370848 CLMNQ96JQ2 1002 aa18.83■□□□□ 0.6
SS18L1-202ENST00000370848 COPRSQ9NQ92 184 aa18.83■□□□□ 0.6
SS18L1-202ENST00000370848 ZNF70Q9UC06 446 aaPredicted RBP18.83■□□□□ 0.6
SS18L1-202ENST00000370848 FZD1Q9UP38 647 aa18.83■□□□□ 0.6
SS18L1-202ENST00000370848 JAG2Q9Y219 1238 aa18.83■□□□□ 0.6
SS18L1-202ENST00000370848 SUGT1Q9Y2Z0 365 aa18.83■□□□□ 0.6
SS18L1-202ENST00000370848 IREB2P48200 963 aaKnown RBP18.82■□□□□ 0.6
SS18L1-202ENST00000370848 FBXO46Q6PJ61 603 aaPredicted RBP18.82■□□□□ 0.6
SS18L1-202ENST00000370848 R3HDMLQ9H3Y0 253 aa18.82■□□□□ 0.6
SS18L1-202ENST00000370848 RPAP1Q9BWH6 1393 aaPredicted RBP18.81■□□□□ 0.6
SS18L1-202ENST00000370848 IGF2BP3O00425 579 aaKnown RBP eCLIP18.81■□□□□ 0.6
SS18L1-202ENST00000370848 FKTNO75072 461 aa18.81■□□□□ 0.6
SS18L1-202ENST00000370848 CIAO1O76071 339 aa18.81■□□□□ 0.6
SS18L1-202ENST00000370848 SLC34A2O95436 690 aa18.81■□□□□ 0.6
SS18L1-202ENST00000370848 GJA5P36382 358 aa18.81■□□□□ 0.6
SS18L1-202ENST00000370848 CRKP46108 304 aa18.81■□□□□ 0.6
SS18L1-202ENST00000370848 FKBP1CQ5VVH2 108 aa18.81■□□□□ 0.6
SS18L1-202ENST00000370848 VEZTQ9HBM0 779 aa18.81■□□□□ 0.6
SS18L1-202ENST00000370848 FBXO3Q9UK99 471 aa18.81■□□□□ 0.6
SS18L1-202ENST00000370848 MYH13Q9UKX3 1938 aa18.8■□□□□ 0.6
SS18L1-202ENST00000370848 MS4A1P11836 297 aa18.8■□□□□ 0.6
SS18L1-202ENST00000370848 MKRN3Q13064 507 aaKnown RBP18.8■□□□□ 0.6
SS18L1-202ENST00000370848 GRIK5Q16478 980 aa18.8■□□□□ 0.6
SS18L1-202ENST00000370848 CAVIN4Q5BKX8 364 aa18.8■□□□□ 0.6
SS18L1-202ENST00000370848 TDRD3Q9H7E2 651 aaKnown RBP18.8■□□□□ 0.6
SS18L1-202ENST00000370848 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.8■□□□□ 0.6
SS18L1-202ENST00000370848 CENPFP49454 3210 aa18.8■□□□□ 0.6
SS18L1-202ENST00000370848 RBBP6Q7Z6E9 1792 aaKnown RBP18.8■□□□□ 0.6
SS18L1-202ENST00000370848 IL15P40933 162 aaPredicted RBP18.79■□□□□ 0.6
SS18L1-202ENST00000370848 RBM5P52756 815 aaKnown RBP eCLIP18.79■□□□□ 0.65e-10■■□□□ 14.1
SS18L1-202ENST00000370848 ATP8B2P98198 1209 aa18.79■□□□□ 0.6
SS18L1-202ENST00000370848 POLA2Q14181 598 aa18.79■□□□□ 0.6
SS18L1-202ENST00000370848 PUM3Q15397 648 aaKnown RBP18.79■□□□□ 0.6
SS18L1-202ENST00000370848 ZDHHC15Q96MV8 337 aa18.79■□□□□ 0.6
SS18L1-202ENST00000370848 CEP85Q6P2H3 762 aa18.78■□□□□ 0.6
SS18L1-202ENST00000370848 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.78■□□□□ 0.6
SS18L1-202ENST00000370848 FAM83AQ86UY5 434 aa18.78■□□□□ 0.6
SS18L1-202ENST00000370848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.78■□□□□ 0.6
SS18L1-202ENST00000370848 MS4A4AQ96JQ5 239 aa18.78■□□□□ 0.6
SS18L1-202ENST00000370848 IQSEC3Q9UPP2 1182 aaPredicted RBP18.78■□□□□ 0.6
SS18L1-202ENST00000370848 MAST3O60307 1309 aa18.77■□□□□ 0.6
SS18L1-202ENST00000370848 TNNI2P48788 182 aa18.77■□□□□ 0.6
SS18L1-202ENST00000370848 BCAMP50895 628 aa18.77■□□□□ 0.6
SS18L1-202ENST00000370848 SOX10P56693 466 aa18.77■□□□□ 0.6
SS18L1-202ENST00000370848 CDAN1Q8IWY9 1227 aa18.77■□□□□ 0.6
SS18L1-202ENST00000370848 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.77■□□□□ 0.6
SS18L1-202ENST00000370848 SSH3Q8TE77 659 aa18.77■□□□□ 0.6
SS18L1-202ENST00000370848 CEP126Q9P2H0 1117 aa18.77■□□□□ 0.6
SS18L1-202ENST00000370848 DDX19BQ9UMR2 479 aa18.77■□□□□ 0.6
SS18L1-202ENST00000370848 BRCA2P51587 3418 aa18.77■□□□□ 0.59
SS18L1-202ENST00000370848 RRP1P56182 461 aaKnown RBP18.76■□□□□ 0.59
SS18L1-202ENST00000370848 TFCP2Q12800 502 aa18.76■□□□□ 0.59
SS18L1-202ENST00000370848 PDE3AQ14432 1141 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms