RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PSMC4P43686 418 aa20.28■□□□□ 0.84
DDX55-202ENST00000354291 GJA8P48165 433 aa20.28■□□□□ 0.84
DDX55-202ENST00000354291 GNAI1P63096 354 aa20.28■□□□□ 0.84
DDX55-202ENST00000354291 C15orf52Q6ZUT6 534 aaKnown RBP20.28■□□□□ 0.84
DDX55-202ENST00000354291 LRCH3Q96II8 777 aa20.28■□□□□ 0.84
DDX55-202ENST00000354291 CHMP4AQ9BY43 222 aa20.28■□□□□ 0.84
DDX55-202ENST00000354291 RNF208Q9H0X6 261 aa20.28■□□□□ 0.84
DDX55-202ENST00000354291 IFT57Q9NWB7 429 aa20.28■□□□□ 0.84
DDX55-202ENST00000354291 TTF2Q9UNY4 1162 aaKnown RBP20.28■□□□□ 0.84
DDX55-202ENST00000354291 ADAMTS8Q9UP79 889 aa20.28■□□□□ 0.84
DDX55-202ENST00000354291 IRS2Q9Y4H2 1338 aa20.27■□□□□ 0.84
DDX55-202ENST00000354291 ANKRD18BA2A2Z9 1011 aa20.27■□□□□ 0.84
DDX55-202ENST00000354291 ZBTB7BO15156 539 aaPredicted RBP20.27■□□□□ 0.84
DDX55-202ENST00000354291 PLIN1O60240 522 aa20.27■□□□□ 0.84
DDX55-202ENST00000354291 FMNL1O95466 1100 aaPredicted RBP20.27■□□□□ 0.84
DDX55-202ENST00000354291 CSF1RP07333 972 aa20.27■□□□□ 0.84
DDX55-202ENST00000354291 GJB1P08034 283 aa20.27■□□□□ 0.84
DDX55-202ENST00000354291 HOXD10P28358 340 aa20.27■□□□□ 0.84
DDX55-202ENST00000354291 GRK4P32298 578 aa20.27■□□□□ 0.84
DDX55-202ENST00000354291 PLA2G12BQ9BX93 195 aa20.27■□□□□ 0.84
DDX55-202ENST00000354291 SRRDQ9UH36 339 aa20.27■□□□□ 0.84
DDX55-202ENST00000354291 CPA4Q9UI42 421 aa20.27■□□□□ 0.84
DDX55-202ENST00000354291 RIPOR2Q9Y4F9 1068 aa20.27■□□□□ 0.84
DDX55-202ENST00000354291 SPDYE5A6NIY4 337 aa20.26■□□□□ 0.83
DDX55-202ENST00000354291 CTGFP29279 349 aa20.26■□□□□ 0.83
DDX55-202ENST00000354291 TNNI2P48788 182 aa20.26■□□□□ 0.83
DDX55-202ENST00000354291 SNAPC2Q13487 334 aa20.26■□□□□ 0.83
DDX55-202ENST00000354291 UBE2Q1Q7Z7E8 422 aa20.26■□□□□ 0.83
DDX55-202ENST00000354291 DZIP1LQ8IYY4 767 aaKnown RBP20.26■□□□□ 0.83
DDX55-202ENST00000354291 TRIM47Q96LD4 638 aa20.26■□□□□ 0.83
DDX55-202ENST00000354291 SERPINA10Q9UK55 444 aa20.26■□□□□ 0.83
DDX55-202ENST00000354291 IRF6O14896 467 aa20.25■□□□□ 0.83
DDX55-202ENST00000354291 OSBPP22059 807 aa20.25■□□□□ 0.83
DDX55-202ENST00000354291 GCKRQ14397 625 aa20.25■□□□□ 0.83
DDX55-202ENST00000354291 MFSD14BQ5SR56 506 aa20.25■□□□□ 0.83
DDX55-202ENST00000354291 C17orf99Q6UX52 265 aa20.25■□□□□ 0.83
DDX55-202ENST00000354291 ERO1BQ86YB8 467 aa20.25■□□□□ 0.83
DDX55-202ENST00000354291 ZKSCAN4Q969J2 545 aaPredicted RBP20.25■□□□□ 0.83
DDX55-202ENST00000354291 ZCCHC17Q9NP64 241 aaKnown RBP20.25■□□□□ 0.83
DDX55-202ENST00000354291 MNX1P50219 401 aaPredicted RBP20.24■□□□□ 0.83
DDX55-202ENST00000354291 TSPYL6Q8N831 410 aa20.24■□□□□ 0.83
DDX55-202ENST00000354291 STAP2Q9UGK3 403 aa20.24■□□□□ 0.83
DDX55-202ENST00000354291 CHMP3Q9Y3E7 222 aa20.24■□□□□ 0.83
DDX55-202ENST00000354291 SNCAIPQ9Y6H5 919 aa20.24■□□□□ 0.83
DDX55-202ENST00000354291 ZSWIM8A7E2V4 1837 aa20.24■□□□□ 0.83
DDX55-202ENST00000354291 MYH3P11055 1940 aa20.23■□□□□ 0.83
DDX55-202ENST00000354291 ECM29Q5VYK3 1845 aa20.23■□□□□ 0.83
DDX55-202ENST00000354291 EVI5O60447 810 aa20.23■□□□□ 0.83
DDX55-202ENST00000354291 FARP2O94887 1054 aaPredicted RBP20.23■□□□□ 0.83
DDX55-202ENST00000354291 UBXN2AP68543 259 aa20.23■□□□□ 0.83
