RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 KIFAP3Q92845 792 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 B4DLN1 442 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 GRM8O00222 908 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 MRPL12P52815 198 aaKnown RBP8.6□□□□□ -1.03
SF3B3-201ENST00000302516 NME9Q86XW9 330 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 DRC1Q96MC2 740 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 DCTPP1Q9H773 170 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 CABP5Q9NP86 173 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 MAP3K5Q99683 1374 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 GOLGA6CA6NDK9 693 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 GOLGA6DP0CG33 693 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 WDR78Q5VTH9 848 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 KRBA2Q6ZNG9 492 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 GOLGA6AQ9NYA3 693 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 MSH6P52701 1360 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 PLCD1P51178 756 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 CCDC122Q5T0U0 273 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 RRP36Q96EU6 259 aaKnown RBP8.59□□□□□ -1.03
SF3B3-201ENST00000302516 CFAP157Q5JU67 520 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 CCDC144CPQ8IYA2 1237 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 PANK2Q9BZ23 570 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 GLT8D2Q9H1C3 349 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 EVCP57679 992 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 DHX32Q7L7V1 743 aaKnown RBP8.59□□□□□ -1.03
SF3B3-201ENST00000302516 ZNF830Q96NB3 372 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-201ENST00000302516 SAMM50Q9Y512 469 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 EMILIN1Q9Y6C2 1016 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 RIMS2Q9UQ26 1411 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 GMNNO75496 209 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 LMOD1P29536 600 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-201ENST00000302516 CNGA1P29973 690 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 PHLDB2Q86SQ0 1253 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 IFNL2Q8IZJ0 200 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 SYCE1Q8N0S2 351 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 AFAP1L2Q8N4X5 818 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 ZFP91Q96JP5 570 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-201ENST00000302516 HELLSQ9NRZ9 838 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 ATP6V0A2Q9Y487 856 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 ZWINTO95229 277 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 CAPZA3Q96KX2 299 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 NOX5Q96PH1 765 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 ZEB2O60315 1214 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 BUB1BO60566 1050 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-201ENST00000302516 INPP5BP32019 993 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 RILPL1Q5EBL4 403 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 SH2D4BQ5SQS7 431 aa8.59□□□□□ -1.03
SF3B3-201ENST00000302516 SEC62Q99442 399 aaKnown RBP8.59□□□□□ -1.03
SF3B3-201ENST00000302516 FLT4P35916 1363 aa8.59□□□□□ -1.04
SF3B3-201ENST00000302516 CREB3L3Q68CJ9 461 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 CCDC82Q8N4S0 544 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 USP26Q9BXU7 913 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 CLSTN2Q9H4D0 955 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 PI4KAP2A4QPH2 592 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 PI4KAP1Q8N8J0 262 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 GABPB2Q8TAK5 448 aaPredicted RBP8.58□□□□□ -1.04
SF3B3-201ENST00000302516 CCDC85AQ96PX6 553 aaPredicted RBP8.58□□□□□ -1.04
SF3B3-201ENST00000302516 FRMD4BQ9Y2L6 1034 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 TRAPPC8Q9Y2L5 1435 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 SETD1BQ9UPS6 1966 aaKnown RBP8.58□□□□□ -1.04
SF3B3-201ENST00000302516 RNF113AO15541 343 aaKnown RBP8.58□□□□□ -1.04
SF3B3-201ENST00000302516 NAPAP54920 295 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 PPP2R5EQ16537 467 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 C8orf74Q6P047 294 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 UBLCP1Q8WVY7 318 aaPredicted RBP8.58□□□□□ -1.04
SF3B3-201ENST00000302516 TXNDC16Q9P2K2 825 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 GAS8O95995 478 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 NAA25Q14CX7 972 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 CCDC62Q6P9F0 684 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 HEATR3Q7Z4Q2 680 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 NUCKS1Q9H1E3 243 aaKnown RBP8.58□□□□□ -1.04
SF3B3-201ENST00000302516 BICRAQ9NZM4 1560 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 ATP2C2O75185 946 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 CCDC38Q502W7 563 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 HS2ST1Q7LGA3 356 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 ARHGAP6O43182 974 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 AK2P54819 239 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 MAP7Q14244 749 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 SYT10Q6XYQ8 523 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 ANKRD13DQ6ZTN6 518 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 BABAM1Q9NWV8 329 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 MRVI1Q9Y6F6 885 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 TRPC3Q13507 836 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 GOLGA6BA6NDN3 693 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 FAM13AO94988 1023 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 HAND2P61296 217 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 KRT79Q5XKE5 535 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 MPRIPQ6WCQ1 1025 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 ZNF804AQ7Z570 1209 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 LZTFL1Q9NQ48 299 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 PCDHB15Q9Y5E8 787 aa8.58□□□□□ -1.04
SF3B3-201ENST00000302516 RHOXF2BP0C7M4 288 aa8.57□□□□□ -1.04
SF3B3-201ENST00000302516 RASSF2P50749 326 aa8.57□□□□□ -1.04
SF3B3-201ENST00000302516 NMIQ13287 307 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-201ENST00000302516 LDHAL6AQ6ZMR3 332 aa8.57□□□□□ -1.04
SF3B3-201ENST00000302516 RHOXF2Q9BQY4 288 aa8.57□□□□□ -1.04
SF3B3-201ENST00000302516 ZNF75DP51815 510 aa8.57□□□□□ -1.04
SF3B3-201ENST00000302516 KSR2Q6VAB6 950 aa8.57□□□□□ -1.04
SF3B3-201ENST00000302516 ODF2LQ9ULJ1 636 aa8.57□□□□□ -1.04
SF3B3-201ENST00000302516 EPB41P11171 864 aaKnown RBP8.57□□□□□ -1.04
SF3B3-201ENST00000302516 TMTC1Q8IUR5 882 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms