RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 NSUN4Q96CB9 384 aaKnown RBP18.03■□□□□ 0.48
CCNE1-202ENST00000357943 USP17L8P0C7I0 530 aa18.02■□□□□ 0.48
CCNE1-202ENST00000357943 SDSP20132 328 aa18.02■□□□□ 0.48
CCNE1-202ENST00000357943 MAP3K12Q12852 859 aa18.02■□□□□ 0.48
CCNE1-202ENST00000357943 DIXDC1Q155Q3 683 aa18.02■□□□□ 0.48
CCNE1-202ENST00000357943 DZIP1Q86YF9 867 aaKnown RBP18.02■□□□□ 0.48
CCNE1-202ENST00000357943 MICALL2Q8IY33 904 aa18.02■□□□□ 0.48
CCNE1-202ENST00000357943 CNOT7Q9UIV1 285 aaKnown RBP18.02■□□□□ 0.48
CCNE1-202ENST00000357943 SLFNL1Q499Z3 407 aa18.01■□□□□ 0.47
CCNE1-202ENST00000357943 SLC9C2Q5TAH2 1124 aa18.01■□□□□ 0.47
CCNE1-202ENST00000357943 L3MBTL3Q96JM7 780 aaPredicted RBP18.01■□□□□ 0.47
CCNE1-202ENST00000357943 FSD1Q9BTV5 496 aa18.01■□□□□ 0.47
CCNE1-202ENST00000357943 GPRC5DQ9NZD1 345 aa18.01■□□□□ 0.47
CCNE1-202ENST00000357943 EPS15P42566 896 aa18.01■□□□□ 0.47
CCNE1-202ENST00000357943 BMP2KLQ5H9B9 411 aa18.01■□□□□ 0.47
CCNE1-202ENST00000357943 OGFOD1Q8N543 542 aa18.01■□□□□ 0.47
CCNE1-202ENST00000357943 MAGEB6Q8N7X4 407 aa18.01■□□□□ 0.47
CCNE1-202ENST00000357943 MYO5AQ9Y4I1 1855 aaKnown RBP18.01■□□□□ 0.47
CCNE1-202ENST00000357943 PCDHAC2Q9Y5I4 1007 aa18.01■□□□□ 0.47
CCNE1-202ENST00000357943 PDE6AP16499 860 aa18■□□□□ 0.47
CCNE1-202ENST00000357943 HDAC9Q9UKV0 1011 aa18■□□□□ 0.47
CCNE1-202ENST00000357943 MAST3O60307 1309 aa17.99■□□□□ 0.47
CCNE1-202ENST00000357943 EGFRP00533 1210 aa17.99■□□□□ 0.47
CCNE1-202ENST00000357943 ADD2P35612 726 aa17.99■□□□□ 0.47
CCNE1-202ENST00000357943 CRKP46108 304 aa17.99■□□□□ 0.47
CCNE1-202ENST00000357943 ZNF280AP59817 542 aaPredicted RBP17.99■□□□□ 0.47
CCNE1-202ENST00000357943 NAA16Q6N069 864 aaPredicted RBP17.99■□□□□ 0.47
CCNE1-202ENST00000357943 ADGRA1Q86SQ6 560 aa17.99■□□□□ 0.47
CCNE1-202ENST00000357943 ZNF526Q8TF50 670 aaPredicted RBP17.99■□□□□ 0.47
CCNE1-202ENST00000357943 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.99■□□□□ 0.47
CCNE1-202ENST00000357943 DOCK2Q92608 1830 aa17.99■□□□□ 0.47
CCNE1-202ENST00000357943 ZNF532Q9HCE3 1301 aa17.98■□□□□ 0.47
CCNE1-202ENST00000357943 TCRBV5S4A2TA0A5A2 114 aa17.98■□□□□ 0.47
CCNE1-202ENST00000357943 POTECB2RU33 542 aa17.98■□□□□ 0.47
CCNE1-202ENST00000357943 LMOD1P29536 600 aaPredicted RBP17.98■□□□□ 0.47
CCNE1-202ENST00000357943 SAMD7Q7Z3H4 446 aa17.98■□□□□ 0.47
CCNE1-202ENST00000357943 TEKT1Q969V4 418 aa17.98■□□□□ 0.47
CCNE1-202ENST00000357943 MYOZ2Q9NPC6 264 aa17.98■□□□□ 0.47
CCNE1-202ENST00000357943 SERPINA10Q9UK55 444 aa17.98■□□□□ 0.47
CCNE1-202ENST00000357943 H7C1D1 291 aa17.98■□□□□ 0.47
CCNE1-202ENST00000357943 IGSF3O75054 1194 aa17.98■□□□□ 0.47
CCNE1-202ENST00000357943 CYP7A1P22680 504 aa17.98■□□□□ 0.47
CCNE1-202ENST00000357943 RBM5P52756 815 aaKnown RBP eCLIP17.98■□□□□ 0.47
CCNE1-202ENST00000357943 HDLBPQ00341 1268 aaKnown RBP17.98■□□□□ 0.47
CCNE1-202ENST00000357943 CFAP100Q494V2 611 aa17.98■□□□□ 0.47
CCNE1-202ENST00000357943 MRIQ9BWK5 157 aa17.98■□□□□ 0.47
CCNE1-202ENST00000357943 MROH7-TTC4A0A0A0MT08 1334 aa17.97■□□□□ 0.47
CCNE1-202ENST00000357943 RNF113AO15541 343 aaKnown RBP17.97■□□□□ 0.47
CCNE1-202ENST00000357943 GSTO1P78417 241 aa17.97■□□□□ 0.47
CCNE1-202ENST00000357943 TBC1D10BQ4KMP7 808 aaPredicted RBP17.97■□□□□ 0.47
CCNE1-202ENST00000357943 RBM26Q5T8P6 1007 aaKnown RBP17.97■□□□□ 0.47
CCNE1-202ENST00000357943 ZSCAN25Q6NSZ9 544 aa17.97■□□□□ 0.47
CCNE1-202ENST00000357943 HHIPL2Q6UWX4 724 aa17.97■□□□□ 0.47
CCNE1-202ENST00000357943 FAM163AQ96GL9 167 aaPredicted RBP17.97■□□□□ 0.47
CCNE1-202ENST00000357943 DAGLAQ9Y4D2 1042 aa17.97■□□□□ 0.47
CCNE1-202ENST00000357943 GAKO14976 1311 aa17.96■□□□□ 0.47
CCNE1-202ENST00000357943 UBE3CQ15386 1083 aa17.96■□□□□ 0.47
CCNE1-202ENST00000357943 SLF2Q8IX21 1173 aa17.96■□□□□ 0.47
CCNE1-202ENST00000357943 TRPM4Q8TD43 1214 aa17.96■□□□□ 0.47
CCNE1-202ENST00000357943 RRAGCQ9HB90 399 aa17.96■□□□□ 0.47
CCNE1-202ENST00000357943 HACL1Q9UJ83 578 aa17.96■□□□□ 0.47
CCNE1-202ENST00000357943 ADAMTSL1Q8N6G6 1762 aa17.96■□□□□ 0.47
CCNE1-202ENST00000357943 WDR90Q96KV7 1748 aa17.95■□□□□ 0.46
CCNE1-202ENST00000357943 ZFYP08048 801 aaPredicted RBP17.95■□□□□ 0.46
CCNE1-202ENST00000357943 MMP14P50281 582 aa17.95■□□□□ 0.46
CCNE1-202ENST00000357943 DLGAP5Q15398 846 aa17.95■□□□□ 0.46
CCNE1-202ENST00000357943 LRRFIP1Q32MZ4 808 aaKnown RBP17.95■□□□□ 0.46
CCNE1-202ENST00000357943 APOBEC3HQ6NTF7 200 aaKnown RBP17.95■□□□□ 0.46
CCNE1-202ENST00000357943 MIGA1Q8NAN2 632 aa17.95■□□□□ 0.46
CCNE1-202ENST00000357943 PRMT6Q96LA8 375 aaPredicted RBP17.95■□□□□ 0.46
CCNE1-202ENST00000357943 ZDHHC15Q96MV8 337 aa17.95■□□□□ 0.46
CCNE1-202ENST00000357943 ADARB2Q9NS39 739 aaKnown RBP17.95■□□□□ 0.46
CCNE1-202ENST00000357943 MAST2Q6P0Q8 1798 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 IQCA1LA6NCM1 817 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 SPDYE2BA6NHP3 402 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 WNT10BO00744 389 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 LDHCP07864 332 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 SPDYE6P0CI01 402 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 EPHX2P34913 555 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 BTDP43251 543 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 HIRAP54198 1017 aaPredicted RBP17.94■□□□□ 0.46
CCNE1-202ENST00000357943 KIF4BQ2VIQ3 1234 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 NBPF9Q3BBW0 867 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 MTMR14Q8NCE2 650 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 OSBP2Q969R2 916 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 ZBED3Q96IU2 234 aaPredicted RBP17.94■□□□□ 0.46
CCNE1-202ENST00000357943 FAM227BQ96M60 508 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 SEC62Q99442 399 aaKnown RBP17.94■□□□□ 0.46
CCNE1-202ENST00000357943 PUS7LQ9H0K6 701 aaKnown RBP17.94■□□□□ 0.46
CCNE1-202ENST00000357943 TAF1DQ9H5J8 278 aaPredicted RBP17.94■□□□□ 0.46
CCNE1-202ENST00000357943 NMRK2Q9NPI5 230 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 AATFQ9NY61 560 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCNE1-202ENST00000357943 RFX7Q2KHR2 1363 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 GPR75-ASB3A0A0A6YYF3 556 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 APPBP2Q92624 585 aa17.94■□□□□ 0.46
CCNE1-202ENST00000357943 A0A0D9SFI3 127 aa17.93■□□□□ 0.46
CCNE1-202ENST00000357943 DYNLL1P63167 89 aaKnown RBP17.93■□□□□ 0.46
CCNE1-202ENST00000357943 NMIQ13287 307 aaPredicted RBP17.93■□□□□ 0.46
CCNE1-202ENST00000357943 ZMYM1Q5SVZ6 1142 aa17.93■□□□□ 0.46
CCNE1-202ENST00000357943 TMED8Q6PL24 325 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms