RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 PPP1R12BO60237 982 aaPredicted RBP19.98■□□□□ 0.79
PDGFA-201ENST00000354513 PDE8BO95263 885 aa19.98■□□□□ 0.79
PDGFA-201ENST00000354513 FGFR2P21802 821 aa19.98■□□□□ 0.79
PDGFA-201ENST00000354513 CRKP46108 304 aa19.98■□□□□ 0.79
PDGFA-201ENST00000354513 SUPT20HL1Q3ZLR7 823 aa19.98■□□□□ 0.79
PDGFA-201ENST00000354513 DZIP1LQ8IYY4 767 aaKnown RBP19.98■□□□□ 0.79
PDGFA-201ENST00000354513 UNCXA6NJT0 531 aa19.97■□□□□ 0.79
PDGFA-201ENST00000354513 FKTNO75072 461 aa19.97■□□□□ 0.79
PDGFA-201ENST00000354513 METTL24Q5JXM2 366 aa19.97■□□□□ 0.79
PDGFA-201ENST00000354513 DOCK2Q92608 1830 aa19.96■□□□□ 0.79
PDGFA-201ENST00000354513 CHAF1AQ13111 956 aaPredicted RBP19.96■□□□□ 0.79
PDGFA-201ENST00000354513 PKN2Q16513 984 aaKnown RBP19.96■□□□□ 0.79
PDGFA-201ENST00000354513 TRMT2AQ8IZ69 625 aaKnown RBP19.96■□□□□ 0.79
PDGFA-201ENST00000354513 PTPN18Q99952 460 aa19.96■□□□□ 0.79
PDGFA-201ENST00000354513 CENPFP49454 3210 aa19.95■□□□□ 0.78
PDGFA-201ENST00000354513 TCP10L2B9ZVM9 353 aa19.95■□□□□ 0.78
PDGFA-201ENST00000354513 BCAMP50895 628 aa19.95■□□□□ 0.78
PDGFA-201ENST00000354513 CAP1Q01518 475 aa19.95■□□□□ 0.78
PDGFA-201ENST00000354513 FBXO46Q6PJ61 603 aaPredicted RBP19.95■□□□□ 0.78
PDGFA-201ENST00000354513 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.95■□□□□ 0.78
PDGFA-201ENST00000354513 ANKRD13AQ8IZ07 590 aa19.95■□□□□ 0.78
PDGFA-201ENST00000354513 CNKSR2Q8WXI2 1034 aa19.95■□□□□ 0.78
PDGFA-201ENST00000354513 TMEM39BQ9GZU3 492 aa19.95■□□□□ 0.78
PDGFA-201ENST00000354513 MYH2Q9UKX2 1941 aa19.94■□□□□ 0.78
PDGFA-201ENST00000354513 PDE4DIPQ5VU43 2346 aa19.94■□□□□ 0.78
PDGFA-201ENST00000354513 TESPA1A2RU30 521 aaPredicted RBP19.94■□□□□ 0.78
PDGFA-201ENST00000354513 SLC34A2O95436 690 aa19.94■□□□□ 0.78
PDGFA-201ENST00000354513 IREB2P48200 963 aaKnown RBP19.94■□□□□ 0.78
PDGFA-201ENST00000354513 ELP3Q9H9T3 547 aa19.94■□□□□ 0.78
PDGFA-201ENST00000354513 KIF16BQ96L93 1317 aa19.94■□□□□ 0.78
PDGFA-201ENST00000354513 ALDH1A1P00352 501 aa19.93■□□□□ 0.78
PDGFA-201ENST00000354513 CACNB3P54284 484 aa19.93■□□□□ 0.78
PDGFA-201ENST00000354513 INHBEP58166 350 aa19.93■□□□□ 0.78
PDGFA-201ENST00000354513 TNFAIP1Q13829 316 aa19.93■□□□□ 0.78
PDGFA-201ENST00000354513 ALDH1L2Q3SY69 923 aa19.93■□□□□ 0.78
PDGFA-201ENST00000354513 ATG9AQ7Z3C6 839 aa19.93■□□□□ 0.78
PDGFA-201ENST00000354513 HDLBPQ00341 1268 aaKnown RBP19.92■□□□□ 0.78
PDGFA-201ENST00000354513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.92■□□□□ 0.78
PDGFA-201ENST00000354513 OPTNQ96CV9 577 aa19.92■□□□□ 0.78
PDGFA-201ENST00000354513 MS4A4AQ96JQ5 239 aa19.92■□□□□ 0.78
PDGFA-201ENST00000354513 AK9Q5TCS8 1911 aa19.92■□□□□ 0.78
PDGFA-201ENST00000354513 EYA2O00167 538 aa19.91■□□□□ 0.78
PDGFA-201ENST00000354513 CRHR2Q13324 411 aa19.91■□□□□ 0.78
PDGFA-201ENST00000354513 VGLL4Q14135 290 aa19.91■□□□□ 0.78
PDGFA-201ENST00000354513 PUM3Q15397 648 aaKnown RBP19.91■□□□□ 0.78
PDGFA-201ENST00000354513 VPS37DQ86XT2 251 aa19.91■□□□□ 0.78
PDGFA-201ENST00000354513 TBC1D22AQ8WUA7 517 aa19.91■□□□□ 0.78
PDGFA-201ENST00000354513 ZDHHC15Q96MV8 337 aa19.91■□□□□ 0.78
PDGFA-201ENST00000354513 CAVIN4Q5BKX8 364 aa19.9■□□□□ 0.78
PDGFA-201ENST00000354513 APOBEC3HQ6NTF7 200 aaKnown RBP19.9■□□□□ 0.78
PDGFA-201ENST00000354513 OTOP1Q7RTM1 612 aa19.9■□□□□ 0.78
PDGFA-201ENST00000354513 SMC4Q9NTJ3 1288 aa19.9■□□□□ 0.78
PDGFA-201ENST00000354513 BRCA2P51587 3418 aa19.9■□□□□ 0.78
PDGFA-201ENST00000354513 BRI3BPQ8WY22 251 aa19.89■□□□□ 0.77
PDGFA-201ENST00000354513 TEKT1Q969V4 418 aa19.89■□□□□ 0.77
PDGFA-201ENST00000354513 RPAP1Q9BWH6 1393 aaPredicted RBP19.89■□□□□ 0.77
PDGFA-201ENST00000354513 PTPRFP10586 1907 aa19.89■□□□□ 0.77
PDGFA-201ENST00000354513 CD99L2Q8TCZ2 262 aa19.88■□□□□ 0.77
PDGFA-201ENST00000354513 MRIQ9BWK5 157 aa19.88■□□□□ 0.77
PDGFA-201ENST00000354513 SNCAIPQ9Y6H5 919 aa19.88■□□□□ 0.77
PDGFA-201ENST00000354513 PHIPQ8WWQ0 1821 aa19.88■□□□□ 0.77
PDGFA-201ENST00000354513 IFIT1P09914 478 aaKnown RBP19.87■□□□□ 0.77
PDGFA-201ENST00000354513 TNNI2P48788 182 aa19.87■□□□□ 0.77
PDGFA-201ENST00000354513 TRIM17Q9Y577 477 aa19.87■□□□□ 0.77
PDGFA-201ENST00000354513 FRAT2O75474 233 aaPredicted RBP19.86■□□□□ 0.77
PDGFA-201ENST00000354513 MAP3K9P80192 1104 aa19.86■□□□□ 0.77
PDGFA-201ENST00000354513 FAM83AQ86UY5 434 aa19.86■□□□□ 0.77
PDGFA-201ENST00000354513 LPIN2Q92539 896 aa19.86■□□□□ 0.77
PDGFA-201ENST00000354513 SUGT1Q9Y2Z0 365 aa19.86■□□□□ 0.77
PDGFA-201ENST00000354513 MKI67P46013 3256 aaKnown RBP19.86■□□□□ 0.77
PDGFA-201ENST00000354513 SPDYE5A6NIY4 337 aa19.85■□□□□ 0.77
PDGFA-201ENST00000354513 SLC5A1P13866 664 aa19.85■□□□□ 0.77
PDGFA-201ENST00000354513 FKBP1CQ5VVH2 108 aa19.85■□□□□ 0.77
PDGFA-201ENST00000354513 HHIPL2Q6UWX4 724 aa19.85■□□□□ 0.77
PDGFA-201ENST00000354513 SIL1Q9H173 461 aa19.85■□□□□ 0.77
PDGFA-201ENST00000354513 NOB1Q9ULX3 412 aaKnown RBP19.85■□□□□ 0.77
PDGFA-201ENST00000354513 MGAMO43451 1857 aa19.85■□□□□ 0.77
PDGFA-201ENST00000354513 DOCK1Q14185 1865 aa19.85■□□□□ 0.77
PDGFA-201ENST00000354513 MAST3O60307 1309 aa19.84■□□□□ 0.77
PDGFA-201ENST00000354513 FAM43AQ8N2R8 423 aa19.84■□□□□ 0.77
PDGFA-201ENST00000354513 OTUD5Q96G74 571 aa19.84■□□□□ 0.77
PDGFA-201ENST00000354513 PA2G4Q9UQ80 394 aaKnown RBP19.84■□□□□ 0.77
PDGFA-201ENST00000354513 DAGLAQ9Y4D2 1042 aa19.84■□□□□ 0.77
PDGFA-201ENST00000354513 LRRFIP2Q9Y608 721 aaKnown RBP19.84■□□□□ 0.77
PDGFA-201ENST00000354513 CCL15-CCL14A0A0B4J2E2 113 aa19.83■□□□□ 0.77
PDGFA-201ENST00000354513 CIAO1O76071 339 aa19.83■□□□□ 0.77
PDGFA-201ENST00000354513 UBTFL1P0CB47 393 aaPredicted RBP19.83■□□□□ 0.77
PDGFA-201ENST00000354513 PRDX5P30044 214 aa19.83■□□□□ 0.77
PDGFA-201ENST00000354513 DIXDC1Q155Q3 683 aa19.83■□□□□ 0.77
PDGFA-201ENST00000354513 CCL15Q16663 113 aa19.83■□□□□ 0.77
PDGFA-201ENST00000354513 ERO1AQ96HE7 468 aa19.83■□□□□ 0.77
PDGFA-201ENST00000354513 MEIS3Q99687 375 aa19.83■□□□□ 0.77
PDGFA-201ENST00000354513 PTPN22Q9Y2R2 807 aa19.83■□□□□ 0.77
PDGFA-201ENST00000354513 ATP2B3Q16720 1220 aa19.82■□□□□ 0.76
PDGFA-201ENST00000354513 OTUD7BQ6GQQ9 843 aa19.82■□□□□ 0.76
PDGFA-201ENST00000354513 WDR66Q8TBY9 1149 aa19.82■□□□□ 0.76
PDGFA-201ENST00000354513 ZKSCAN4Q969J2 545 aaPredicted RBP19.82■□□□□ 0.76
PDGFA-201ENST00000354513 WRNIP1Q96S55 665 aa19.82■□□□□ 0.76
PDGFA-201ENST00000354513 FBXO3Q9UK99 471 aa19.82■□□□□ 0.76
PDGFA-201ENST00000354513 CSADQ9Y600 493 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms