RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 MTX1Q13505 466 aa17.98■□□□□ 0.47
HMGN3-202ENST00000344726 CAVIN4Q5BKX8 364 aa17.98■□□□□ 0.47
HMGN3-202ENST00000344726 VPS37DQ86XT2 251 aa17.98■□□□□ 0.47
HMGN3-202ENST00000344726 CASP8AP2Q9UKL3 1982 aa17.97■□□□□ 0.47
HMGN3-202ENST00000344726 SRGAP3O43295 1099 aa17.97■□□□□ 0.47
HMGN3-202ENST00000344726 CA12O43570 354 aa17.97■□□□□ 0.47
HMGN3-202ENST00000344726 IFIT1P09914 478 aaKnown RBP17.97■□□□□ 0.47
HMGN3-202ENST00000344726 LPIN2Q92539 896 aa17.97■□□□□ 0.47
HMGN3-202ENST00000344726 SERPINA10Q9UK55 444 aa17.97■□□□□ 0.47
HMGN3-202ENST00000344726 GNAI2P04899 355 aa17.96■□□□□ 0.47
HMGN3-202ENST00000344726 SLC5A1P13866 664 aa17.96■□□□□ 0.47
HMGN3-202ENST00000344726 IL15P40933 162 aaPredicted RBP17.96■□□□□ 0.47
HMGN3-202ENST00000344726 CRKP46108 304 aa17.96■□□□□ 0.47
HMGN3-202ENST00000344726 RBM5P52756 815 aaKnown RBP eCLIP17.96■□□□□ 0.47
HMGN3-202ENST00000344726 TTLL12Q14166 644 aaPredicted RBP17.96■□□□□ 0.47
HMGN3-202ENST00000344726 ATP2B3Q16720 1220 aa17.96■□□□□ 0.47
HMGN3-202ENST00000344726 CDAN1Q8IWY9 1227 aa17.96■□□□□ 0.47
HMGN3-202ENST00000344726 VEZTQ9HBM0 779 aa17.96■□□□□ 0.47
HMGN3-202ENST00000344726 RNF186Q9NXI6 227 aa17.96■□□□□ 0.47
HMGN3-202ENST00000344726 CEP126Q9P2H0 1117 aa17.96■□□□□ 0.47
HMGN3-202ENST00000344726 OTOFQ9HC10 1997 aa17.95■□□□□ 0.46
HMGN3-202ENST00000344726 PNMA6EA0A0J9YXQ4 647 aa17.95■□□□□ 0.46
HMGN3-202ENST00000344726 NF2P35240 595 aa17.95■□□□□ 0.46
HMGN3-202ENST00000344726 SPDYE2Q495Y8 402 aa17.95■□□□□ 0.46
HMGN3-202ENST00000344726 LDLRAD1Q5T700 205 aa17.95■□□□□ 0.46
HMGN3-202ENST00000344726 NBPF12Q5TAG4 269 aaPredicted RBP17.95■□□□□ 0.46
HMGN3-202ENST00000344726 TDRD3Q9H7E2 651 aaKnown RBP17.95■□□□□ 0.46
HMGN3-202ENST00000344726 ZNF70Q9UC06 446 aaPredicted RBP17.95■□□□□ 0.46
HMGN3-202ENST00000344726 ANGEL1Q9UNK9 670 aaKnown RBP17.95■□□□□ 0.46
HMGN3-202ENST00000344726 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.95■□□□□ 0.46
HMGN3-202ENST00000344726 AKAP11Q9UKA4 1901 aa17.95■□□□□ 0.46
HMGN3-202ENST00000344726 MYO1BO43795 1136 aa17.94■□□□□ 0.46
HMGN3-202ENST00000344726 FRAT2O75474 233 aaPredicted RBP17.94■□□□□ 0.46
HMGN3-202ENST00000344726 RASA3Q14644 834 aa17.94■□□□□ 0.46
HMGN3-202ENST00000344726 DZIP1LQ8IYY4 767 aaKnown RBP17.94■□□□□ 0.46
HMGN3-202ENST00000344726 SAGE1Q9NXZ1 904 aa17.94■□□□□ 0.46
HMGN3-202ENST00000344726 PPP2R3BQ9Y5P8 575 aa17.94■□□□□ 0.46
HMGN3-202ENST00000344726 TRPA1O75762 1119 aa17.93■□□□□ 0.46
HMGN3-202ENST00000344726 ADORA1P30542 326 aa17.93■□□□□ 0.46
HMGN3-202ENST00000344726 MKRN3Q13064 507 aaKnown RBP17.93■□□□□ 0.46
HMGN3-202ENST00000344726 FTSJ3Q8IY81 847 aaKnown RBP17.93■□□□□ 0.46
HMGN3-202ENST00000344726 LAMB1P07942 1786 aa17.92■□□□□ 0.46
HMGN3-202ENST00000344726 MAP3K11Q16584 847 aa17.92■□□□□ 0.46
HMGN3-202ENST00000344726 ARMC9Q7Z3E5 817 aa17.92■□□□□ 0.46
HMGN3-202ENST00000344726 TBC1D22AQ8WUA7 517 aa17.92■□□□□ 0.46
HMGN3-202ENST00000344726 ABHD8Q96I13 439 aa17.92■□□□□ 0.46
HMGN3-202ENST00000344726 CLMNQ96JQ2 1002 aa17.92■□□□□ 0.46
HMGN3-202ENST00000344726 TEPSINQ96N21 525 aa17.92■□□□□ 0.46
HMGN3-202ENST00000344726 C1orf115Q9H7X2 142 aa17.92■□□□□ 0.46
HMGN3-202ENST00000344726 ZBTB7BO15156 539 aaPredicted RBP17.91■□□□□ 0.46
HMGN3-202ENST00000344726 PHKA1P46020 1223 aa17.91■□□□□ 0.46
HMGN3-202ENST00000344726 CACNB3P54284 484 aa17.91■□□□□ 0.46
HMGN3-202ENST00000344726 TFCP2Q12800 502 aa17.91■□□□□ 0.46
HMGN3-202ENST00000344726 ITPRIPQ8IWB1 547 aa17.91■□□□□ 0.46
HMGN3-202ENST00000344726 TCP10L2B9ZVM9 353 aa17.9■□□□□ 0.46
HMGN3-202ENST00000344726 ATXN8OSP0DMR3 200 aa17.9■□□□□ 0.46
HMGN3-202ENST00000344726 TIMM10P62072 90 aa17.9■□□□□ 0.46
HMGN3-202ENST00000344726 PANK1Q8TE04 598 aa17.9■□□□□ 0.46
HMGN3-202ENST00000344726 TMEM39BQ9GZU3 492 aa17.9■□□□□ 0.46
HMGN3-202ENST00000344726 USP2O75604 605 aaPredicted RBP17.89■□□□□ 0.45
HMGN3-202ENST00000344726 HDLBPQ00341 1268 aaKnown RBP17.89■□□□□ 0.45
HMGN3-202ENST00000344726 POLA2Q14181 598 aa17.89■□□□□ 0.45
HMGN3-202ENST00000344726 SPRYD7Q5W111 196 aa17.89■□□□□ 0.45
HMGN3-202ENST00000344726 APOBEC3HQ6NTF7 200 aaKnown RBP17.89■□□□□ 0.45
HMGN3-202ENST00000344726 TEKT1Q969V4 418 aa17.89■□□□□ 0.45
HMGN3-202ENST00000344726 ZDHHC15Q96MV8 337 aa17.89■□□□□ 0.45
HMGN3-202ENST00000344726 MYH2Q9UKX2 1941 aa17.89■□□□□ 0.45
HMGN3-202ENST00000344726 A0A1B0GUL7 405 aa17.88■□□□□ 0.45
HMGN3-202ENST00000344726 PRDX5P30044 214 aa17.88■□□□□ 0.45
HMGN3-202ENST00000344726 TM4SF4P48230 202 aa17.88■□□□□ 0.45
HMGN3-202ENST00000344726 ATP8B2P98198 1209 aa17.88■□□□□ 0.45
HMGN3-202ENST00000344726 SUPT20HL1Q3ZLR7 823 aa17.88■□□□□ 0.45
HMGN3-202ENST00000344726 CCDC102BQ68D86 513 aa17.88■□□□□ 0.45
HMGN3-202ENST00000344726 REM2Q8IYK8 340 aaPredicted RBP17.88■□□□□ 0.45
HMGN3-202ENST00000344726 SSH3Q8TE77 659 aa17.88■□□□□ 0.45
HMGN3-202ENST00000344726 MCOLN1Q9GZU1 580 aa17.88■□□□□ 0.45
HMGN3-202ENST00000344726 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.88■□□□□ 0.45
HMGN3-202ENST00000344726 GJA5P36382 358 aa17.87■□□□□ 0.45
HMGN3-202ENST00000344726 DIXDC1Q155Q3 683 aa17.87■□□□□ 0.45
HMGN3-202ENST00000344726 WDR66Q8TBY9 1149 aa17.87■□□□□ 0.45
HMGN3-202ENST00000344726 XAGE2Q96GT9 111 aa17.87■□□□□ 0.45
HMGN3-202ENST00000344726 MRIQ9BWK5 157 aa17.87■□□□□ 0.45
HMGN3-202ENST00000344726 SUGT1Q9Y2Z0 365 aa17.87■□□□□ 0.45
HMGN3-202ENST00000344726 PPP1R12BO60237 982 aaPredicted RBP17.86■□□□□ 0.45
HMGN3-202ENST00000344726 TBC1D8O95759 1140 aa17.86■□□□□ 0.45
HMGN3-202ENST00000344726 TNFAIP1Q13829 316 aa17.86■□□□□ 0.45
HMGN3-202ENST00000344726 WNK4Q96J92 1243 aa17.86■□□□□ 0.45
HMGN3-202ENST00000344726 GNL3LQ9NVN8 582 aaKnown RBP17.86■□□□□ 0.45
HMGN3-202ENST00000344726 MAST3O60307 1309 aa17.85■□□□□ 0.45
HMGN3-202ENST00000344726 G3BP1Q13283 466 aaKnown RBP eCLIP17.85■□□□□ 0.45
HMGN3-202ENST00000344726 DGKZQ13574 1117 aa17.85■□□□□ 0.45
HMGN3-202ENST00000344726 RASGRF1Q13972 1273 aa17.85■□□□□ 0.45
HMGN3-202ENST00000344726 HHIPL2Q6UWX4 724 aa17.85■□□□□ 0.45
HMGN3-202ENST00000344726 R3HDMLQ9H3Y0 253 aa17.85■□□□□ 0.45
HMGN3-202ENST00000344726 SALL1Q9NSC2 1324 aa17.85■□□□□ 0.45
HMGN3-202ENST00000344726 RCAN3Q9UKA8 241 aa17.85■□□□□ 0.45
HMGN3-202ENST00000344726 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
HMGN3-202ENST00000344726 AKAP2Q9Y2D5 859 aa17.85■□□□□ 0.45
HMGN3-202ENST00000344726 DAGLAQ9Y4D2 1042 aa17.85■□□□□ 0.45
HMGN3-202ENST00000344726 SEMA3EO15041 775 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms