RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 SPDYE2Q495Y8 402 aa18.46■□□□□ 0.55
KATNA1-201ENST00000335643 NEUROD6Q96NK8 337 aa18.46■□□□□ 0.55
KATNA1-201ENST00000335643 VEZTQ9HBM0 779 aa18.46■□□□□ 0.55
KATNA1-201ENST00000335643 ZBTB40Q9NUA8 1239 aa18.46■□□□□ 0.55
KATNA1-201ENST00000335643 ZNF70Q9UC06 446 aaPredicted RBP18.46■□□□□ 0.55
KATNA1-201ENST00000335643 AKAP2Q9Y2D5 859 aa18.46■□□□□ 0.55
KATNA1-201ENST00000335643 FAM155AB1AL88 458 aaPredicted RBP18.45■□□□□ 0.54
KATNA1-201ENST00000335643 MS4A1P11836 297 aa18.45■□□□□ 0.54
KATNA1-201ENST00000335643 ECE1P42892 770 aa18.45■□□□□ 0.54
KATNA1-201ENST00000335643 WBP1LQ9NX94 342 aa18.45■□□□□ 0.54
KATNA1-201ENST00000335643 NOP58Q9Y2X3 529 aaKnown RBP18.45■□□□□ 0.54
KATNA1-201ENST00000335643 FOXN1O15353 648 aa18.44■□□□□ 0.54
KATNA1-201ENST00000335643 RGMBQ6NW40 437 aa18.44■□□□□ 0.54
KATNA1-201ENST00000335643 PI16Q6UXB8 463 aa18.44■□□□□ 0.54
KATNA1-201ENST00000335643 CDAN1Q8IWY9 1227 aa18.44■□□□□ 0.54
KATNA1-201ENST00000335643 SIRT2Q8IXJ6 389 aa18.44■□□□□ 0.54
KATNA1-201ENST00000335643 WDR66Q8TBY9 1149 aa18.44■□□□□ 0.54
KATNA1-201ENST00000335643 MYO1BO43795 1136 aa18.43■□□□□ 0.54
KATNA1-201ENST00000335643 CACNB3P54284 484 aa18.43■□□□□ 0.54
KATNA1-201ENST00000335643 PRKG1Q13976 671 aa18.43■□□□□ 0.54
KATNA1-201ENST00000335643 DIXDC1Q155Q3 683 aa18.43■□□□□ 0.54
KATNA1-201ENST00000335643 APOBEC3HQ6NTF7 200 aaKnown RBP18.43■□□□□ 0.54
KATNA1-201ENST00000335643 GNL3LQ9NVN8 582 aaKnown RBP18.43■□□□□ 0.54
KATNA1-201ENST00000335643 DENND2AQ9ULE3 1009 aa18.43■□□□□ 0.54
KATNA1-201ENST00000335643 DDX19BQ9UMR2 479 aa18.43■□□□□ 0.54
KATNA1-201ENST00000335643 SALL1Q9NSC2 1324 aa18.43■□□□□ 0.54
KATNA1-201ENST00000335643 UBE2Q2LH0YL09 131 aa18.42■□□□□ 0.54
KATNA1-201ENST00000335643 SEMA3EO15041 775 aa18.42■□□□□ 0.54
KATNA1-201ENST00000335643 ZBTB22O15209 634 aa18.42■□□□□ 0.54
KATNA1-201ENST00000335643 HDLBPQ00341 1268 aaKnown RBP18.42■□□□□ 0.54
KATNA1-201ENST00000335643 RASA3Q14644 834 aa18.42■□□□□ 0.54
KATNA1-201ENST00000335643 TNNI3KQ59H18 835 aa18.42■□□□□ 0.54
KATNA1-201ENST00000335643 TEKT1Q969V4 418 aa18.42■□□□□ 0.54
KATNA1-201ENST00000335643 ZDHHC15Q96MV8 337 aa18.42■□□□□ 0.54
KATNA1-201ENST00000335643 EXOC6BQ9Y2D4 811 aa18.42■□□□□ 0.54
KATNA1-201ENST00000335643 SUGT1Q9Y2Z0 365 aa18.42■□□□□ 0.54
KATNA1-201ENST00000335643 FPGT-TNNI3KV9GXZ4 949 aa18.42■□□□□ 0.54
KATNA1-201ENST00000335643 AKAP11Q9UKA4 1901 aa18.42■□□□□ 0.54
KATNA1-201ENST00000335643 ZNF157P51786 506 aaPredicted RBP18.42■□□□□ 0.54
KATNA1-201ENST00000335643 OS9Q13438 667 aaPredicted RBP18.42■□□□□ 0.54
KATNA1-201ENST00000335643 NBPF12Q5TAG4 269 aaPredicted RBP18.42■□□□□ 0.54
KATNA1-201ENST00000335643 TLR7Q9NYK1 1049 aaKnown RBP18.42■□□□□ 0.54
KATNA1-201ENST00000335643 MYH2Q9UKX2 1941 aa18.41■□□□□ 0.54
KATNA1-201ENST00000335643 TCP10L2B9ZVM9 353 aa18.41■□□□□ 0.54
KATNA1-201ENST00000335643 FKBP1BP68106 108 aa18.41■□□□□ 0.54
KATNA1-201ENST00000335643 PDE3AQ14432 1141 aa18.41■□□□□ 0.54
KATNA1-201ENST00000335643 TEPSINQ96N21 525 aa18.41■□□□□ 0.54
KATNA1-201ENST00000335643 DBNDD2Q9BQY9 259 aa18.41■□□□□ 0.54
KATNA1-201ENST00000335643 MRIQ9BWK5 157 aa18.41■□□□□ 0.54
KATNA1-201ENST00000335643 HMG20BQ9P0W2 317 aa18.41■□□□□ 0.54
KATNA1-201ENST00000335643 DAGLAQ9Y4D2 1042 aa18.41■□□□□ 0.54
KATNA1-201ENST00000335643 OTOFQ9HC10 1997 aa18.41■□□□□ 0.54
KATNA1-201ENST00000335643 SLC10A3P09131 477 aa18.4■□□□□ 0.54
KATNA1-201ENST00000335643 ARID4AP29374 1257 aaPredicted RBP18.4■□□□□ 0.54
KATNA1-201ENST00000335643 MAP2K2P36507 400 aa18.4■□□□□ 0.54
KATNA1-201ENST00000335643 COL13A1Q5TAT6 717 aaPredicted RBP18.4■□□□□ 0.54
KATNA1-201ENST00000335643 HHIPL2Q6UWX4 724 aa18.4■□□□□ 0.54
KATNA1-201ENST00000335643 GPR108Q9NPR9 543 aa18.4■□□□□ 0.54
KATNA1-201ENST00000335643 MAST3O60307 1309 aa18.4■□□□□ 0.54
KATNA1-201ENST00000335643 PDS5AQ29RF7 1337 aaKnown RBP18.4■□□□□ 0.54
KATNA1-201ENST00000335643 LDHBP07195 334 aaKnown RBP18.39■□□□□ 0.53
KATNA1-201ENST00000335643 MCAMP43121 646 aa18.39■□□□□ 0.53
KATNA1-201ENST00000335643 TTLL12Q14166 644 aaPredicted RBP18.39■□□□□ 0.53
KATNA1-201ENST00000335643 RASAL3Q86YV0 1011 aa18.39■□□□□ 0.53
KATNA1-201ENST00000335643 ZNF384Q8TF68 577 aa18.39■□□□□ 0.53
KATNA1-201ENST00000335643 EAF2Q96CJ1 260 aaPredicted RBP18.39■□□□□ 0.53
KATNA1-201ENST00000335643 TMEM39BQ9GZU3 492 aa18.39■□□□□ 0.53
KATNA1-201ENST00000335643 PPP2R3BQ9Y5P8 575 aa18.39■□□□□ 0.53
KATNA1-201ENST00000335643 MYO5AQ9Y4I1 1855 aaKnown RBP18.39■□□□□ 0.53
KATNA1-201ENST00000335643 NF2P35240 595 aa18.38■□□□□ 0.53
KATNA1-201ENST00000335643 MAP2K1Q02750 393 aaPredicted RBP18.38■□□□□ 0.53
KATNA1-201ENST00000335643 TBC1D9Q6ZT07 1266 aa18.38■□□□□ 0.53
KATNA1-201ENST00000335643 ABCF2Q9UG63 623 aa18.38■□□□□ 0.53
KATNA1-201ENST00000335643 DBNLQ9UJU6 430 aaKnown RBP18.38■□□□□ 0.53
KATNA1-201ENST00000335643 NOGQ13253 232 aa18.38■□□□□ 0.53
KATNA1-201ENST00000335643 GORABQ5T7V8 394 aa18.38■□□□□ 0.53
KATNA1-201ENST00000335643 SPATA5Q8NB90 893 aa18.38■□□□□ 0.53
KATNA1-201ENST00000335643 CCDC8Q9H0W5 538 aaPredicted RBP18.38■□□□□ 0.53
KATNA1-201ENST00000335643 ANGEL1Q9UNK9 670 aaKnown RBP18.38■□□□□ 0.53
KATNA1-201ENST00000335643 KIF23Q02241 960 aaPredicted RBP18.37■□□□□ 0.53
KATNA1-201ENST00000335643 RPAP2Q8IXW5 612 aaPredicted RBP18.37■□□□□ 0.53
KATNA1-201ENST00000335643 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.37■□□□□ 0.53
KATNA1-201ENST00000335643 TSKSQ9UJT2 592 aa18.37■□□□□ 0.53
KATNA1-201ENST00000335643 TNFAIP1Q13829 316 aa18.36■□□□□ 0.53
KATNA1-201ENST00000335643 LDLRAD1Q5T700 205 aa18.36■□□□□ 0.53
KATNA1-201ENST00000335643 CDC42EP5Q6NZY7 148 aa18.36■□□□□ 0.53
KATNA1-201ENST00000335643 CCDC102AQ96A19 550 aa18.36■□□□□ 0.53
KATNA1-201ENST00000335643 SNRKQ9NRH2 765 aa18.36■□□□□ 0.53
KATNA1-201ENST00000335643 HSPA8P11142 646 aaKnown RBP18.35■□□□□ 0.53
KATNA1-201ENST00000335643 NFIAQ12857 509 aa18.35■□□□□ 0.53
KATNA1-201ENST00000335643 MAP3K11Q16584 847 aa18.35■□□□□ 0.53
KATNA1-201ENST00000335643 AIDAQ96BJ3 306 aa18.35■□□□□ 0.53
KATNA1-201ENST00000335643 CLMNQ96JQ2 1002 aa18.35■□□□□ 0.53
KATNA1-201ENST00000335643 IL1RAPL2Q9NP60 686 aa18.35■□□□□ 0.53
KATNA1-201ENST00000335643 GAKO14976 1311 aa18.34■□□□□ 0.53
KATNA1-201ENST00000335643 APBB1O00213 710 aa18.34■□□□□ 0.53
KATNA1-201ENST00000335643 USP2O75604 605 aaPredicted RBP18.34■□□□□ 0.53
KATNA1-201ENST00000335643 LBX1P52954 281 aa18.34■□□□□ 0.53
KATNA1-201ENST00000335643 MECOMQ03112 1051 aa18.34■□□□□ 0.53
KATNA1-201ENST00000335643 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms