RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 MASTLQ96GX5 879 aa16.89■□□□□ 0.3
NIPAL3-203ENST00000358028 NAP1L5Q96NT1 182 aaPredicted RBP16.89■□□□□ 0.3
NIPAL3-203ENST00000358028 CCDC85AQ96PX6 553 aaPredicted RBP16.89■□□□□ 0.3
NIPAL3-203ENST00000358028 CCDC39Q9UFE4 941 aa16.89■□□□□ 0.3
NIPAL3-203ENST00000358028 ADORA1P30542 326 aa16.89■□□□□ 0.29
NIPAL3-203ENST00000358028 SLFNL1Q499Z3 407 aa16.89■□□□□ 0.29
NIPAL3-203ENST00000358028 LARP1BQ659C4 914 aaKnown RBP16.89■□□□□ 0.29
NIPAL3-203ENST00000358028 STYK1Q6J9G0 422 aa16.89■□□□□ 0.29
NIPAL3-203ENST00000358028 TTLL6Q8N841 843 aa16.89■□□□□ 0.29
NIPAL3-203ENST00000358028 XAGE2Q96GT9 111 aa16.89■□□□□ 0.29
NIPAL3-203ENST00000358028 MAST3O60307 1309 aa16.89■□□□□ 0.29
NIPAL3-203ENST00000358028 SBF1O95248 1867 aa16.88■□□□□ 0.29
NIPAL3-203ENST00000358028 NPR1P16066 1061 aa16.88■□□□□ 0.29
NIPAL3-203ENST00000358028 GORABQ5T7V8 394 aa16.88■□□□□ 0.29
NIPAL3-203ENST00000358028 Q6ZUG5 572 aa16.88■□□□□ 0.29
NIPAL3-203ENST00000358028 NLRP3Q96P20 1036 aa16.88■□□□□ 0.29
NIPAL3-203ENST00000358028 IRS4O14654 1257 aaPredicted RBP16.87■□□□□ 0.29
NIPAL3-203ENST00000358028 FIBPO43427 364 aa16.87■□□□□ 0.29
NIPAL3-203ENST00000358028 LRRFIP1Q32MZ4 808 aaKnown RBP16.87■□□□□ 0.29
NIPAL3-203ENST00000358028 STOX1Q6ZVD7 989 aa16.87■□□□□ 0.29
NIPAL3-203ENST00000358028 ZNF500O60304 480 aaPredicted RBP16.87■□□□□ 0.29
NIPAL3-203ENST00000358028 HMGB1P09429 215 aaKnown RBP16.87■□□□□ 0.29
NIPAL3-203ENST00000358028 CTSWP56202 376 aa16.87■□□□□ 0.29
NIPAL3-203ENST00000358028 DNM1Q05193 864 aaKnown RBP16.87■□□□□ 0.29
NIPAL3-203ENST00000358028 STK3Q13188 491 aa16.87■□□□□ 0.29
NIPAL3-203ENST00000358028 TTLL11Q8NHH1 800 aa16.87■□□□□ 0.29
NIPAL3-203ENST00000358028 RPGRQ92834 1020 aaKnown RBP16.87■□□□□ 0.29
NIPAL3-203ENST00000358028 GTF3C6Q969F1 213 aa16.87■□□□□ 0.29
NIPAL3-203ENST00000358028 M0R2C6 588 aa16.86■□□□□ 0.29
NIPAL3-203ENST00000358028 MYH7P12883 1935 aa16.86■□□□□ 0.29
NIPAL3-203ENST00000358028 ANKRD18BA2A2Z9 1011 aa16.85■□□□□ 0.29
NIPAL3-203ENST00000358028 HSPD1P10809 573 aaKnown RBP16.85■□□□□ 0.29
NIPAL3-203ENST00000358028 HSP90B1P14625 803 aaKnown RBP16.85■□□□□ 0.29
NIPAL3-203ENST00000358028 ITGA6P23229 1130 aa16.85■□□□□ 0.29
NIPAL3-203ENST00000358028 FKBP4Q02790 459 aaKnown RBP eCLIP16.85■□□□□ 0.29
NIPAL3-203ENST00000358028 CDC37L1Q7L3B6 337 aa16.85■□□□□ 0.29
NIPAL3-203ENST00000358028 CNKSR1Q969H4 720 aa16.85■□□□□ 0.29
NIPAL3-203ENST00000358028 GREM2Q9H772 168 aa16.85■□□□□ 0.29
NIPAL3-203ENST00000358028 ZNF219Q9P2Y4 722 aaPredicted RBP16.85■□□□□ 0.29
NIPAL3-203ENST00000358028 RIPOR2Q9Y4F9 1068 aa16.85■□□□□ 0.29
NIPAL3-203ENST00000358028 OFD1O75665 1012 aa16.84■□□□□ 0.29
NIPAL3-203ENST00000358028 ZFYP08048 801 aaPredicted RBP16.84■□□□□ 0.29
NIPAL3-203ENST00000358028 HOXA10P31260 410 aaPredicted RBP16.84■□□□□ 0.29
NIPAL3-203ENST00000358028 ATP2B3Q16720 1220 aa16.84■□□□□ 0.29
NIPAL3-203ENST00000358028 METTL24Q5JXM2 366 aa16.84■□□□□ 0.29
NIPAL3-203ENST00000358028 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.84■□□□□ 0.29
NIPAL3-203ENST00000358028 DHX32Q7L7V1 743 aaKnown RBP16.84■□□□□ 0.29
NIPAL3-203ENST00000358028 ZKSCAN5Q9Y2L8 839 aa16.84■□□□□ 0.29
NIPAL3-203ENST00000358028 LDHAL6AQ6ZMR3 332 aa16.84■□□□□ 0.29
NIPAL3-203ENST00000358028 SLC51AQ86UW1 340 aa16.84■□□□□ 0.29
NIPAL3-203ENST00000358028 LRRC37AA6NMS7 1700 aa16.84■□□□□ 0.29
NIPAL3-203ENST00000358028 ELP1O95163 1332 aa16.83■□□□□ 0.28
NIPAL3-203ENST00000358028 C21orf2O43822 256 aa16.83■□□□□ 0.28
NIPAL3-203ENST00000358028 PDE8AO60658 829 aa16.83■□□□□ 0.28
NIPAL3-203ENST00000358028 TPM2P07951 284 aa16.83■□□□□ 0.28
NIPAL3-203ENST00000358028 TERF1P54274 439 aa16.83■□□□□ 0.28
NIPAL3-203ENST00000358028 SCARF1Q14162 830 aa16.83■□□□□ 0.28
NIPAL3-203ENST00000358028 BRF1Q92994 677 aa16.83■□□□□ 0.28
NIPAL3-203ENST00000358028 OSBP2Q969R2 916 aa16.83■□□□□ 0.28
NIPAL3-203ENST00000358028 E7EWF7 191 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 ZAP70P43403 619 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 C1QTNF8P60827 252 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 EXOSC10Q01780 885 aaKnown RBP16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 OLFM4Q6UX06 510 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 RBM17Q96I25 401 aaKnown RBP16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 CNNM1Q9NRU3 951 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 AKAP11Q9UKA4 1901 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 PFKFB2O60825 505 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 ALDH1B1P30837 517 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 KRT85P78386 507 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 FGD1P98174 961 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 SF3B3Q15393 1217 aaKnown RBP16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 ARHGAP27Q6ZUM4 889 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 RNF214Q8ND24 703 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 CRAMP1Q96RY5 1269 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 LRRC2Q9BYS8 371 aa16.82■□□□□ 0.28
NIPAL3-203ENST00000358028 ARAP2Q8WZ64 1704 aa16.81■□□□□ 0.28
NIPAL3-203ENST00000358028 DICER1Q9UPY3 1922 aaKnown RBP16.81■□□□□ 0.28
NIPAL3-203ENST00000358028 TIAM2Q8IVF5 1701 aa16.81■□□□□ 0.28
NIPAL3-203ENST00000358028 JAK2O60674 1132 aa16.81■□□□□ 0.28
NIPAL3-203ENST00000358028 WASHC4Q2M389 1173 aa16.81■□□□□ 0.28
NIPAL3-203ENST00000358028 FERMT3Q86UX7 667 aa16.81■□□□□ 0.28
NIPAL3-203ENST00000358028 VGLL2Q8N8G2 317 aa16.81■□□□□ 0.28
NIPAL3-203ENST00000358028 C7orf43Q8WVR3 580 aa16.81■□□□□ 0.28
NIPAL3-203ENST00000358028 APPBP2Q92624 585 aa16.81■□□□□ 0.28
NIPAL3-203ENST00000358028 ZNF512BQ96KM6 892 aaPredicted RBP16.81■□□□□ 0.28
NIPAL3-203ENST00000358028 LLPHQ9BRT6 129 aaKnown RBP16.81■□□□□ 0.28
NIPAL3-203ENST00000358028 AGXT2Q9BYV1 514 aa16.81■□□□□ 0.28
NIPAL3-203ENST00000358028 SCRN1Q12765 414 aa16.8■□□□□ 0.28
NIPAL3-203ENST00000358028 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.8■□□□□ 0.28
NIPAL3-203ENST00000358028 CTNNA3Q9UI47 895 aa16.8■□□□□ 0.28
NIPAL3-203ENST00000358028 SNED1Q8TER0 1413 aa16.8■□□□□ 0.28
NIPAL3-203ENST00000358028 CEP350Q5VT06 3117 aa16.8■□□□□ 0.28
NIPAL3-203ENST00000358028 PPEF1O14829 653 aaPredicted RBP16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 RASSF7Q02833 373 aa16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 TPRNQ4KMQ1 711 aa16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 SMARCC2Q8TAQ2 1214 aa16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 NFKBIEO00221 500 aa16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 FOXP2O15409 715 aa16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 MCAMP43121 646 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms