RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ARMC9Q7Z3E5 817 aa18.49■□□□□ 0.55
LMO4-201ENST00000370542 SSC5DA1L4H1 1573 aa18.48■□□□□ 0.55
LMO4-201ENST00000370542 POTEFA5A3E0 1075 aa18.48■□□□□ 0.55
LMO4-201ENST00000370542 TBC1D8O95759 1140 aa18.48■□□□□ 0.55
LMO4-201ENST00000370542 GYG1P46976 350 aa18.48■□□□□ 0.55
LMO4-201ENST00000370542 LRRC24Q50LG9 513 aa18.48■□□□□ 0.55
LMO4-201ENST00000370542 CFHR5Q9BXR6 569 aa18.48■□□□□ 0.55
LMO4-201ENST00000370542 DAXXQ9UER7 740 aaPredicted RBP18.48■□□□□ 0.55
LMO4-201ENST00000370542 SERPINA10Q9UK55 444 aa18.48■□□□□ 0.55
LMO4-201ENST00000370542 AOX1Q06278 1338 aa18.48■□□□□ 0.55
LMO4-201ENST00000370542 KIF16BQ96L93 1317 aa18.48■□□□□ 0.55
LMO4-201ENST00000370542 PDE8BO95263 885 aa18.47■□□□□ 0.55
LMO4-201ENST00000370542 RFX5P48382 616 aaPredicted RBP18.47■□□□□ 0.55
LMO4-201ENST00000370542 GSE1Q14687 1217 aa18.47■□□□□ 0.55
LMO4-201ENST00000370542 MFSD14BQ5SR56 506 aa18.47■□□□□ 0.55
LMO4-201ENST00000370542 SLC17A8Q8NDX2 589 aa18.47■□□□□ 0.55
LMO4-201ENST00000370542 ARAP2Q8WZ64 1704 aa18.46■□□□□ 0.55
LMO4-201ENST00000370542 F8W031 263 aaPredicted RBP18.46■□□□□ 0.55
LMO4-201ENST00000370542 GPR25O00155 361 aa18.46■□□□□ 0.55
LMO4-201ENST00000370542 MYO1BO43795 1136 aa18.46■□□□□ 0.55
LMO4-201ENST00000370542 FGFR2P21802 821 aa18.46■□□□□ 0.55
LMO4-201ENST00000370542 INTS3Q68E01 1043 aaKnown RBP18.46■□□□□ 0.55
LMO4-201ENST00000370542 EXOC6Q8TAG9 804 aa18.46■□□□□ 0.55
LMO4-201ENST00000370542 JAG2Q9Y219 1238 aa18.46■□□□□ 0.55
LMO4-201ENST00000370542 LAMB1P07942 1786 aa18.45■□□□□ 0.54
LMO4-201ENST00000370542 TTLL12Q14166 644 aaPredicted RBP18.45■□□□□ 0.54
LMO4-201ENST00000370542 SPDYE2Q495Y8 402 aa18.45■□□□□ 0.54
LMO4-201ENST00000370542 MRIQ9BWK5 157 aa18.45■□□□□ 0.54
LMO4-201ENST00000370542 HDLBPQ00341 1268 aaKnown RBP18.44■□□□□ 0.54
LMO4-201ENST00000370542 SUPT20HL1Q3ZLR7 823 aa18.44■□□□□ 0.54
LMO4-201ENST00000370542 METTL24Q5JXM2 366 aa18.44■□□□□ 0.54
LMO4-201ENST00000370542 SPRYD7Q5W111 196 aa18.44■□□□□ 0.54
LMO4-201ENST00000370542 ANGEL1Q9UNK9 670 aaKnown RBP18.44■□□□□ 0.54
LMO4-201ENST00000370542 TTF2Q9UNY4 1162 aaKnown RBP18.44■□□□□ 0.54
LMO4-201ENST00000370542 BRCA2P51587 3418 aa18.44■□□□□ 0.54
LMO4-201ENST00000370542 CLRN2A0PK11 232 aa18.43■□□□□ 0.54
LMO4-201ENST00000370542 PPP1R12BO60237 982 aaPredicted RBP18.43■□□□□ 0.54
LMO4-201ENST00000370542 RASA3Q14644 834 aa18.43■□□□□ 0.54
LMO4-201ENST00000370542 NBPF12Q5TAG4 269 aaPredicted RBP18.43■□□□□ 0.54
LMO4-201ENST00000370542 KLHDC4Q8TBB5 520 aa18.43■□□□□ 0.54
LMO4-201ENST00000370542 TBC1D22AQ8WUA7 517 aa18.43■□□□□ 0.54
LMO4-201ENST00000370542 FBXO3Q9UK99 471 aa18.43■□□□□ 0.54
LMO4-201ENST00000370542 CENPFP49454 3210 aa18.42■□□□□ 0.54
LMO4-201ENST00000370542 EYA2O00167 538 aa18.42■□□□□ 0.54
LMO4-201ENST00000370542 ZBTB22O15209 634 aa18.42■□□□□ 0.54
LMO4-201ENST00000370542 USP2O75604 605 aaPredicted RBP18.42■□□□□ 0.54
LMO4-201ENST00000370542 ZBTB48P10074 688 aaPredicted RBP18.42■□□□□ 0.54
LMO4-201ENST00000370542 INHBEP58166 350 aa18.42■□□□□ 0.54
LMO4-201ENST00000370542 SREBF2Q12772 1141 aa18.42■□□□□ 0.54
LMO4-201ENST00000370542 GRIK5Q16478 980 aa18.42■□□□□ 0.54
LMO4-201ENST00000370542 CAVIN4Q5BKX8 364 aa18.42■□□□□ 0.54
LMO4-201ENST00000370542 DZIP1LQ8IYY4 767 aaKnown RBP18.42■□□□□ 0.54
LMO4-201ENST00000370542 TEPSINQ96N21 525 aa18.42■□□□□ 0.54
LMO4-201ENST00000370542 SMC4Q9NTJ3 1288 aa18.42■□□□□ 0.54
LMO4-201ENST00000370542 ZNF70Q9UC06 446 aaPredicted RBP18.42■□□□□ 0.54
LMO4-201ENST00000370542 FZD1Q9UP38 647 aa18.42■□□□□ 0.54
LMO4-201ENST00000370542 SUGT1Q9Y2Z0 365 aa18.42■□□□□ 0.54
LMO4-201ENST00000370542 TNFAIP1Q13829 316 aa18.41■□□□□ 0.54
LMO4-201ENST00000370542 PRKG1Q13976 671 aa18.41■□□□□ 0.54
LMO4-201ENST00000370542 PUM3Q15397 648 aaKnown RBP18.41■□□□□ 0.54
LMO4-201ENST00000370542 ATG9AQ7Z3C6 839 aa18.41■□□□□ 0.54
LMO4-201ENST00000370542 OTUD5Q96G74 571 aa18.41■□□□□ 0.54
LMO4-201ENST00000370542 COL6A3P12111 3177 aa18.41■□□□□ 0.54
LMO4-201ENST00000370542 CUL9Q8IWT3 2517 aa18.41■□□□□ 0.54
LMO4-201ENST00000370542 FKTNO75072 461 aa18.4■□□□□ 0.54
LMO4-201ENST00000370542 CRKP46108 304 aa18.4■□□□□ 0.54
LMO4-201ENST00000370542 BCAMP50895 628 aa18.4■□□□□ 0.54
LMO4-201ENST00000370542 RBM5P52756 815 aaKnown RBP eCLIP18.4■□□□□ 0.54
LMO4-201ENST00000370542 CENPQQ7L2Z9 268 aaPredicted RBP18.4■□□□□ 0.54
LMO4-201ENST00000370542 SLC10A4Q96EP9 437 aa18.4■□□□□ 0.54
LMO4-201ENST00000370542 TDRD3Q9H7E2 651 aaKnown RBP18.4■□□□□ 0.54
LMO4-201ENST00000370542 VEZTQ9HBM0 779 aa18.4■□□□□ 0.54
LMO4-201ENST00000370542 NOB1Q9ULX3 412 aaKnown RBP18.4■□□□□ 0.54
LMO4-201ENST00000370542 MANSC4A6NHS7 340 aaPredicted RBP18.39■□□□□ 0.53
LMO4-201ENST00000370542 VPS37DQ86XT2 251 aa18.39■□□□□ 0.53
LMO4-201ENST00000370542 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.39■□□□□ 0.53
LMO4-201ENST00000370542 IL27Q8NEV9 243 aa18.39■□□□□ 0.53
LMO4-201ENST00000370542 LPIN2Q92539 896 aa18.39■□□□□ 0.53
LMO4-201ENST00000370542 ARHGAP45Q92619 1136 aa18.39■□□□□ 0.53
LMO4-201ENST00000370542 WNK4Q96J92 1243 aa18.39■□□□□ 0.53
LMO4-201ENST00000370542 CLMNQ96JQ2 1002 aa18.39■□□□□ 0.53
LMO4-201ENST00000370542 CIAO1O76071 339 aa18.38■□□□□ 0.53
LMO4-201ENST00000370542 ALDH1A1P00352 501 aa18.38■□□□□ 0.53
LMO4-201ENST00000370542 IFIT1P09914 478 aaKnown RBP18.38■□□□□ 0.53
LMO4-201ENST00000370542 IREB2P48200 963 aaKnown RBP18.38■□□□□ 0.53
LMO4-201ENST00000370542 RARSP54136 660 aaKnown RBP18.38■□□□□ 0.53
LMO4-201ENST00000370542 ZDHHC15Q96MV8 337 aa18.38■□□□□ 0.53
LMO4-201ENST00000370542 API5Q9BZZ5 524 aaKnown RBP18.38■□□□□ 0.53
LMO4-201ENST00000370542 IQSEC3Q9UPP2 1182 aaPredicted RBP18.38■□□□□ 0.53
LMO4-201ENST00000370542 RANBP2P49792 3224 aaKnown RBP18.38■□□□□ 0.53
LMO4-201ENST00000370542 TESPA1A2RU30 521 aaPredicted RBP18.37■□□□□ 0.53
LMO4-201ENST00000370542 UBTFL1P0CB47 393 aaPredicted RBP18.37■□□□□ 0.53
LMO4-201ENST00000370542 EN2P19622 333 aaPredicted RBP18.37■□□□□ 0.53
LMO4-201ENST00000370542 MKRN3Q13064 507 aaKnown RBP18.37■□□□□ 0.53
LMO4-201ENST00000370542 FKBP1CQ5VVH2 108 aa18.37■□□□□ 0.53
LMO4-201ENST00000370542 ANKRD13AQ8IZ07 590 aa18.37■□□□□ 0.53
LMO4-201ENST00000370542 R3HDMLQ9H3Y0 253 aa18.37■□□□□ 0.53
LMO4-201ENST00000370542 GJA5P36382 358 aa18.36■□□□□ 0.53
LMO4-201ENST00000370542 APOBEC3HQ6NTF7 200 aaKnown RBP18.36■□□□□ 0.53
LMO4-201ENST00000370542 HHIPL2Q6UWX4 724 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms