RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 POLR2AP24928 1970 aaKnown RBP27.23■■□□□ 1.95
HOXD4-201ENST00000306324 MMP14P50281 582 aa27.23■■□□□ 1.95
HOXD4-201ENST00000306324 SPTY2D1Q68D10 685 aaPredicted RBP27.23■■□□□ 1.95
HOXD4-201ENST00000306324 USP50Q70EL3 339 aaPredicted RBP27.23■■□□□ 1.95
HOXD4-201ENST00000306324 MAST3O60307 1309 aa27.22■■□□□ 1.95
HOXD4-201ENST00000306324 TTC41PQ6P2S7 1318 aa27.22■■□□□ 1.95
HOXD4-201ENST00000306324 DOCK2Q92608 1830 aa27.22■■□□□ 1.95
HOXD4-201ENST00000306324 RBM5P52756 815 aaKnown RBP eCLIP27.22■■□□□ 1.95
HOXD4-201ENST00000306324 ERICH6Q7L0X2 663 aa27.22■■□□□ 1.95
HOXD4-201ENST00000306324 CENPQQ7L2Z9 268 aaPredicted RBP27.22■■□□□ 1.95
HOXD4-201ENST00000306324 LRP2BPQ9P2M1 347 aa27.22■■□□□ 1.95
HOXD4-201ENST00000306324 ECM29Q5VYK3 1845 aa27.22■■□□□ 1.95
HOXD4-201ENST00000306324 POTEIP0CG38 1075 aa27.21■■□□□ 1.95
HOXD4-201ENST00000306324 POTEJP0CG39 1038 aa27.21■■□□□ 1.95
HOXD4-201ENST00000306324 DZIP1Q86YF9 867 aaKnown RBP27.21■■□□□ 1.95
HOXD4-201ENST00000306324 PPP4R2Q9NY27 417 aa27.21■■□□□ 1.95
HOXD4-201ENST00000306324 CLEC11AQ9Y240 323 aa27.21■■□□□ 1.95
HOXD4-201ENST00000306324 SALL3Q9BXA9 1300 aa27.21■■□□□ 1.95
HOXD4-201ENST00000306324 HIRAP54198 1017 aaPredicted RBP27.2■■□□□ 1.95
HOXD4-201ENST00000306324 ANTXR1Q9H6X2 564 aa27.2■■□□□ 1.95
HOXD4-201ENST00000306324 RAI14Q9P0K7 980 aa27.2■■□□□ 1.95
HOXD4-201ENST00000306324 MAST2Q6P0Q8 1798 aa27.2■■□□□ 1.94
HOXD4-201ENST00000306324 MYH7P12883 1935 aa27.2■■□□□ 1.94
HOXD4-201ENST00000306324 GOLIM4O00461 696 aa27.19■■□□□ 1.94
HOXD4-201ENST00000306324 ERC2O15083 957 aa27.19■■□□□ 1.94
HOXD4-201ENST00000306324 DLGAP5Q15398 846 aa27.19■■□□□ 1.94
HOXD4-201ENST00000306324 CFAP100Q494V2 611 aa27.19■■□□□ 1.94
HOXD4-201ENST00000306324 HAUS7Q99871 368 aa27.19■■□□□ 1.94
HOXD4-201ENST00000306324 PIH1D3Q9NQM4 214 aaKnown RBP27.19■■□□□ 1.94
HOXD4-201ENST00000306324 SERPINA10Q9UK55 444 aa27.19■■□□□ 1.94
HOXD4-201ENST00000306324 CRKP46108 304 aa27.19■■□□□ 1.94
HOXD4-201ENST00000306324 TEKT1Q969V4 418 aa27.19■■□□□ 1.94
HOXD4-201ENST00000306324 PCDHAC2Q9Y5I4 1007 aa27.19■■□□□ 1.94
HOXD4-201ENST00000306324 PDE1AP54750 535 aa27.18■■□□□ 1.94
HOXD4-201ENST00000306324 TTF1Q15361 905 aaPredicted RBP27.18■■□□□ 1.94
HOXD4-201ENST00000306324 DIXDC1Q155Q3 683 aa27.18■■□□□ 1.94
HOXD4-201ENST00000306324 EDC3Q96F86 508 aaKnown RBP27.18■■□□□ 1.94
HOXD4-201ENST00000306324 PAG1Q9NWQ8 432 aa27.18■■□□□ 1.94
HOXD4-201ENST00000306324 IDH1O75874 414 aaKnown RBP27.17■■□□□ 1.94
HOXD4-201ENST00000306324 GLRX3O76003 335 aaKnown RBP27.17■■□□□ 1.94
HOXD4-201ENST00000306324 HDLBPQ00341 1268 aaKnown RBP27.17■■□□□ 1.94
HOXD4-201ENST00000306324 MECOMQ03112 1051 aa27.17■■□□□ 1.94
HOXD4-201ENST00000306324 NBPF9Q3BBW0 867 aa27.17■■□□□ 1.94
HOXD4-201ENST00000306324 LDHDQ86WU2 507 aa27.17■■□□□ 1.94
HOXD4-201ENST00000306324 PI4K2BQ8TCG2 481 aa27.17■■□□□ 1.94
HOXD4-201ENST00000306324 WNT10BO00744 389 aa27.16■■□□□ 1.94
HOXD4-201ENST00000306324 STAP2Q9UGK3 403 aa27.16■■□□□ 1.94
HOXD4-201ENST00000306324 MTMR14Q8NCE2 650 aa27.15■■□□□ 1.94
HOXD4-201ENST00000306324 SPDYE2BA6NHP3 402 aa27.14■■□□□ 1.94
HOXD4-201ENST00000306324 TOMM70O94826 608 aa27.14■■□□□ 1.94
HOXD4-201ENST00000306324 MAP4K4O95819 1239 aaPredicted RBP27.14■■□□□ 1.94
HOXD4-201ENST00000306324 SPDYE6P0CI01 402 aa27.14■■□□□ 1.94
HOXD4-201ENST00000306324 HHIPL2Q6UWX4 724 aa27.14■■□□□ 1.94
HOXD4-201ENST00000306324 PLEKHM2Q8IWE5 1019 aa27.14■■□□□ 1.94
HOXD4-201ENST00000306324 NSUN4Q96CB9 384 aaKnown RBP27.14■■□□□ 1.94
HOXD4-201ENST00000306324 PRMT6Q96LA8 375 aaPredicted RBP27.14■■□□□ 1.94
HOXD4-201ENST00000306324 MRIQ9BWK5 157 aa27.14■■□□□ 1.94
HOXD4-201ENST00000306324 ASTN2O75129 1339 aaPredicted RBP27.14■■□□□ 1.94
HOXD4-201ENST00000306324 PDE4AP27815 886 aa27.13■■□□□ 1.93
HOXD4-201ENST00000306324 SLF2Q8IX21 1173 aa27.13■■□□□ 1.93
HOXD4-201ENST00000306324 AK9Q5TCS8 1911 aa27.13■■□□□ 1.93
HOXD4-201ENST00000306324 GSTO1P78417 241 aa27.13■■□□□ 1.93
HOXD4-201ENST00000306324 MAP3K12Q12852 859 aa27.13■■□□□ 1.93
HOXD4-201ENST00000306324 ZNF384Q8TF68 577 aa27.13■■□□□ 1.93
HOXD4-201ENST00000306324 ZC3H15Q8WU90 426 aaKnown RBP27.13■■□□□ 1.93
HOXD4-201ENST00000306324 ZBED3Q96IU2 234 aaPredicted RBP27.13■■□□□ 1.93
HOXD4-201ENST00000306324 ZDHHC15Q96MV8 337 aa27.13■■□□□ 1.93
HOXD4-201ENST00000306324 GGA3Q9NZ52 723 aa27.13■■□□□ 1.93
HOXD4-201ENST00000306324 DAGLAQ9Y4D2 1042 aa27.13■■□□□ 1.93
HOXD4-201ENST00000306324 MYO1BO43795 1136 aa27.12■■□□□ 1.93
HOXD4-201ENST00000306324 MAP1SQ66K74 1059 aaPredicted RBP27.12■■□□□ 1.93
HOXD4-201ENST00000306324 NAA16Q6N069 864 aaPredicted RBP27.12■■□□□ 1.93
HOXD4-201ENST00000306324 CHADLQ6NUI6 762 aa27.12■■□□□ 1.93
HOXD4-201ENST00000306324 AOX1Q06278 1338 aa27.11■■□□□ 1.93
HOXD4-201ENST00000306324 ANGEL2Q5VTE6 544 aaKnown RBP27.11■■□□□ 1.93
HOXD4-201ENST00000306324 RBM46Q8TBY0 533 aaKnown RBP27.11■■□□□ 1.93
HOXD4-201ENST00000306324 MROH7-TTC4A0A0A0MT08 1334 aa27.1■■□□□ 1.93
HOXD4-201ENST00000306324 LDHCP07864 332 aa27.1■■□□□ 1.93
HOXD4-201ENST00000306324 MAGEB6Q8N7X4 407 aa27.1■■□□□ 1.93
HOXD4-201ENST00000306324 SMC1BQ8NDV3 1235 aa27.1■■□□□ 1.93
HOXD4-201ENST00000306324 DCPSQ96C86 337 aaKnown RBP27.1■■□□□ 1.93
HOXD4-201ENST00000306324 TDRD3Q9H7E2 651 aaKnown RBP27.1■■□□□ 1.93
HOXD4-201ENST00000306324 PGAP2Q9UHJ9 254 aa27.1■■□□□ 1.93
HOXD4-201ENST00000306324 CLRN2A0PK11 232 aa27.09■■□□□ 1.93
HOXD4-201ENST00000306324 APOBEC3HQ6NTF7 200 aaKnown RBP27.09■■□□□ 1.93
HOXD4-201ENST00000306324 OSBPL3Q9H4L5 887 aa27.09■■□□□ 1.93
HOXD4-201ENST00000306324 GAKO14976 1311 aa27.08■■□□□ 1.93
HOXD4-201ENST00000306324 IGSF3O75054 1194 aa27.08■■□□□ 1.93
HOXD4-201ENST00000306324 FAM163AQ96GL9 167 aaPredicted RBP27.08■■□□□ 1.93
HOXD4-201ENST00000306324 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.08■■□□□ 1.93
HOXD4-201ENST00000306324 CYP7A1P22680 504 aa27.07■■□□□ 1.92
HOXD4-201ENST00000306324 SLC9C2Q5TAH2 1124 aa27.07■■□□□ 1.92
HOXD4-201ENST00000306324 VEZTQ9HBM0 779 aa27.07■■□□□ 1.92
HOXD4-201ENST00000306324 SCAF8Q9UPN6 1271 aaKnown RBP27.07■■□□□ 1.92
HOXD4-201ENST00000306324 BTDP43251 543 aa27.06■■□□□ 1.92
HOXD4-201ENST00000306324 CNTROBQ8N137 903 aa27.06■■□□□ 1.92
HOXD4-201ENST00000306324 PDE6AP16499 860 aa27.06■■□□□ 1.92
HOXD4-201ENST00000306324 ADGRA1Q86SQ6 560 aa27.06■■□□□ 1.92
HOXD4-201ENST00000306324 KBTBD3Q8NAB2 608 aa27.06■■□□□ 1.92
HOXD4-201ENST00000306324 NOL10Q9BSC4 688 aaKnown RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms