RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 RILPL1Q5EBL4 403 aa16.83■□□□□ 0.28
TCOF1-201ENST00000323668 CDC5LQ99459 802 aaKnown RBP16.83■□□□□ 0.28
TCOF1-201ENST00000323668 ZHX3Q9H4I2 956 aa16.83■□□□□ 0.28
TCOF1-201ENST00000323668 REREQ9P2R6 1566 aa16.83■□□□□ 0.28
TCOF1-201ENST00000323668 USP5P45974 858 aa16.83■□□□□ 0.28
TCOF1-201ENST00000323668 STX17P56962 302 aa16.83■□□□□ 0.28
TCOF1-201ENST00000323668 PCDHA7Q9UN72 937 aa16.83■□□□□ 0.28
TCOF1-201ENST00000323668 ABCA9Q8IUA7 1624 aa16.83■□□□□ 0.28
TCOF1-201ENST00000323668 KRT40Q6A162 431 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 CACTINQ8WUQ7 758 aaKnown RBP16.82■□□□□ 0.28
TCOF1-201ENST00000323668 RMND1Q9NWS8 449 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 ZNF215Q9UL58 517 aaPredicted RBP16.82■□□□□ 0.28
TCOF1-201ENST00000323668 ADCY9O60503 1353 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 ADGRB1O14514 1584 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 CTAGE15A4D2H0 777 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 USO1O60763 962 aaKnown RBP16.82■□□□□ 0.28
TCOF1-201ENST00000323668 CUTAO60888 179 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 CTAGE8P0CG41 777 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 GNAT2P19087 354 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 EVCP57679 992 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 IFIT1BQ5T764 474 aaKnown RBP16.82■□□□□ 0.28
TCOF1-201ENST00000323668 CTAGE6Q86UF2 777 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 CTAGE4Q8IX94 777 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 IRS4O14654 1257 aaPredicted RBP16.82■□□□□ 0.28
TCOF1-201ENST00000323668 LZTFL1Q9NQ48 299 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 RCOR1Q9UKL0 485 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 CEP112Q8N8E3 955 aa16.82■□□□□ 0.28
TCOF1-201ENST00000323668 GOLGA6L10A6NI86 522 aa16.81■□□□□ 0.28
TCOF1-201ENST00000323668 TSPY2A6NKD2 308 aa16.81■□□□□ 0.28
TCOF1-201ENST00000323668 EXOC5O00471 708 aa16.81■□□□□ 0.28
TCOF1-201ENST00000323668 PDIA3P30101 505 aaKnown RBP16.81■□□□□ 0.28
TCOF1-201ENST00000323668 MTIF2P46199 727 aaKnown RBP16.81■□□□□ 0.28
TCOF1-201ENST00000323668 MAGEB6Q8N7X4 407 aa16.81■□□□□ 0.28
TCOF1-201ENST00000323668 ZNF287Q9HBT7 754 aa16.81■□□□□ 0.28
TCOF1-201ENST00000323668 TCP11L1Q9NUJ3 509 aa16.81■□□□□ 0.28
TCOF1-201ENST00000323668 PRAMEF22A3QJZ6 481 aa16.81■□□□□ 0.28
TCOF1-201ENST00000323668 IQSEC3Q9UPP2 1182 aaPredicted RBP16.81■□□□□ 0.28
TCOF1-201ENST00000323668 IL2RBP14784 551 aa16.81■□□□□ 0.28
TCOF1-201ENST00000323668 ZAP70P43403 619 aa16.81■□□□□ 0.28
TCOF1-201ENST00000323668 ATP2B2Q01814 1243 aa16.81■□□□□ 0.28
TCOF1-201ENST00000323668 NSUN7Q8NE18 718 aaKnown RBP16.81■□□□□ 0.28
TCOF1-201ENST00000323668 CTAGE9A4FU28 777 aa16.8■□□□□ 0.28
TCOF1-201ENST00000323668 ARHGAP6O43182 974 aa16.8■□□□□ 0.28
TCOF1-201ENST00000323668 CCDC152Q4G0S7 254 aa16.8■□□□□ 0.28
TCOF1-201ENST00000323668 DZIP1Q86YF9 867 aaKnown RBP16.8■□□□□ 0.28
TCOF1-201ENST00000323668 ZNF444Q8N0Y2 327 aaPredicted RBP16.8■□□□□ 0.28
TCOF1-201ENST00000323668 IKQ13123 557 aaPredicted RBP16.8■□□□□ 0.28
TCOF1-201ENST00000323668 PHKBQ93100 1093 aa16.8■□□□□ 0.28
TCOF1-201ENST00000323668 CARD6Q9BX69 1037 aa16.8■□□□□ 0.28
TCOF1-201ENST00000323668 PDE4BQ07343 736 aa16.8■□□□□ 0.28
TCOF1-201ENST00000323668 DIS3L2Q8IYB7 885 aaKnown RBP16.8■□□□□ 0.28
TCOF1-201ENST00000323668 MLKLQ8NB16 471 aa16.8■□□□□ 0.28
TCOF1-201ENST00000323668 TRIM47Q96LD4 638 aa16.8■□□□□ 0.28
TCOF1-201ENST00000323668 KIAA0754O94854 1291 aa16.8■□□□□ 0.28
TCOF1-201ENST00000323668 PHKG2P15735 406 aa16.8■□□□□ 0.28
TCOF1-201ENST00000323668 PAFAH1B1P43034 410 aa16.8■□□□□ 0.28
TCOF1-201ENST00000323668 AKR1B15C9JRZ8 316 aaPredicted RBP16.79■□□□□ 0.28
TCOF1-201ENST00000323668 MBD4O95243 580 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 PFKFB1P16118 471 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 CDC25BP30305 580 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 TUBB4BP68371 445 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 CACNA2D4Q7Z3S7 1137 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 FBXO18Q8NFZ0 1043 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 SEC63Q9UGP8 760 aaKnown RBP16.79■□□□□ 0.28
TCOF1-201ENST00000323668 MYO6Q9UM54 1294 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 CRB1P82279 1406 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 NFE2L3Q9Y4A8 694 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 A0A1W2PQ27 194 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 A0A1W2PQ64 194 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 A0A1W2PQD8 194 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 POLR2DO15514 142 aaKnown RBP16.79■□□□□ 0.28
TCOF1-201ENST00000323668 RBM6P78332 1123 aaKnown RBP16.79■□□□□ 0.28
TCOF1-201ENST00000323668 ARHGEF25Q86VW2 580 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 EHBP1Q8NDI1 1231 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 SMARCC1Q92922 1105 aaPredicted RBP16.79■□□□□ 0.28
TCOF1-201ENST00000323668 PCDH11XQ9BZA7 1347 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 PCDH11YQ9BZA8 1340 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 FGFR1OPO95684 399 aaKnown RBP16.79■□□□□ 0.28
TCOF1-201ENST00000323668 CMA1P23946 247 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 NDUFA8P51970 172 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 ZKSCAN3Q9BRR0 538 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 RTEL1Q9NZ71 1219 aa16.79■□□□□ 0.28
TCOF1-201ENST00000323668 NEXMIFQ5QGS0 1516 aa16.78■□□□□ 0.28
TCOF1-201ENST00000323668 ITGA6P23229 1130 aa16.78■□□□□ 0.28
TCOF1-201ENST00000323668 RESTQ13127 1097 aa16.78■□□□□ 0.28
TCOF1-201ENST00000323668 TRIM21P19474 475 aaKnown RBP16.78■□□□□ 0.28
TCOF1-201ENST00000323668 ZNF569Q5MCW4 686 aa16.78■□□□□ 0.28
TCOF1-201ENST00000323668 MIGA1Q8NAN2 632 aa16.78■□□□□ 0.28
TCOF1-201ENST00000323668 KAT14Q9H8E8 782 aa16.78■□□□□ 0.28
TCOF1-201ENST00000323668 C11orf57Q6ZUT1 292 aaPredicted RBP16.78■□□□□ 0.28
TCOF1-201ENST00000323668 FGAP02671 866 aa16.77■□□□□ 0.28
TCOF1-201ENST00000323668 PIP4K2BP78356 416 aa16.77■□□□□ 0.28
TCOF1-201ENST00000323668 SPECC1Q5M775 1068 aa16.77■□□□□ 0.28
TCOF1-201ENST00000323668 PUF60Q9UHX1 559 aaKnown RBP16.77■□□□□ 0.28
TCOF1-201ENST00000323668 DEXIO95424 95 aa16.77■□□□□ 0.28
TCOF1-201ENST00000323668 STAT6P42226 847 aa16.77■□□□□ 0.28
TCOF1-201ENST00000323668 AMPD3Q01432 767 aa16.77■□□□□ 0.28
TCOF1-201ENST00000323668 ZMYM1Q5SVZ6 1142 aa16.77■□□□□ 0.28
TCOF1-201ENST00000323668 CNGA4Q8IV77 575 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 696.2 ms