DDX55-202ENST00000354291 CALD1Q05682 793 aaKnown RBP20.23■□□□□ 0.83
DDX55-202ENST00000354291 IFIT5Q13325 482 aaKnown RBP20.23■□□□□ 0.83
DDX55-202ENST00000354291 WRNIP1Q96S55 665 aa20.23■□□□□ 0.83
DDX55-202ENST00000354291 STK31Q9BXU1 1019 aa20.23■□□□□ 0.83
DDX55-202ENST00000354291 A0A1W2PPC1 479 aa20.22■□□□□ 0.83
DDX55-202ENST00000354291 CRKP46108 304 aa20.22■□□□□ 0.83
DDX55-202ENST00000354291 CASP7P55210 303 aa20.22■□□□□ 0.83
DDX55-202ENST00000354291 G2E3Q7L622 706 aa20.22■□□□□ 0.83
DDX55-202ENST00000354291 U2AF1L4Q8WU68 220 aaKnown RBP20.22■□□□□ 0.83
DDX55-202ENST00000354291 OTOFQ9HC10 1997 aa20.22■□□□□ 0.83
DDX55-202ENST00000354291 MYPNQ86TC9 1320 aa20.22■□□□□ 0.83
DDX55-202ENST00000354291 CACNB3P54284 484 aa20.21■□□□□ 0.83
DDX55-202ENST00000354291 FAM205AQ6ZU69 1335 aa20.21■□□□□ 0.83
DDX55-202ENST00000354291 PPIL2Q13356 520 aa20.2■□□□□ 0.82
DDX55-202ENST00000354291 UNC93B1Q9H1C4 597 aa20.2■□□□□ 0.82
DDX55-202ENST00000354291 MYH16Q9H6N6 1097 aa20.2■□□□□ 0.82
DDX55-202ENST00000354291 PDHXO00330 501 aa20.19■□□□□ 0.82
DDX55-202ENST00000354291 APAF1O14727 1248 aa20.19■□□□□ 0.82
DDX55-202ENST00000354291 TFRCP02786 760 aaKnown RBP20.19■□□□□ 0.82
DDX55-202ENST00000354291 SLC4A2P04920 1241 aa20.19■□□□□ 0.82
DDX55-202ENST00000354291 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.19■□□□□ 0.82
DDX55-202ENST00000354291 TDRD7Q8NHU6 1098 aaKnown RBP20.19■□□□□ 0.82
DDX55-202ENST00000354291 PRKRIP1Q9H875 184 aaPredicted RBP20.19■□□□□ 0.82
DDX55-202ENST00000354291 SGPL1O95470 568 aa20.18■□□□□ 0.82
DDX55-202ENST00000354291 HIBADHP31937 336 aaKnown RBP20.18■□□□□ 0.82
DDX55-202ENST00000354291 GYG1P46976 350 aa20.18■□□□□ 0.82
DDX55-202ENST00000354291 PRKCZQ05513 592 aa20.18■□□□□ 0.82
DDX55-202ENST00000354291 TAF7LQ5H9L4 462 aa20.18■□□□□ 0.82
DDX55-202ENST00000354291 ZNF594Q96JF6 807 aaPredicted RBP20.18■□□□□ 0.82
DDX55-202ENST00000354291 LDHAL6AQ6ZMR3 332 aa20.17■□□□□ 0.82
DDX55-202ENST00000354291 ANKRD23Q86SG2 305 aa20.17■□□□□ 0.82
DDX55-202ENST00000354291 DEFB123Q8N688 67 aa20.17■□□□□ 0.82
DDX55-202ENST00000354291 CNNM1Q9NRU3 951 aa20.17■□□□□ 0.82
DDX55-202ENST00000354291 FOXO4P98177 505 aa20.16■□□□□ 0.82
DDX55-202ENST00000354291 PPATQ06203 517 aa20.16■□□□□ 0.82
DDX55-202ENST00000354291 GRIK5Q16478 980 aa20.16■□□□□ 0.82
DDX55-202ENST00000354291 MIGA2Q7L4E1 593 aa20.16■□□□□ 0.82
DDX55-202ENST00000354291 UNC80Q8N2C7 3258 aa20.15■□□□□ 0.82
DDX55-202ENST00000354291 FCGRTP55899 365 aa20.15■□□□□ 0.82
DDX55-202ENST00000354291 CCDC57Q2TAC2 916 aa20.15■□□□□ 0.82
DDX55-202ENST00000354291 Q7L0L9 218 aa20.15■□□□□ 0.82
DDX55-202ENST00000354291 SLAIN1Q8ND83 568 aa20.15■□□□□ 0.82
DDX55-202ENST00000354291 HOOK2Q96ED9 719 aa20.15■□□□□ 0.82
DDX55-202ENST00000354291 TMOD2Q9NZR1 351 aa20.15■□□□□ 0.82
DDX55-202ENST00000354291 GABRQQ9UN88 632 aa20.15■□□□□ 0.82
DDX55-202ENST00000354291 INPP5BP32019 993 aa20.14■□□□□ 0.81
DDX55-202ENST00000354291 CHAF1AQ13111 956 aaPredicted RBP20.14■□□□□ 0.81
DDX55-202ENST00000354291 DCAF15Q66K64 600 aa20.14■□□□□ 0.81
DDX55-202ENST00000354291 LMBR1LQ6UX01 489 aa20.14■□□□□ 0.81
DDX55-202ENST00000354291 LINS1Q8NG48 757 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms