RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 HMGB1P09429 215 aaKnown RBP11.94□□□□□ -0.5
RBFOX1-202ENST00000340209 AATFQ9NY61 560 aaKnown RBP eCLIP11.94□□□□□ -0.5
RBFOX1-202ENST00000340209 ISY1Q9ULR0 285 aaKnown RBP11.94□□□□□ -0.5
RBFOX1-202ENST00000340209 TCHHQ07283 1943 aa11.94□□□□□ -0.5
RBFOX1-202ENST00000340209 EPB41L2O43491 1005 aaKnown RBP11.94□□□□□ -0.5
RBFOX1-202ENST00000340209 RPS8P62241 208 aaKnown RBP11.94□□□□□ -0.5
RBFOX1-202ENST00000340209 CNBD1Q8NA66 436 aa11.94□□□□□ -0.5
RBFOX1-202ENST00000340209 N4BP2Q86UW6 1770 aaPredicted RBP11.94□□□□□ -0.5
RBFOX1-202ENST00000340209 LAMB4A4D0S4 1761 aa11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 F8W031 263 aaPredicted RBP11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 PDIA3P30101 505 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 VGLL2Q8N8G2 317 aa11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 UBE2Q2LH0YL09 131 aa11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 C8orf76Q96K31 380 aa11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 NACAP1Q9BZK3 213 aa11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 COL16A1Q07092 1604 aaPredicted RBP11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 CCDC69A6NI79 296 aa11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 LIG1P18858 919 aa11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 METAP2P50579 478 aaKnown RBP eCLIP11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 NAA16Q6N069 864 aaPredicted RBP11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 RPGRQ92834 1020 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 SHANK3Q9BYB0 1731 aa11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 NEDD4P46934 1319 aa11.93□□□□□ -0.5
RBFOX1-202ENST00000340209 CYB5R4Q7L1T6 521 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 NSUN7Q8NE18 718 aaKnown RBP11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 MINPP1Q9UNW1 487 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 GOLGA8AA7E2F4 631 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 UBE2HP62256 183 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 MFSD6Q6ZSS7 791 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 IFNL3Q8IZI9 196 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 DACT1Q9NYF0 836 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 USP25Q9UHP3 1055 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 C6orf229H3BNL8 230 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 CSPP1Q1MSJ5 1256 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 SYNE3Q6ZMZ3 975 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 TXNRD3Q86VQ6 643 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 DZIP1Q86YF9 867 aaKnown RBP11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 SLC26A6Q9BXS9 759 aa11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 RRAGDQ9NQL2 400 aaPredicted RBP11.92□□□□□ -0.5
RBFOX1-202ENST00000340209 ERICH2A1L162 156 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 LRSAM1Q6UWE0 723 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 ADGRA1Q86SQ6 560 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 KIF3AQ9Y496 699 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 MAGEB6P1A0A0J9YX57 407 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 FOXP2O15409 715 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 PRDX5P30044 214 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 FBXO3Q9UK99 471 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 RPS6KA4O75676 772 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 EVX2Q03828 476 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 STRBPQ96SI9 672 aaKnown RBP11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 UBAC1Q9BSL1 405 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 EPB41L4AQ9HCS5 686 aaPredicted RBP11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 NFIXQ14938 502 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 CCDC183Q5T5S1 534 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 SPC24Q8NBT2 197 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 NAP1L5Q96NT1 182 aaPredicted RBP11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 LRRC4BQ9NT99 713 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 NARFQ9UHQ1 456 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 SLC12A7Q9Y666 1083 aa11.91□□□□□ -0.5
RBFOX1-202ENST00000340209 RAD21O60216 631 aa11.9□□□□□ -0.5
RBFOX1-202ENST00000340209 ANTXR2P58335 489 aa11.9□□□□□ -0.5
RBFOX1-202ENST00000340209 STK38Q15208 465 aa11.9□□□□□ -0.5
RBFOX1-202ENST00000340209 KCNB2Q92953 911 aa11.9□□□□□ -0.5
RBFOX1-202ENST00000340209 TNMDQ9H2S6 317 aa11.9□□□□□ -0.5
RBFOX1-202ENST00000340209 SRCAPQ6ZRS2 3230 aa11.9□□□□□ -0.5
RBFOX1-202ENST00000340209 PFKFB2O60825 505 aa11.9□□□□□ -0.5
RBFOX1-202ENST00000340209 CTDNEP1O95476 244 aa11.9□□□□□ -0.5
RBFOX1-202ENST00000340209 MARCKSP29966 332 aaPredicted RBP11.9□□□□□ -0.5
RBFOX1-202ENST00000340209 CERKQ8TCT0 537 aa11.9□□□□□ -0.5
RBFOX1-202ENST00000340209 BAZ2BQ9UIF8 2168 aaKnown RBP11.9□□□□□ -0.5
RBFOX1-202ENST00000340209 G3V3G9 751 aa11.9□□□□□ -0.51
RBFOX1-202ENST00000340209 HIBADHP31937 336 aaKnown RBP11.9□□□□□ -0.51
RBFOX1-202ENST00000340209 DIXDC1Q155Q3 683 aa11.9□□□□□ -0.51
RBFOX1-202ENST00000340209 DCAF8Q5TAQ9 597 aa11.9□□□□□ -0.51
RBFOX1-202ENST00000340209 ISM2Q6H9L7 571 aa11.9□□□□□ -0.51
RBFOX1-202ENST00000340209 NUP62CLQ9H1M0 184 aa11.9□□□□□ -0.51
RBFOX1-202ENST00000340209 MYH14Q7Z406 1995 aaKnown RBP11.9□□□□□ -0.51
RBFOX1-202ENST00000340209 BCL9LQ86UU0 1499 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 TJP1Q07157 1748 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 ZBTB43O43298 467 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 CPLX2Q6PUV4 134 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 NYXQ9GZU5 481 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 FAM47AQ5JRC9 791 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 LEO1Q8WVC0 666 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 ZNF830Q96NB3 372 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 SAP30BPQ9UHR5 308 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 TRPC5Q9UL62 973 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 UTRNP46939 3433 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 FGFR2P21802 821 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 MSNP26038 577 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 ARID4AP29374 1257 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 TRIM29Q14134 588 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 UBE3CQ15386 1083 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 OLFM4Q6UX06 510 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 DRC7Q8IY82 874 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 USP28Q96RU2 1077 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 ALG1Q9BT22 464 aa11.89□□□□□ -0.51
RBFOX1-202ENST00000340209 ANGEL1Q9UNK9 670 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms