RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 CDK5RAP3Q96JB5 506 aa15.02■□□□□ -0
COL2A1-201ENST00000337299 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.02■□□□□ -0
COL2A1-201ENST00000337299 DBF4Q9UBU7 674 aaPredicted RBP15.02■□□□□ -0
COL2A1-201ENST00000337299 ABCA8O94911 1581 aa15.02■□□□□ -0
COL2A1-201ENST00000337299 TMCO5BA8MYB1 307 aa15.02□□□□□ -0.01
COL2A1-201ENST00000337299 SSRP1Q08945 709 aaKnown RBP15.02□□□□□ -0.01
COL2A1-201ENST00000337299 ZFYVE27Q5T4F4 411 aa15.02□□□□□ -0.01
COL2A1-201ENST00000337299 ANO1Q5XXA6 986 aa15.02□□□□□ -0.01
COL2A1-201ENST00000337299 CNNM1Q9NRU3 951 aa15.02□□□□□ -0.01
COL2A1-201ENST00000337299 EIF2AK4Q9P2K8 1649 aaKnown RBP15.02□□□□□ -0.01
COL2A1-201ENST00000337299 KIF4AO95239 1232 aa15.02□□□□□ -0.01
COL2A1-201ENST00000337299 ALS2CR12Q96Q35 445 aa15.02□□□□□ -0.01
COL2A1-201ENST00000337299 PCDHA7Q9UN72 937 aa15.02□□□□□ -0.01
COL2A1-201ENST00000337299 YTHDC2Q9H6S0 1430 aaKnown RBP15.02□□□□□ -0.01
COL2A1-201ENST00000337299 SMIM23A6NLE4 172 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 PRC1O43663 620 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 TUBBP07437 444 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 IDEP14735 1019 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 LRCH2Q5VUJ6 765 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 PNMA8AQ86V59 439 aaPredicted RBP15.01□□□□□ -0.01
COL2A1-201ENST00000337299 PLA2G4DQ86XP0 818 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 WASF1Q92558 559 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 TRIM47Q96LD4 638 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 NLRP1Q9C000 1473 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 KRT86O43790 486 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 RNF40O75150 1001 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 SPECC1LQ69YQ0 1117 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 CDC25BP30305 580 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 UBXN1Q04323 297 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 KIF5AQ12840 1032 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 CCDC57Q2TAC2 916 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 SLFNL1Q499Z3 407 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 BAIAP2L1Q9UHR4 511 aa15.01□□□□□ -0.01
COL2A1-201ENST00000337299 CHL1O00533 1208 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 RPSAP08865 295 aaKnown RBP15□□□□□ -0.01
COL2A1-201ENST00000337299 CYLC1P35663 651 aaPredicted RBP15□□□□□ -0.01
COL2A1-201ENST00000337299 E2F5Q15329 346 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 SRLQ86TD4 932 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 VPS37DQ86XT2 251 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 RSRC1Q96IZ7 334 aaKnown RBP15□□□□□ -0.01
COL2A1-201ENST00000337299 SEPT11Q9NVA2 429 aaKnown RBP15□□□□□ -0.01
COL2A1-201ENST00000337299 A0A087WZG4 1122 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 A0A0D9SFI3 127 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 CCDC151A5D8V7 595 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 RBM6P78332 1123 aaKnown RBP15□□□□□ -0.01
COL2A1-201ENST00000337299 TMEM67Q5HYA8 995 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 CEP85LQ5SZL2 805 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 AIDAQ96BJ3 306 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 NAA15Q9BXJ9 866 aaKnown RBP15□□□□□ -0.01
COL2A1-201ENST00000337299 TM6SF1Q9BZW5 370 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 GCKP35557 465 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 VAV2P52735 878 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 NCOA7Q8NI08 942 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 FAM71BQ8TC56 605 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 STAMQ92783 540 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 FAM212AQ96EL1 285 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 ABCB6Q9NP58 842 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 INCENPQ9NQS7 918 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 KCNH3Q9ULD8 1083 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 TLDC2A0PJX2 215 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 MINDY4BA8MYZ0 360 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 SLC39A6Q13433 755 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 PRPF4BQ13523 1007 aaKnown RBP15□□□□□ -0.01
COL2A1-201ENST00000337299 KCTD16Q68DU8 428 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 CNGA4Q8IV77 575 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 EFCAB13Q8IY85 973 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 EHBP1Q8NDI1 1231 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 SEC62Q99442 399 aaKnown RBP15□□□□□ -0.01
COL2A1-201ENST00000337299 EYA1Q99502 592 aa15□□□□□ -0.01
COL2A1-201ENST00000337299 SBNO2Q9Y2G9 1366 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 A0A087WUV0 522 aaPredicted RBP14.99□□□□□ -0.01
COL2A1-201ENST00000337299 POLR2DO15514 142 aaKnown RBP14.99□□□□□ -0.01
COL2A1-201ENST00000337299 ATP8B1O43520 1251 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 PFKFB1P16118 471 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 KRT9P35527 623 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 NOP2P46087 812 aaKnown RBP14.99□□□□□ -0.01
COL2A1-201ENST00000337299 MCTP2Q6DN12 878 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 SRGAP1Q7Z6B7 1085 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 PGBD1Q96JS3 809 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 CTAGE1Q96RT6 745 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 ORAI2Q96SN7 254 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 ANKRD24Q8TF21 1146 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 OSBPL3Q9H4L5 887 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 PPANQ9NQ55 473 aaKnown RBP14.99□□□□□ -0.01
COL2A1-201ENST00000337299 MAP3K19Q56UN5 1328 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 MICAL1Q8TDZ2 1067 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 SLC24A3Q9HC58 644 aa14.99□□□□□ -0.01
COL2A1-201ENST00000337299 ENC1O14682 589 aa14.98□□□□□ -0.01
COL2A1-201ENST00000337299 IL13P35225 146 aa14.98□□□□□ -0.01
COL2A1-201ENST00000337299 TUBB4BP68371 445 aa14.98□□□□□ -0.01
COL2A1-201ENST00000337299 USP44Q9H0E7 712 aa14.98□□□□□ -0.01
COL2A1-201ENST00000337299 LUC7L2Q9Y383 392 aaKnown RBP14.98□□□□□ -0.01
COL2A1-201ENST00000337299 TACC1O75410 805 aa14.98□□□□□ -0.01
COL2A1-201ENST00000337299 MMS22LQ6ZRQ5 1243 aa14.98□□□□□ -0.01
COL2A1-201ENST00000337299 CAPS2Q9BXY5 557 aa14.98□□□□□ -0.01
COL2A1-201ENST00000337299 GNL3LQ9NVN8 582 aaKnown RBP14.98□□□□□ -0.01
COL2A1-201ENST00000337299 CASP8Q14790 479 aa14.98□□□□□ -0.01
COL2A1-201ENST00000337299 SLC35F6Q8N357 371 aa14.98□□□□□ -0.01
COL2A1-201ENST00000337299 CABS1Q96KC9 395 aa14.98□□□□□ -0.01
COL2A1-201ENST00000337299 NAPBQ9H115 298 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms